RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 CCDC194A0A1B0GVG4 234 aa22.77■■□□□ 1.24
MAP1LC3B-206ENST00000564844 KLRC4O43908 158 aa22.77■■□□□ 1.24
MAP1LC3B-206ENST00000564844 MAP2K2P36507 400 aa22.77■■□□□ 1.24
MAP1LC3B-206ENST00000564844 PAFAH1B1P43034 410 aa22.77■■□□□ 1.24
MAP1LC3B-206ENST00000564844 KCNQ4P56696 695 aa22.77■■□□□ 1.24
MAP1LC3B-206ENST00000564844 KLHL7Q8IXQ5 586 aa22.77■■□□□ 1.24
MAP1LC3B-206ENST00000564844 GOLPH3Q9H4A6 298 aa22.77■■□□□ 1.24
MAP1LC3B-206ENST00000564844 C1orf167Q5SNV9 1468 aa22.77■■□□□ 1.24
MAP1LC3B-206ENST00000564844 CPP00450 1065 aa22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 GNAT2P19087 354 aa22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 MEA1Q16626 185 aa22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 DZIP3Q86Y13 1208 aaKnown RBP22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 TRIM58Q8NG06 486 aa22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 MTMR8Q96EF0 704 aa22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 LAMB4A4D0S4 1761 aa22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 A0A1W2PQC6 194 aa22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 PLCG1P19174 1290 aa22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 KRT12Q99456 494 aa22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 TTYH3Q9C0H2 523 aa22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 PKD1L3Q7Z443 1732 aa22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 GOLGA8KD6RF30 607 aa22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 HEXIM1O94992 359 aaKnown RBP22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 GOLGA8HP0CJ92 632 aa22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 HEATR3Q7Z4Q2 680 aa22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 SH3GL2Q99962 352 aa22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 YY1AP1Q9H869 796 aa22.76■■□□□ 1.23
MAP1LC3B-206ENST00000564844 LRRC53A6NM62 1247 aa22.75■■□□□ 1.23
MAP1LC3B-206ENST00000564844 HDLBPQ00341 1268 aaKnown RBP22.75■■□□□ 1.23
MAP1LC3B-206ENST00000564844 LRRC41Q15345 812 aa22.75■■□□□ 1.23
MAP1LC3B-206ENST00000564844 CCDC91Q7Z6B0 441 aa22.75■■□□□ 1.23
MAP1LC3B-206ENST00000564844 BLIDQ8IZY5 108 aa22.75■■□□□ 1.23
MAP1LC3B-206ENST00000564844 ACSBG1Q96GR2 724 aa22.75■■□□□ 1.23
MAP1LC3B-206ENST00000564844 ZNF233A6NK53 670 aa22.75■■□□□ 1.23
MAP1LC3B-206ENST00000564844 TSPY2A6NKD2 308 aa22.75■■□□□ 1.23
MAP1LC3B-206ENST00000564844 E7EVH7 732 aa22.75■■□□□ 1.23
MAP1LC3B-206ENST00000564844 SLC1A4P43007 532 aa22.75■■□□□ 1.23
MAP1LC3B-206ENST00000564844 P2RX5Q93086 422 aa22.75■■□□□ 1.23
MAP1LC3B-206ENST00000564844 SH2D4AQ9H788 454 aa22.75■■□□□ 1.23
MAP1LC3B-206ENST00000564844 EPHB4P54760 987 aa22.74■■□□□ 1.23
MAP1LC3B-206ENST00000564844 HLTFQ14527 1009 aaKnown RBP eCLIP22.74■■□□□ 1.23
MAP1LC3B-206ENST00000564844 MIIPQ5JXC2 388 aa22.74■■□□□ 1.23
MAP1LC3B-206ENST00000564844 SUGP1Q8IWZ8 645 aaKnown RBP22.74■■□□□ 1.23
MAP1LC3B-206ENST00000564844 FAM212AQ96EL1 285 aa22.74■■□□□ 1.23
MAP1LC3B-206ENST00000564844 THAP9Q9H5L6 903 aa22.74■■□□□ 1.23
MAP1LC3B-206ENST00000564844 DDX60Q8IY21 1712 aaKnown RBP22.74■■□□□ 1.23
MAP1LC3B-206ENST00000564844 LSP1P33241 339 aa22.74■■□□□ 1.23
MAP1LC3B-206ENST00000564844 LETM2Q2VYF4 491 aa22.74■■□□□ 1.23
MAP1LC3B-206ENST00000564844 CXorf56Q9H5V9 222 aa22.74■■□□□ 1.23
MAP1LC3B-206ENST00000564844 CHRM1P11229 460 aaPredicted RBP22.73■■□□□ 1.23
MAP1LC3B-206ENST00000564844 ADAMTS7Q9UKP4 1686 aa22.73■■□□□ 1.23
MAP1LC3B-206ENST00000564844 ANO9A1A5B4 782 aa22.73■■□□□ 1.23
MAP1LC3B-206ENST00000564844 TECP42680 631 aa22.73■■□□□ 1.23
MAP1LC3B-206ENST00000564844 SUSD4Q5VX71 490 aa22.73■■□□□ 1.23
MAP1LC3B-206ENST00000564844 MMGT1Q8N4V1 131 aa22.73■■□□□ 1.23
MAP1LC3B-206ENST00000564844 C4orf32Q8N8J7 132 aa22.73■■□□□ 1.23
MAP1LC3B-206ENST00000564844 TXNRD1Q16881 649 aa22.73■■□□□ 1.23
MAP1LC3B-206ENST00000564844 CACNA2D4Q7Z3S7 1137 aa22.73■■□□□ 1.23
MAP1LC3B-206ENST00000564844 GIMAP8Q8ND71 665 aaPredicted RBP22.73■■□□□ 1.23
MAP1LC3B-206ENST00000564844 GLIS3Q8NEA6 775 aa22.73■■□□□ 1.23
MAP1LC3B-206ENST00000564844 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.73■■□□□ 1.23
MAP1LC3B-206ENST00000564844 VAT1LQ9HCJ6 419 aa22.73■■□□□ 1.23
MAP1LC3B-206ENST00000564844 HYOU1Q9Y4L1 999 aa22.73■■□□□ 1.23
MAP1LC3B-206ENST00000564844 CEP85LQ5SZL2 805 aa22.72■■□□□ 1.23
MAP1LC3B-206ENST00000564844 NAA35Q5VZE5 725 aa22.72■■□□□ 1.23
MAP1LC3B-206ENST00000564844 DDX42Q86XP3 938 aaKnown RBP eCLIP22.72■■□□□ 1.232e-6■■■■■ 29.9
MAP1LC3B-206ENST00000564844 CCDC170Q8IYT3 715 aa22.72■■□□□ 1.23
MAP1LC3B-206ENST00000564844 SLC4A9Q96Q91 983 aa22.72■■□□□ 1.23
MAP1LC3B-206ENST00000564844 TLR10Q9BXR5 811 aa22.72■■□□□ 1.23
MAP1LC3B-206ENST00000564844 MROH5Q6ZUA9 1318 aa22.72■■□□□ 1.23
MAP1LC3B-206ENST00000564844 LONP1P36776 959 aaKnown RBP22.72■■□□□ 1.23
MAP1LC3B-206ENST00000564844 EHHADHQ08426 723 aa22.72■■□□□ 1.23
MAP1LC3B-206ENST00000564844 CEP57Q86XR8 500 aa22.72■■□□□ 1.23
MAP1LC3B-206ENST00000564844 ALS2CR12Q96Q35 445 aa22.72■■□□□ 1.23
MAP1LC3B-206ENST00000564844 CHRNDQ07001 517 aa22.71■■□□□ 1.23
MAP1LC3B-206ENST00000564844 RBM28Q9NW13 759 aaKnown RBP22.71■■□□□ 1.23
MAP1LC3B-206ENST00000564844 PNPLA7Q6ZV29 1317 aa22.71■■□□□ 1.23
MAP1LC3B-206ENST00000564844 TMOD1P28289 359 aa22.71■■□□□ 1.23
MAP1LC3B-206ENST00000564844 SF3B2Q13435 895 aaKnown RBP22.71■■□□□ 1.23
MAP1LC3B-206ENST00000564844 FNBP4Q8N3X1 1017 aaPredicted RBP22.71■■□□□ 1.23
MAP1LC3B-206ENST00000564844 MEFVO15553 781 aaPredicted RBP22.7■■□□□ 1.22
MAP1LC3B-206ENST00000564844 NR1D1P20393 614 aa22.7■■□□□ 1.22
MAP1LC3B-206ENST00000564844 CABP7Q86V35 215 aa22.7■■□□□ 1.22
MAP1LC3B-206ENST00000564844 SEMA6BQ9H3T3 888 aa22.7■■□□□ 1.22
MAP1LC3B-206ENST00000564844 TNS3Q68CZ2 1445 aa22.7■■□□□ 1.22
MAP1LC3B-206ENST00000564844 CCNE1P24864 410 aa22.7■■□□□ 1.22
MAP1LC3B-206ENST00000564844 PFKFB3Q16875 520 aaPredicted RBP22.7■■□□□ 1.22
MAP1LC3B-206ENST00000564844 POTEDQ86YR6 584 aa22.7■■□□□ 1.22
MAP1LC3B-206ENST00000564844 KIRREL3Q8IZU9 778 aa22.7■■□□□ 1.22
MAP1LC3B-206ENST00000564844 TBC1D7Q9P0N9 293 aa22.7■■□□□ 1.22
MAP1LC3B-206ENST00000564844 CCNT1O60563 726 aaKnown RBP22.69■■□□□ 1.22
MAP1LC3B-206ENST00000564844 ZNF473Q8WTR7 871 aaKnown RBP22.69■■□□□ 1.22
MAP1LC3B-206ENST00000564844 CABS1Q96KC9 395 aa22.69■■□□□ 1.22
MAP1LC3B-206ENST00000564844 PURBQ96QR8 312 aaKnown RBP22.69■■□□□ 1.22
MAP1LC3B-206ENST00000564844 CCT8L2Q96SF2 557 aa22.69■■□□□ 1.22
MAP1LC3B-206ENST00000564844 FRMD3A2A2Y4 597 aa22.69■■□□□ 1.22
MAP1LC3B-206ENST00000564844 RHOBTB3O94955 611 aa22.69■■□□□ 1.22
MAP1LC3B-206ENST00000564844 IGHMBP2P38935 993 aaKnown RBP22.69■■□□□ 1.22
MAP1LC3B-206ENST00000564844 SETQ01105 290 aaPredicted RBP22.69■■□□□ 1.22
MAP1LC3B-206ENST00000564844 CEP89Q96ST8 783 aa22.69■■□□□ 1.22
MAP1LC3B-206ENST00000564844 NUP58Q9BVL2 599 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms