RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 MACROD2A1Z1Q3 448 aa17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 EIF3CLB5ME19 914 aaKnown RBP17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 ZNF662Q6ZS27 426 aa17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 KRT25Q7Z3Z0 450 aa17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 RETREG2Q8NC44 543 aa17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 KIAA0895Q8NCT3 520 aa17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 CCDC47Q96A33 483 aaKnown RBP17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 EIF3CQ99613 913 aaKnown RBP17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 SEMA6BQ9H3T3 888 aa17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 MAGEF1Q9HAY2 307 aa17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 SLC39A2Q9NP94 309 aa17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 CNTNAP4Q9C0A0 1308 aa17.27■□□□□ 0.36
GTF3C1-205ENST00000564747 ZMYND10O75800 440 aa17.27■□□□□ 0.36
GTF3C1-205ENST00000564747 PLEKP08567 350 aaPredicted RBP17.27■□□□□ 0.36
GTF3C1-205ENST00000564747 KRT26Q7Z3Y9 468 aa17.27■□□□□ 0.36
GTF3C1-205ENST00000564747 NEK8Q86SG6 692 aa17.27■□□□□ 0.36
GTF3C1-205ENST00000564747 AMIGO3Q86WK7 504 aa17.27■□□□□ 0.36
GTF3C1-205ENST00000564747 CCDC170Q8IYT3 715 aa17.27■□□□□ 0.36
GTF3C1-205ENST00000564747 TBCKQ8TEA7 893 aa17.27■□□□□ 0.36
GTF3C1-205ENST00000564747 SPZ1Q9BXG8 430 aa17.27■□□□□ 0.36
GTF3C1-205ENST00000564747 BIN2Q9UBW5 565 aaPredicted RBP17.27■□□□□ 0.36
GTF3C1-205ENST00000564747 ZNF263O14978 683 aa17.27■□□□□ 0.35
GTF3C1-205ENST00000564747 IPO7O95373 1038 aaKnown RBP17.27■□□□□ 0.35
GTF3C1-205ENST00000564747 PPP4CP60510 307 aa17.27■□□□□ 0.35
GTF3C1-205ENST00000564747 NFIXQ14938 502 aa17.27■□□□□ 0.35
GTF3C1-205ENST00000564747 GOLGA5Q8TBA6 731 aa17.27■□□□□ 0.35
GTF3C1-205ENST00000564747 EYA3Q99504 573 aa17.27■□□□□ 0.35
GTF3C1-205ENST00000564747 LZTS2Q9BRK4 669 aa17.27■□□□□ 0.35
GTF3C1-205ENST00000564747 C6orf50Q9HD87 102 aa17.27■□□□□ 0.35
GTF3C1-205ENST00000564747 MAST2Q6P0Q8 1798 aa17.26■□□□□ 0.35
GTF3C1-205ENST00000564747 PDE2AO00408 941 aaPredicted RBP17.26■□□□□ 0.35
GTF3C1-205ENST00000564747 GNPATO15228 680 aa17.26■□□□□ 0.35
GTF3C1-205ENST00000564747 CDK8P49336 464 aa17.26■□□□□ 0.35
GTF3C1-205ENST00000564747 HSP90B2PQ58FF3 399 aa17.26■□□□□ 0.35
GTF3C1-205ENST00000564747 BARGINQ6ZT62 677 aa17.26■□□□□ 0.35
GTF3C1-205ENST00000564747 POTEDQ86YR6 584 aa17.26■□□□□ 0.35
GTF3C1-205ENST00000564747 FAM114A1Q8IWE2 563 aa17.26■□□□□ 0.35
GTF3C1-205ENST00000564747 TXKP42681 527 aa17.26■□□□□ 0.35
GTF3C1-205ENST00000564747 ZSCAN29Q8IWY8 852 aaPredicted RBP17.26■□□□□ 0.35
GTF3C1-205ENST00000564747 EHBP1Q8NDI1 1231 aa17.26■□□□□ 0.35
GTF3C1-205ENST00000564747 GDAP1L1Q96MZ0 367 aa17.26■□□□□ 0.35
GTF3C1-205ENST00000564747 ERGIC2Q96RQ1 377 aa17.26■□□□□ 0.35
GTF3C1-205ENST00000564747 PIGSQ96S52 555 aa17.26■□□□□ 0.35
GTF3C1-205ENST00000564747 UBA5Q9GZZ9 404 aa17.26■□□□□ 0.35
GTF3C1-205ENST00000564747 TMEM260Q9NX78 707 aa17.26■□□□□ 0.35
GTF3C1-205ENST00000564747 MYH1P12882 1939 aa17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 RPS6KA4O75676 772 aa17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 GNA11P29992 359 aa17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 ACTN2P35609 894 aa17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 NT5C2P49902 561 aa17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 GSTO1P78417 241 aa17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 FAM98CQ17RN3 349 aaKnown RBP17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 SMCR8Q8TEV9 937 aaPredicted RBP17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 JADE2Q9NQC1 790 aa17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 LRWD1Q9UFC0 647 aa17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 EPHB6O15197 1021 aa17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 IDEP14735 1019 aa17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 AMPD3Q01432 767 aa17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 GPIHBP1Q8IV16 184 aa17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 FAM71BQ8TC56 605 aa17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 RRP36Q96EU6 259 aaKnown RBP17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 CCDC42Q96M95 316 aa17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 TRIM34Q9BYJ4 488 aa17.25■□□□□ 0.35
GTF3C1-205ENST00000564747 TNNT3P45378 269 aaPredicted RBP17.24■□□□□ 0.35
GTF3C1-205ENST00000564747 KIF5AQ12840 1032 aa17.24■□□□□ 0.35
GTF3C1-205ENST00000564747 SOGA3Q5TF21 947 aa17.24■□□□□ 0.35
GTF3C1-205ENST00000564747 CNNM4Q6P4Q7 775 aa17.24■□□□□ 0.35
GTF3C1-205ENST00000564747 CAGE1Q8TC20 777 aa17.24■□□□□ 0.35
GTF3C1-205ENST00000564747 PURBQ96QR8 312 aaKnown RBP17.24■□□□□ 0.35
GTF3C1-205ENST00000564747 HINFPQ9BQA5 517 aa17.24■□□□□ 0.35
GTF3C1-205ENST00000564747 RTFDC1Q9BY42 306 aaPredicted RBP17.24■□□□□ 0.35
GTF3C1-205ENST00000564747 ERCC3P19447 782 aa17.24■□□□□ 0.35
GTF3C1-205ENST00000564747 FKBP15Q5T1M5 1219 aa17.24■□□□□ 0.35
GTF3C1-205ENST00000564747 CENPPQ6IPU0 288 aa17.24■□□□□ 0.35
GTF3C1-205ENST00000564747 DYMQ7RTS9 669 aa17.24■□□□□ 0.35
GTF3C1-205ENST00000564747 CALML4Q96GE6 196 aa17.24■□□□□ 0.35
GTF3C1-205ENST00000564747 FAM207AQ9NSI2 230 aaPredicted RBP17.24■□□□□ 0.35
GTF3C1-205ENST00000564747 BLOC1S4Q9NUP1 217 aa17.24■□□□□ 0.35
GTF3C1-205ENST00000564747 NRAPQ86VF7 1730 aa17.24■□□□□ 0.35
GTF3C1-205ENST00000564747 MYMKA6NI61 221 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 BTDP43251 543 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 VAV2P52735 878 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 GRB10Q13322 594 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 FIGNQ5HY92 759 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 SV2BQ7L1I2 683 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 GSPT2Q8IYD1 628 aaKnown RBP17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 SECISBP2LQ93073 1101 aaKnown RBP17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 CEP95Q96GE4 821 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 SEC63Q9UGP8 760 aaKnown RBP17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 A0A1W2PQJ5 194 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 RGL2O15211 777 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 MYBL2P10244 700 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 CKAP4Q07065 602 aaKnown RBP17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 CCDC96Q2M329 555 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 C16orf86Q6ZW13 317 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 C2CD5Q86YS7 1000 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 REXO1Q8N1G1 1221 aaKnown RBP17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 NEDD1Q8NHV4 660 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 ARHGEF1Q92888 912 aaKnown RBP17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 ARHGAP20Q9P2F6 1191 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms