RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 MYRIPQ8NFW9 859 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 MASTLQ96GX5 879 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 EPAS1Q99814 870 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 HSD3B7Q9H2F3 369 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 G3BP2Q9UN86 482 aaKnown RBP8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 DAGLAQ9Y4D2 1042 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 PARP3Q9Y6F1 533 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 FOCADQ5VW36 1801 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 DDX60LQ5H9U9 1706 aaKnown RBP8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 KLRF2D3W0D1 207 aa8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 PARP1P09874 1014 aaKnown RBP8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 BMP6P22004 513 aa8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 GNA11P29992 359 aa8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 UBASH3AP57075 661 aa8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 FKBP1AP62942 108 aaKnown RBP8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 GABPAQ06546 454 aa8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 PPP4R3BQ5MIZ7 849 aa8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 ISM2Q6H9L7 571 aa8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 CAPN12Q6ZSI9 719 aa8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 PODNQ7Z5L7 613 aa8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 SLC51AQ86UW1 340 aa8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 COL23A1Q86Y22 540 aaPredicted RBP8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 SLC43A3Q8NBI5 491 aa8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 SLC44A5Q8NCS7 719 aa8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 SYMPKQ92797 1274 aaKnown RBP8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 EPSTI1Q96J88 318 aa8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 ZMYND12Q9H0C1 365 aa8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 SEPT3Q9UH03 358 aa8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 SWAP70Q9UH65 585 aa8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 SAP30BPQ9UHR5 308 aaKnown RBP8.21□□□□□ -1.09
HERPUD1-209ENST00000564678 ANKRD31Q8N7Z5 1873 aa8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 UQCRHLA0A096LP55 91 aa8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 FOXN1O15353 648 aa8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 CYTH3O43739 400 aa8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 SERPINC1P01008 464 aa8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 UQCRHP07919 91 aa8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 FBXO45P0C2W1 286 aa8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 SKILP12757 684 aa8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 VEGFAP15692 232 aaPredicted RBP8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 ORC2Q13416 577 aaPredicted RBP8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 SLC4A8Q2Y0W8 1093 aa8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 DPP8Q6V1X1 898 aaPredicted RBP8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 USP49Q70CQ1 688 aa8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 C17orf53Q8N3J3 647 aaPredicted RBP8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 PDILTQ8N807 584 aa8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 C4orf32Q8N8J7 132 aa8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 PAGE5Q96GU1 130 aa8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 TMEM121BQ9BXQ6 578 aaPredicted RBP8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 TGIF2Q9GZN2 237 aa8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 PCDH10Q9P2E7 1040 aa8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 EGFL7Q9UHF1 273 aa8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 COL4A3BPQ9Y5P4 624 aa8.21□□□□□ -1.1
HERPUD1-209ENST00000564678 SNED1Q8TER0 1413 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 VWA3AA6NCI4 1184 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 STXBP3O00186 592 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 APBA3O96018 575 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 TUBB4AP04350 444 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 FDX1P10109 184 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 TXLNAP40222 546 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 PRPHP41219 470 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 CCZ1BP86790 482 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 CCZ1P86791 482 aaPredicted RBP8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 OCLNQ16625 522 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 DHX58Q96C10 678 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 RRP36Q96EU6 259 aaKnown RBP8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 RIOX1Q9H6W3 641 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 FANCLQ9NW38 375 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 PCDHA6Q9UN73 950 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 PCDHA8Q9Y5H6 950 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 DNMT3AQ9Y6K1 912 aaPredicted RBP8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 C10orf71Q711Q0 1435 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 QSER1Q2KHR3 1735 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 ESYT2A0FGR8 921 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 KIF2AO00139 706 aaPredicted RBP8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 WNT7AO00755 349 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 RIMBP2O15034 1052 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 C21orf2O43822 256 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 MYL1P05976 194 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 ZNF18P17022 549 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 SFPQP23246 707 aaKnown RBP eCLIP8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 MCM7P33993 719 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 ZNF827Q17R98 1081 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 WWC2Q6AWC2 1192 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 KRT25Q7Z3Z0 450 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 TMC6Q7Z403 805 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 ZSCAN29Q8IWY8 852 aaPredicted RBP8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 RGL4Q8IZJ4 473 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 CCDC112Q8NEF3 446 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 C1orf216Q8TAB5 229 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 CEP95Q96GE4 821 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 C6orf50Q9HD87 102 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 MTMR4Q9NYA4 1195 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 SEC63Q9UGP8 760 aaKnown RBP8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 TTF2Q9UNY4 1162 aaKnown RBP8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 PAXBP1Q9Y5B6 917 aa8.2□□□□□ -1.1
HERPUD1-209ENST00000564678 A0A087X0B3 334 aa8.19□□□□□ -1.1
HERPUD1-209ENST00000564678 IGKV6D-41A0A0C4DH26 115 aa8.19□□□□□ -1.1
HERPUD1-209ENST00000564678 PSDA5PKW4 1024 aaPredicted RBP8.19□□□□□ -1.1
HERPUD1-209ENST00000564678 G3V3G9 751 aa8.19□□□□□ -1.1
HERPUD1-209ENST00000564678 HOXA2O43364 376 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms