RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 LBHD1Q9BQE6 289 aaPredicted RBP17.23■□□□□ 0.35
USB1-210ENST00000565151 KRT23Q9C075 422 aa17.23■□□□□ 0.35
USB1-210ENST00000565151 KAT14Q9H8E8 782 aa17.23■□□□□ 0.35
USB1-210ENST00000565151 JMJD4Q9H9V9 463 aa17.23■□□□□ 0.35
USB1-210ENST00000565151 SCN5AQ14524 2016 aa17.23■□□□□ 0.35
USB1-210ENST00000565151 RBM47A0AV96 593 aaKnown RBP17.22■□□□□ 0.35
USB1-210ENST00000565151 PTPDC1A2A3K4 754 aa17.22■□□□□ 0.35
USB1-210ENST00000565151 OPLAHO14841 1288 aa17.22■□□□□ 0.35
USB1-210ENST00000565151 DYNC1LI2O43237 492 aaPredicted RBP17.22■□□□□ 0.35
USB1-210ENST00000565151 PPP1R11O60927 126 aaPredicted RBP17.22■□□□□ 0.35
USB1-210ENST00000565151 EDNRBP24530 442 aa17.22■□□□□ 0.35
USB1-210ENST00000565151 NT5C2P49902 561 aa17.22■□□□□ 0.35
USB1-210ENST00000565151 ANTXR2P58335 489 aa17.22■□□□□ 0.35
USB1-210ENST00000565151 QRICH1Q2TAL8 776 aa17.22■□□□□ 0.35
USB1-210ENST00000565151 IQSEC1Q6DN90 963 aa17.22■□□□□ 0.35
USB1-210ENST00000565151 CXCL17Q6UXB2 119 aa17.22■□□□□ 0.35
USB1-210ENST00000565151 RNF207Q6ZRF8 634 aa17.22■□□□□ 0.35
USB1-210ENST00000565151 CHST3Q7LGC8 479 aa17.22■□□□□ 0.35
USB1-210ENST00000565151 TBX21Q9UL17 535 aa17.22■□□□□ 0.35
USB1-210ENST00000565151 PRUNE2Q8WUY3 3088 aa17.22■□□□□ 0.35
USB1-210ENST00000565151 DOCK5Q9H7D0 1870 aa17.22■□□□□ 0.35
USB1-210ENST00000565151 TRIP12Q14669 1992 aaPredicted RBP17.22■□□□□ 0.35
USB1-210ENST00000565151 UNC80Q8N2C7 3258 aa17.22■□□□□ 0.35
USB1-210ENST00000565151 ELP1O95163 1332 aa17.21■□□□□ 0.35
USB1-210ENST00000565151 E7EWF7 191 aa17.21■□□□□ 0.35
USB1-210ENST00000565151 SLC43A3Q8NBI5 491 aa17.21■□□□□ 0.35
USB1-210ENST00000565151 NUP133Q8WUM0 1156 aa17.21■□□□□ 0.35
USB1-210ENST00000565151 MAP4K1Q92918 833 aa17.21■□□□□ 0.35
USB1-210ENST00000565151 TOX2Q96NM4 488 aa17.21■□□□□ 0.35
USB1-210ENST00000565151 CNNM2Q9H8M5 875 aa17.21■□□□□ 0.35
USB1-210ENST00000565151 VAT1LQ9HCJ6 419 aa17.21■□□□□ 0.35
USB1-210ENST00000565151 VTA1Q9NP79 307 aa17.21■□□□□ 0.35
USB1-210ENST00000565151 GPHNQ9NQX3 736 aaPredicted RBP17.21■□□□□ 0.35
USB1-210ENST00000565151 PRKAG2Q9UGJ0 569 aa17.21■□□□□ 0.35
USB1-210ENST00000565151 MAD2L2Q9UI95 211 aa17.21■□□□□ 0.35
USB1-210ENST00000565151 PALM3A6NDB9 673 aaPredicted RBP17.2■□□□□ 0.34
USB1-210ENST00000565151 ARVCFO00192 962 aa17.2■□□□□ 0.34
USB1-210ENST00000565151 CD4P01730 458 aa17.2■□□□□ 0.34
USB1-210ENST00000565151 FSCN1Q16658 493 aaKnown RBP17.2■□□□□ 0.34
USB1-210ENST00000565151 ASPRV1Q53RT3 343 aa17.2■□□□□ 0.34
USB1-210ENST00000565151 CCDC178Q5BJE1 867 aa17.2■□□□□ 0.34
USB1-210ENST00000565151 IFIT1BQ5T764 474 aaKnown RBP17.2■□□□□ 0.34
USB1-210ENST00000565151 KIAA1211Q6ZU35 1233 aa17.2■□□□□ 0.34
USB1-210ENST00000565151 FAM126BQ8IXS8 530 aa17.2■□□□□ 0.34
USB1-210ENST00000565151 PCSK9Q8NBP7 692 aaKnown RBP17.2■□□□□ 0.34
USB1-210ENST00000565151 MTMR8Q96EF0 704 aa17.2■□□□□ 0.34
USB1-210ENST00000565151 GLT1D1Q96MS3 346 aa17.2■□□□□ 0.34
USB1-210ENST00000565151 ARIH2O95376 493 aa17.19■□□□□ 0.34
USB1-210ENST00000565151 PARP1P09874 1014 aaKnown RBP17.19■□□□□ 0.34
USB1-210ENST00000565151 PSMC6P62333 389 aa17.19■□□□□ 0.34
USB1-210ENST00000565151 DUSP28Q4G0W2 176 aa17.19■□□□□ 0.34
USB1-210ENST00000565151 GPR153Q6NV75 609 aa17.19■□□□□ 0.34
USB1-210ENST00000565151 NOL8Q76FK4 1167 aaKnown RBP17.19■□□□□ 0.34
USB1-210ENST00000565151 RGS22Q8NE09 1264 aa17.19■□□□□ 0.34
USB1-210ENST00000565151 SYTL5Q8TDW5 730 aaPredicted RBP17.19■□□□□ 0.34
USB1-210ENST00000565151 COPS5Q92905 334 aa17.19■□□□□ 0.34
USB1-210ENST00000565151 TAAR1Q96RJ0 339 aa17.19■□□□□ 0.34
USB1-210ENST00000565151 UBAC1Q9BSL1 405 aa17.19■□□□□ 0.34
USB1-210ENST00000565151 LSG1Q9H089 658 aaKnown RBP17.19■□□□□ 0.34
USB1-210ENST00000565151 TMEM39AQ9NV64 488 aa17.19■□□□□ 0.34
USB1-210ENST00000565151 MTMR10Q9NXD2 777 aa17.19■□□□□ 0.34
USB1-210ENST00000565151 RBM8AQ9Y5S9 174 aaKnown RBP17.19■□□□□ 0.34
USB1-210ENST00000565151 U3KPZ7 1027 aaPredicted RBP17.19■□□□□ 0.34
USB1-210ENST00000565151 KLRF2D3W0D1 207 aa17.18■□□□□ 0.34
USB1-210ENST00000565151 CYTH3O43739 400 aa17.18■□□□□ 0.34
USB1-210ENST00000565151 C16orf59Q7L2K0 433 aa17.18■□□□□ 0.34
USB1-210ENST00000565151 MB21D2Q8IYB1 491 aaPredicted RBP17.18■□□□□ 0.34
USB1-210ENST00000565151 DEFB123Q8N688 67 aa17.18■□□□□ 0.34
USB1-210ENST00000565151 IGDCC4Q8TDY8 1250 aa17.18■□□□□ 0.34
USB1-210ENST00000565151 PPP1R13LQ8WUF5 828 aa17.18■□□□□ 0.34
USB1-210ENST00000565151 RUFY2Q8WXA3 655 aa17.18■□□□□ 0.34
USB1-210ENST00000565151 WDR11Q9BZH6 1224 aa17.18■□□□□ 0.34
USB1-210ENST00000565151 SPC25Q9HBM1 224 aa17.18■□□□□ 0.34
USB1-210ENST00000565151 ADD3Q9UEY8 706 aaKnown RBP17.18■□□□□ 0.34
USB1-210ENST00000565151 Q9Y3F1 56 aa17.18■□□□□ 0.34
USB1-210ENST00000565151 A0A0C4DFX4 3053 aa17.17■□□□□ 0.34
USB1-210ENST00000565151 LOC102724159A0A0B4J2E5 919 aa17.17■□□□□ 0.34
USB1-210ENST00000565151 A0A0U1RQG5 324 aaPredicted RBP17.17■□□□□ 0.34
USB1-210ENST00000565151 RBAK-RBAKDNI3L0D1 243 aa17.17■□□□□ 0.34
USB1-210ENST00000565151 RAG1P15918 1043 aa17.17■□□□□ 0.34
USB1-210ENST00000565151 TROAPQ12815 778 aa17.17■□□□□ 0.34
USB1-210ENST00000565151 GRM4Q14833 912 aa17.17■□□□□ 0.34
USB1-210ENST00000565151 PWP2Q15269 919 aaKnown RBP17.17■□□□□ 0.34
USB1-210ENST00000565151 AP5M1Q9H0R1 490 aa17.17■□□□□ 0.34
USB1-210ENST00000565151 ABCB11O95342 1321 aa17.17■□□□□ 0.34
USB1-210ENST00000565151 UMODL1Q5DID0 1318 aa17.17■□□□□ 0.34
USB1-210ENST00000565151 TET1Q8NFU7 2136 aa17.17■□□□□ 0.34
USB1-210ENST00000565151 DCDC2CA8MYV0 355 aa17.16■□□□□ 0.34
USB1-210ENST00000565151 TIMP1P01033 207 aa17.16■□□□□ 0.34
USB1-210ENST00000565151 ITGA7Q13683 1181 aa17.16■□□□□ 0.34
USB1-210ENST00000565151 FBXO11Q86XK2 927 aa17.16■□□□□ 0.34
USB1-210ENST00000565151 DNERQ8NFT8 737 aa17.16■□□□□ 0.34
USB1-210ENST00000565151 VTI1AQ96AJ9 217 aa17.16■□□□□ 0.34
USB1-210ENST00000565151 VWCEQ96DN2 955 aa17.16■□□□□ 0.34
USB1-210ENST00000565151 TRPV6Q9H1D0 765 aa17.16■□□□□ 0.34
USB1-210ENST00000565151 PNMA2Q9UL42 364 aa17.16■□□□□ 0.34
USB1-210ENST00000565151 CHD9Q3L8U1 2897 aa17.15■□□□□ 0.34
USB1-210ENST00000565151 IFIT3O14879 490 aaKnown RBP17.15■□□□□ 0.34
USB1-210ENST00000565151 GHRHRQ02643 423 aa17.15■□□□□ 0.34
USB1-210ENST00000565151 PDE4DQ08499 809 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms