RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 NFIBO00712 420 aa13.67□□□□□ -0.22
NSMCE1-209ENST00000565384 FGRP09769 529 aa13.67□□□□□ -0.22
NSMCE1-209ENST00000565384 RRP12Q5JTH9 1297 aaKnown RBP13.67□□□□□ -0.22
NSMCE1-209ENST00000565384 SYDE2Q5VT97 1194 aa13.67□□□□□ -0.22
NSMCE1-209ENST00000565384 EVI5LQ96CN4 794 aa13.67□□□□□ -0.22
NSMCE1-209ENST00000565384 SCLYQ96I15 445 aa13.67□□□□□ -0.22
NSMCE1-209ENST00000565384 TMEM47Q9BQJ4 181 aa13.67□□□□□ -0.22
NSMCE1-209ENST00000565384 SLC28A3Q9HAS3 691 aa13.67□□□□□ -0.22
NSMCE1-209ENST00000565384 GBF1Q92538 1859 aa13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 LOC102724159A0A0B4J2E5 919 aa13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 TNFRSF10AO00220 468 aa13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 TOP1P11387 765 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 IGFBP4P22692 258 aa13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 RABGGTBP53611 331 aa13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 PURAQ00577 322 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 PWP2Q15269 919 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 ALX1Q15699 326 aa13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 SLC30A10Q6XR72 485 aa13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 RPUSD2Q8IZ73 545 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 ATXN2LQ8WWM7 1075 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 WDR11Q9BZH6 1224 aa13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 GPCPD1Q9NPB8 672 aa13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 HELLSQ9NRZ9 838 aa13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 TRMT13Q9NUP7 481 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 POLR3EQ9NVU0 708 aa13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 ZBTB47Q9UFB7 747 aaPredicted RBP13.66□□□□□ -0.22
NSMCE1-209ENST00000565384 TNKSO95271 1327 aa13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 RBM47A0AV96 593 aaKnown RBP13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 ZBBXA8MT70 800 aa13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 FGAP02671 866 aa13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 MYL3P08590 195 aa13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 SUPT20HL2P0C7V6 817 aa13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 PDHBP11177 359 aa13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 CYP2C9P11712 490 aa13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 CALML3P27482 149 aa13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 CPT1AP50416 773 aa13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 CCDC85BQ15834 202 aaPredicted RBP13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 PPP2R2DQ66LE6 453 aa13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 OR6J1Q8NGC5 347 aa13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 CLEC4DQ8WXI8 215 aa13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 VWCEQ96DN2 955 aa13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 FAM227BQ96M60 508 aa13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 TCP11L1Q9NUJ3 509 aa13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 SLC4A7Q9Y6M7 1214 aa13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 PRUNE2Q8WUY3 3088 aa13.65□□□□□ -0.22
NSMCE1-209ENST00000565384 A0A0D9SFI3 127 aa13.64□□□□□ -0.23
NSMCE1-209ENST00000565384 PFKMP08237 780 aa13.64□□□□□ -0.23
NSMCE1-209ENST00000565384 MYOGP15173 224 aa13.64□□□□□ -0.23
NSMCE1-209ENST00000565384 MCMDC2Q4G0Z9 681 aa13.64□□□□□ -0.23
NSMCE1-209ENST00000565384 ANKRD45Q5TZF3 282 aa13.64□□□□□ -0.23
NSMCE1-209ENST00000565384 RNF207Q6ZRF8 634 aa13.64□□□□□ -0.23
NSMCE1-209ENST00000565384 ASB2Q96Q27 587 aa13.64□□□□□ -0.23
NSMCE1-209ENST00000565384 MTG1Q9BT17 334 aaPredicted RBP13.64□□□□□ -0.23
NSMCE1-209ENST00000565384 GPHNQ9NQX3 736 aaPredicted RBP13.64□□□□□ -0.23
NSMCE1-209ENST00000565384 PNMA2Q9UL42 364 aa13.64□□□□□ -0.23
NSMCE1-209ENST00000565384 PCDHA11Q9Y5I1 949 aa13.64□□□□□ -0.23
NSMCE1-209ENST00000565384 ZMYM6O95789 1325 aa13.64□□□□□ -0.23
NSMCE1-209ENST00000565384 HSPD1P10809 573 aaKnown RBP13.63□□□□□ -0.23
NSMCE1-209ENST00000565384 ATP2A2P16615 1042 aaKnown RBP13.63□□□□□ -0.23
NSMCE1-209ENST00000565384 PDE1AP54750 535 aa13.63□□□□□ -0.23
NSMCE1-209ENST00000565384 RPS6P62753 249 aaKnown RBP13.63□□□□□ -0.23
NSMCE1-209ENST00000565384 PDE4DQ08499 809 aa13.63□□□□□ -0.23
NSMCE1-209ENST00000565384 ZNF543Q08ER8 600 aa13.63□□□□□ -0.23
NSMCE1-209ENST00000565384 TTLL4Q14679 1199 aa13.63□□□□□ -0.23
NSMCE1-209ENST00000565384 PPP2R5BQ15173 497 aa13.63□□□□□ -0.23
NSMCE1-209ENST00000565384 FAM47CQ5HY64 1035 aa13.63□□□□□ -0.23
NSMCE1-209ENST00000565384 DEFB128Q7Z7B8 93 aa13.63□□□□□ -0.23
NSMCE1-209ENST00000565384 ZNF589Q86UQ0 364 aaPredicted RBP13.63□□□□□ -0.23
NSMCE1-209ENST00000565384 MPHOSPH6Q99547 160 aaKnown RBP13.63□□□□□ -0.23
NSMCE1-209ENST00000565384 WDR19Q8NEZ3 1342 aa13.63□□□□□ -0.23
NSMCE1-209ENST00000565384 RAD50Q92878 1312 aa13.63□□□□□ -0.23
NSMCE1-209ENST00000565384 NKRFO15226 690 aaKnown RBP eCLIP13.62□□□□□ -0.23
NSMCE1-209ENST00000565384 SNHG28P0DPA3 235 aa13.62□□□□□ -0.23
NSMCE1-209ENST00000565384 EDNRBP24530 442 aa13.62□□□□□ -0.23
NSMCE1-209ENST00000565384 HAND2P61296 217 aa13.62□□□□□ -0.23
NSMCE1-209ENST00000565384 MRPS5P82675 430 aaKnown RBP13.62□□□□□ -0.23
NSMCE1-209ENST00000565384 NBPF20Q3BBV1 942 aa13.62□□□□□ -0.23
NSMCE1-209ENST00000565384 BRDTQ58F21 947 aaPredicted RBP13.62□□□□□ -0.23
NSMCE1-209ENST00000565384 MICALL1Q8N3F8 863 aa13.62□□□□□ -0.23
NSMCE1-209ENST00000565384 DNERQ8NFT8 737 aa13.62□□□□□ -0.23
NSMCE1-209ENST00000565384 ADAMTS19Q8TE59 1207 aa13.62□□□□□ -0.23
NSMCE1-209ENST00000565384 COPS5Q92905 334 aa13.62□□□□□ -0.23
NSMCE1-209ENST00000565384 PCP11498 1178 aaKnown RBP13.61□□□□□ -0.23
NSMCE1-209ENST00000565384 ACTN1P12814 892 aa13.61□□□□□ -0.23
NSMCE1-209ENST00000565384 RFC2P35250 354 aa13.61□□□□□ -0.23
NSMCE1-209ENST00000565384 NMIQ13287 307 aaPredicted RBP13.61□□□□□ -0.23
NSMCE1-209ENST00000565384 NFRKBQ6P4R8 1299 aa13.61□□□□□ -0.23
NSMCE1-209ENST00000565384 MFSD6Q6ZSS7 791 aa13.61□□□□□ -0.23
NSMCE1-209ENST00000565384 TBC1D10CQ8IV04 446 aa13.61□□□□□ -0.23
NSMCE1-209ENST00000565384 IL27Q8NEV9 243 aa13.61□□□□□ -0.23
NSMCE1-209ENST00000565384 SCFD2Q8WU76 684 aa13.61□□□□□ -0.23
NSMCE1-209ENST00000565384 PPP1R13LQ8WUF5 828 aa13.61□□□□□ -0.23
NSMCE1-209ENST00000565384 TTC14Q96N46 770 aa13.61□□□□□ -0.23
NSMCE1-209ENST00000565384 SCN10AQ9Y5Y9 1956 aa13.61□□□□□ -0.23
NSMCE1-209ENST00000565384 CCDC171Q6TFL3 1326 aa13.61□□□□□ -0.23
NSMCE1-209ENST00000565384 A6NJR5 290 aa13.6□□□□□ -0.23
NSMCE1-209ENST00000565384 KPNA6O60684 536 aa13.6□□□□□ -0.23
NSMCE1-209ENST00000565384 ARIH2O95376 493 aa13.6□□□□□ -0.23
NSMCE1-209ENST00000565384 CA3P07451 260 aa13.6□□□□□ -0.23
NSMCE1-209ENST00000565384 IQCF3P0C7M6 154 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms