RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 INF2Q27J81 1249 aa12.22□□□□□ -0.45
PDXDC1-214ENST00000566633 HSP90AA4PQ58FG1 418 aa12.22□□□□□ -0.45
PDXDC1-214ENST00000566633 FAM83BQ5T0W9 1011 aa12.22□□□□□ -0.45
PDXDC1-214ENST00000566633 TRMT44Q8IYL2 757 aaKnown RBP12.22□□□□□ -0.45
PDXDC1-214ENST00000566633 PPP1R13BQ96KQ4 1090 aa12.22□□□□□ -0.45
PDXDC1-214ENST00000566633 KIF2AO00139 706 aaPredicted RBP12.21□□□□□ -0.45
PDXDC1-214ENST00000566633 BMP3P12645 472 aa12.21□□□□□ -0.45
PDXDC1-214ENST00000566633 CDK11BP21127 795 aaKnown RBP12.21□□□□□ -0.45
PDXDC1-214ENST00000566633 TBX2Q13207 712 aaPredicted RBP12.21□□□□□ -0.45
PDXDC1-214ENST00000566633 SYCP1Q15431 976 aa12.21□□□□□ -0.45
PDXDC1-214ENST00000566633 E2F4Q16254 413 aa12.21□□□□□ -0.45
PDXDC1-214ENST00000566633 QRICH1Q2TAL8 776 aa12.21□□□□□ -0.45
PDXDC1-214ENST00000566633 C4orf32Q8N8J7 132 aa12.21□□□□□ -0.45
PDXDC1-214ENST00000566633 GSDMAQ96QA5 445 aa12.21□□□□□ -0.45
PDXDC1-214ENST00000566633 ZNF341Q9BYN7 854 aa12.21□□□□□ -0.45
PDXDC1-214ENST00000566633 ZMYND12Q9H0C1 365 aa12.21□□□□□ -0.45
PDXDC1-214ENST00000566633 ARHGEF10LQ9HCE6 1279 aa12.21□□□□□ -0.45
PDXDC1-214ENST00000566633 SAMSN1Q9NSI8 373 aaKnown RBP12.21□□□□□ -0.45
PDXDC1-214ENST00000566633 MYH8P13535 1937 aa12.21□□□□□ -0.45
PDXDC1-214ENST00000566633 COL2A1P02458 1487 aaPredicted RBP12.21□□□□□ -0.46
PDXDC1-214ENST00000566633 M0R2N6 131 aa12.21□□□□□ -0.46
PDXDC1-214ENST00000566633 CASP1P29466 404 aa12.21□□□□□ -0.46
PDXDC1-214ENST00000566633 UBE2SQ16763 222 aa12.21□□□□□ -0.46
PDXDC1-214ENST00000566633 PTPN21Q16825 1174 aa12.21□□□□□ -0.46
PDXDC1-214ENST00000566633 USH1GQ495M9 461 aa12.21□□□□□ -0.46
PDXDC1-214ENST00000566633 TMX2Q9Y320 296 aa12.21□□□□□ -0.46
PDXDC1-214ENST00000566633 ARFGEF1Q9Y6D6 1849 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 PNMA6FA0A0J9YX94 578 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 CCDC194A0A1B0GVG4 234 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 ZBTB5O15062 677 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 CD44P16070 742 aaKnown RBP12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 SMARCA1P28370 1054 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 MAP3K10Q02779 954 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 CUL4BQ13620 913 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 CDC37Q16543 378 aaPredicted RBP12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 ARL6IP4Q66PJ3 421 aaKnown RBP12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 IQUBQ8NA54 791 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 GMCL1P1Q8NEA9 526 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 CCDC148Q8NFR7 591 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 KIF18AQ8NI77 898 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 DCAF4Q8WV16 495 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 FBXO28Q9NVF7 368 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 ASNSP08243 561 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 NR1I3Q14994 352 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 PPP4R3BQ5MIZ7 849 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 KIFC2Q96AC6 838 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 FEZ1Q99689 392 aa12.2□□□□□ -0.46
PDXDC1-214ENST00000566633 PPP1R3GB7ZBB8 358 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 GOLGA8FQ08AF8 430 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 NCBP1Q09161 790 aaKnown RBP12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 GOLGA8DPQ0D2H9 430 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 SPATA1Q5VX52 437 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 PDXDC2PQ6P474 469 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 WRNIP1Q96S55 665 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 C6orf50Q9HD87 102 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 PCDHA1Q9Y5I3 950 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 USP17L15C9J2P7 530 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 USP17L13C9JLJ4 530 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 ADM5C9JUS6 153 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 USP17L11C9JVI0 530 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 USP17L18D6R9N7 530 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 USP17L22D6RA61 530 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 USP17L17D6RBQ6 530 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 USP17L19D6RCP7 530 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 USP17L20D6RJB6 530 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 CDC25AP30304 524 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 USP17L24Q0WX57 530 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 LETM2Q2VYF4 491 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 SPECC1LQ69YQ0 1117 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 USP17L6PQ6QN14 398 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 TMEM139Q8IV31 216 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 GMCL1Q96IK5 515 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 UIMC1Q96RL1 719 aa12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 PYM1Q9BRP8 204 aaKnown RBP12.19□□□□□ -0.46
PDXDC1-214ENST00000566633 TUBB4AP04350 444 aa12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 GNA11P29992 359 aa12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 LONP1P36776 959 aaKnown RBP12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 GALNT17Q6IS24 598 aa12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 APTXQ7Z2E3 356 aaKnown RBP12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 DAGLBQ8NCG7 672 aa12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 MTRQ99707 1265 aa12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 VCPKMTQ9H867 229 aa12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 PRR12Q9ULL5 1215 aa12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 GREB1LQ9C091 1923 aaPredicted RBP12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 A0A1B0GTH6 734 aa12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 CCP110O43303 1012 aa12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 MMP14P50281 582 aa12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 SYDE2Q5VT97 1194 aa12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 CCDC174Q6PII3 467 aa12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 TBCKQ8TEA7 893 aa12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 CCDC12Q8WUD4 166 aaPredicted RBP12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 STAMQ92783 540 aa12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 MTMR8Q96EF0 704 aa12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 GOPCQ9HD26 462 aa12.18□□□□□ -0.46
PDXDC1-214ENST00000566633 MYH4Q9Y623 1939 aa12.17□□□□□ -0.46
PDXDC1-214ENST00000566633 STAT2P52630 851 aa12.17□□□□□ -0.46
PDXDC1-214ENST00000566633 SPP2Q13103 211 aa12.17□□□□□ -0.46
PDXDC1-214ENST00000566633 NAA30Q147X3 362 aaPredicted RBP12.17□□□□□ -0.46
PDXDC1-214ENST00000566633 CDKAL1Q5VV42 579 aa12.17□□□□□ -0.46
PDXDC1-214ENST00000566633 KLHL10Q6JEL2 608 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms