RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 MAGEC2Q9UBF1 373 aaPredicted RBP17.08■□□□□ 0.32
HERC2-207ENST00000564734 B4DLN1 442 aa17.07■□□□□ 0.32
HERC2-207ENST00000564734 TFRCP02786 760 aaKnown RBP17.07■□□□□ 0.32
HERC2-207ENST00000564734 TECP42680 631 aa17.07■□□□□ 0.32
HERC2-207ENST00000564734 PDE4DQ08499 809 aa17.07■□□□□ 0.32
HERC2-207ENST00000564734 BICDL2A1A5D9 508 aa17.07■□□□□ 0.32
HERC2-207ENST00000564734 MAP2K7O14733 419 aa17.07■□□□□ 0.32
HERC2-207ENST00000564734 MIIPQ5JXC2 388 aa17.07■□□□□ 0.32
HERC2-207ENST00000564734 ZSCAN29Q8IWY8 852 aaPredicted RBP17.07■□□□□ 0.32
HERC2-207ENST00000564734 EXOC1Q9NV70 894 aa17.07■□□□□ 0.32
HERC2-207ENST00000564734 TRIM10Q9UDY6 481 aa17.07■□□□□ 0.32
HERC2-207ENST00000564734 POLLQ9UGP5 575 aa17.07■□□□□ 0.32
HERC2-207ENST00000564734 SEC63Q9UGP8 760 aaKnown RBP17.07■□□□□ 0.32
HERC2-207ENST00000564734 FCER1AP12319 257 aa17.07■□□□□ 0.32
HERC2-207ENST00000564734 PPP1R2P41236 205 aa17.07■□□□□ 0.32
HERC2-207ENST00000564734 LONRF2Q1L5Z9 754 aa17.07■□□□□ 0.32
HERC2-207ENST00000564734 SOGA3Q5TF21 947 aa17.07■□□□□ 0.32
HERC2-207ENST00000564734 MSL1Q68DK7 614 aa17.07■□□□□ 0.32
HERC2-207ENST00000564734 PNKPQ96T60 521 aa17.07■□□□□ 0.32
HERC2-207ENST00000564734 TMEM260Q9NX78 707 aa17.07■□□□□ 0.32
HERC2-207ENST00000564734 BIN2Q9UBW5 565 aaPredicted RBP17.07■□□□□ 0.32
HERC2-207ENST00000564734 POTEB2H3BUK9 544 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 hCG_1984214I3L0E3 225 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 PSMD14O00487 310 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 PDHBP11177 359 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 ADRA2BP18089 450 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 GRB10Q13322 594 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 MFSD14BQ5SR56 506 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 POTEDQ86YR6 584 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 ZNF713Q8N859 430 aaPredicted RBP17.06■□□□□ 0.32
HERC2-207ENST00000564734 RETREG2Q8NC44 543 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 KIAA0895Q8NCT3 520 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 UBA5Q9GZZ9 404 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 HAUS4Q9H6D7 363 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 VAT1LQ9HCJ6 419 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 ASIC1P78348 528 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 GABPAQ06546 454 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 NUP58Q9BVL2 599 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 BLOC1S4Q9NUP1 217 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 AGPAT5Q9NUQ2 364 aa17.06■□□□□ 0.32
HERC2-207ENST00000564734 IGKV6D-41A0A0C4DH26 115 aa17.05■□□□□ 0.32
HERC2-207ENST00000564734 SNHG28P0DPA3 235 aa17.05■□□□□ 0.32
HERC2-207ENST00000564734 SLC27A3Q5K4L6 730 aa17.05■□□□□ 0.32
HERC2-207ENST00000564734 BEND6Q5SZJ8 279 aaPredicted RBP17.05■□□□□ 0.32
HERC2-207ENST00000564734 SLF2Q8IX21 1173 aa17.05■□□□□ 0.32
HERC2-207ENST00000564734 REXO1Q8N1G1 1221 aaKnown RBP17.05■□□□□ 0.32
HERC2-207ENST00000564734 TBC1D16Q8TBP0 767 aa17.05■□□□□ 0.32
HERC2-207ENST00000564734 CCDC47Q96A33 483 aaKnown RBP17.05■□□□□ 0.32
HERC2-207ENST00000564734 RBM17Q96I25 401 aaKnown RBP17.05■□□□□ 0.32
HERC2-207ENST00000564734 CNOT6LQ96LI5 555 aaKnown RBP17.05■□□□□ 0.32
HERC2-207ENST00000564734 PNMA5Q96PV4 448 aa17.05■□□□□ 0.32
HERC2-207ENST00000564734 SEMA6BQ9H3T3 888 aa17.05■□□□□ 0.32
HERC2-207ENST00000564734 MYO6Q9UM54 1294 aa17.05■□□□□ 0.32
HERC2-207ENST00000564734 FOCADQ5VW36 1801 aa17.05■□□□□ 0.32
HERC2-207ENST00000564734 KLK7P49862 253 aa17.05■□□□□ 0.32
HERC2-207ENST00000564734 FXR2P51116 673 aaKnown RBP eCLIP17.05■□□□□ 0.324e-7■■■■□ 26.3
HERC2-207ENST00000564734 AMPD3Q01432 767 aa17.05■□□□□ 0.32
HERC2-207ENST00000564734 TRAPPC11Q7Z392 1133 aa17.05■□□□□ 0.32
HERC2-207ENST00000564734 TBC1D22AQ8WUA7 517 aa17.05■□□□□ 0.32
HERC2-207ENST00000564734 MTMR4Q9NYA4 1195 aa17.05■□□□□ 0.32
HERC2-207ENST00000564734 BBOX1O75936 387 aa17.05■□□□□ 0.32
HERC2-207ENST00000564734 GYS1P13807 737 aa17.05■□□□□ 0.32
HERC2-207ENST00000564734 SMC1AQ14683 1233 aaKnown RBP17.05■□□□□ 0.32
HERC2-207ENST00000564734 ERGIC2Q96RQ1 377 aa17.05■□□□□ 0.32
HERC2-207ENST00000564734 GOLGB1Q14789 3259 aaKnown RBP17.04■□□□□ 0.32
HERC2-207ENST00000564734 NKRFO15226 690 aaKnown RBP eCLIP17.04■□□□□ 0.32
HERC2-207ENST00000564734 HOXA10P31260 410 aaPredicted RBP17.04■□□□□ 0.32
HERC2-207ENST00000564734 CYP2C19P33261 490 aa17.04■□□□□ 0.32
HERC2-207ENST00000564734 FIGNQ5HY92 759 aa17.04■□□□□ 0.32
HERC2-207ENST00000564734 CENPPQ6IPU0 288 aa17.04■□□□□ 0.32
HERC2-207ENST00000564734 FAM114A1Q8IWE2 563 aa17.04■□□□□ 0.32
HERC2-207ENST00000564734 DAGLAQ9Y4D2 1042 aa17.04■□□□□ 0.32
HERC2-207ENST00000564734 LTBP1Q14766 1721 aa17.04■□□□□ 0.32
HERC2-207ENST00000564734 PLSCR1O15162 318 aa17.04■□□□□ 0.32
HERC2-207ENST00000564734 SERPINB2P05120 415 aa17.04■□□□□ 0.32
HERC2-207ENST00000564734 ZBED6P86452 979 aa17.04■□□□□ 0.32
HERC2-207ENST00000564734 TBC1D8BQ0IIM8 1120 aa17.04■□□□□ 0.32
HERC2-207ENST00000564734 CNNM4Q6P4Q7 775 aa17.04■□□□□ 0.32
HERC2-207ENST00000564734 GUCA1BQ9UMX6 200 aa17.04■□□□□ 0.32
HERC2-207ENST00000564734 A0A1W2PQJ5 194 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 CTAGE15A4D2H0 777 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 CTAGE8P0CG41 777 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 ILDR2Q71H61 639 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 CTAGE6Q86UF2 777 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 CTAGE4Q8IX94 777 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 CALML4Q96GE6 196 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 FRMPD2Q68DX3 1309 aaPredicted RBP17.03■□□□□ 0.32
HERC2-207ENST00000564734 MYMKA6NI61 221 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 PES1O00541 588 aaKnown RBP17.03■□□□□ 0.32
HERC2-207ENST00000564734 OAS2P29728 719 aaKnown RBP17.03■□□□□ 0.32
HERC2-207ENST00000564734 TXKP42681 527 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 CDK17Q00537 523 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 HPS3Q969F9 1004 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.03■□□□□ 0.32
HERC2-207ENST00000564734 STK17AQ9UEE5 414 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 PVALEFA0A1B0GWK0 134 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 SLC37A4O43826 429 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 KRT83P78385 493 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 ASPRV1Q53RT3 343 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 SV2BQ7L1I2 683 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms