RNA–Protein interactions for RNA: ENST00000564662.1

COTL1-204, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 2

Gene COTL1, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-204ENST00000564662 TIFAQ96CG3 184 aa23.59■■□□□ 1.37
COTL1-204ENST00000564662 GRIN2DO15399 1336 aa23.59■■□□□ 1.37
COTL1-204ENST00000564662 TANC1Q9C0D5 1861 aa23.58■■□□□ 1.37
COTL1-204ENST00000564662 GRXCR1A8MXD5 290 aa23.58■■□□□ 1.37
COTL1-204ENST00000564662 B4GALT4O60513 344 aa23.58■■□□□ 1.37
COTL1-204ENST00000564662 CALML3P27482 149 aa23.58■■□□□ 1.37
COTL1-204ENST00000564662 MFAP1P55081 439 aaKnown RBP23.58■■□□□ 1.37
COTL1-204ENST00000564662 GRIN2CQ14957 1233 aa23.58■■□□□ 1.37
COTL1-204ENST00000564662 ZKSCAN3Q9BRR0 538 aa23.58■■□□□ 1.37
COTL1-204ENST00000564662 Q9Y3F1 56 aa23.58■■□□□ 1.37
COTL1-204ENST00000564662 PCP11498 1178 aaKnown RBP23.57■■□□□ 1.36
COTL1-204ENST00000564662 PBX2P40425 430 aa23.57■■□□□ 1.36
COTL1-204ENST00000564662 DUSP28Q4G0W2 176 aa23.57■■□□□ 1.36
COTL1-204ENST00000564662 SMC5Q8IY18 1101 aa23.57■■□□□ 1.36
COTL1-204ENST00000564662 CLEC4DQ8WXI8 215 aa23.57■■□□□ 1.36
COTL1-204ENST00000564662 TRPV6Q9H1D0 765 aa23.57■■□□□ 1.36
COTL1-204ENST00000564662 RNF41Q9H4P4 317 aaPredicted RBP23.57■■□□□ 1.36
COTL1-204ENST00000564662 ZNF576Q9H609 170 aa23.57■■□□□ 1.36
COTL1-204ENST00000564662 IL23AQ9NPF7 189 aa23.57■■□□□ 1.36
COTL1-204ENST00000564662 SCN5AQ14524 2016 aa23.57■■□□□ 1.36
COTL1-204ENST00000564662 SDSP20132 328 aa23.56■■□□□ 1.36
COTL1-204ENST00000564662 CCL23P55773 120 aa23.56■■□□□ 1.36
COTL1-204ENST00000564662 RASIP1Q5U651 963 aa23.56■■□□□ 1.36
COTL1-204ENST00000564662 RNF207Q6ZRF8 634 aa23.56■■□□□ 1.36
COTL1-204ENST00000564662 ESR2Q92731 530 aa23.56■■□□□ 1.36
COTL1-204ENST00000564662 YTHDC1Q96MU7 727 aaKnown RBP23.56■■□□□ 1.36
COTL1-204ENST00000564662 TTC14Q96N46 770 aa23.56■■□□□ 1.36
COTL1-204ENST00000564662 PBX4Q9BYU1 374 aa23.56■■□□□ 1.36
COTL1-204ENST00000564662 WDR11Q9BZH6 1224 aa23.56■■□□□ 1.36
COTL1-204ENST00000564662 WDR19Q8NEZ3 1342 aa23.56■■□□□ 1.36
COTL1-204ENST00000564662 CUL9Q8IWT3 2517 aa23.56■■□□□ 1.36
COTL1-204ENST00000564662 KIAA1217Q5T5P2 1943 aa23.55■■□□□ 1.36
COTL1-204ENST00000564662 SCN10AQ9Y5Y9 1956 aa23.55■■□□□ 1.36
COTL1-204ENST00000564662 GOLGA8HP0CJ92 632 aa23.55■■□□□ 1.36
COTL1-204ENST00000564662 SNHG28P0DPA3 235 aa23.55■■□□□ 1.36
COTL1-204ENST00000564662 PDE4DQ08499 809 aa23.55■■□□□ 1.36
COTL1-204ENST00000564662 USH1GQ495M9 461 aa23.55■■□□□ 1.36
COTL1-204ENST00000564662 OR6J1Q8NGC5 347 aa23.55■■□□□ 1.36
COTL1-204ENST00000564662 NOC4LQ9BVI4 516 aaKnown RBP23.55■■□□□ 1.36
COTL1-204ENST00000564662 LOC102724159A0A0B4J2E5 919 aa23.54■■□□□ 1.36
COTL1-204ENST00000564662 RPS6P62753 249 aaKnown RBP23.54■■□□□ 1.36
COTL1-204ENST00000564662 PWP2Q15269 919 aaKnown RBP23.54■■□□□ 1.36
COTL1-204ENST00000564662 CHD1LQ86WJ1 897 aa23.54■■□□□ 1.36
COTL1-204ENST00000564662 PLEKHM2Q8IWE5 1019 aa23.54■■□□□ 1.36
COTL1-204ENST00000564662 WNT8AQ9H1J5 351 aa23.54■■□□□ 1.36
COTL1-204ENST00000564662 CPVLQ9H3G5 476 aa23.54■■□□□ 1.36
COTL1-204ENST00000564662 RWDD1Q9H446 243 aaPredicted RBP23.54■■□□□ 1.36
COTL1-204ENST00000564662 DIAPH3Q9NSV4 1193 aa23.54■■□□□ 1.36
COTL1-204ENST00000564662 POLR3EQ9NVU0 708 aa23.54■■□□□ 1.36
COTL1-204ENST00000564662 PNMA2Q9UL42 364 aa23.54■■□□□ 1.36
COTL1-204ENST00000564662 ZNF213O14771 459 aa23.53■■□□□ 1.36
COTL1-204ENST00000564662 MYL3P08590 195 aa23.53■■□□□ 1.36
COTL1-204ENST00000564662 AAMPQ13685 434 aa23.53■■□□□ 1.36
COTL1-204ENST00000564662 PPP2R5BQ15173 497 aa23.53■■□□□ 1.36
COTL1-204ENST00000564662 GPATCH4Q5T3I0 446 aaKnown RBP23.53■■□□□ 1.36
COTL1-204ENST00000564662 CWC27Q6UX04 472 aaKnown RBP23.53■■□□□ 1.36
COTL1-204ENST00000564662 HERVK_113Q902F9 699 aa23.53■■□□□ 1.36
COTL1-204ENST00000564662 MPHOSPH6Q99547 160 aaKnown RBP23.53■■□□□ 1.36
COTL1-204ENST00000564662 SEZ6LQ9BYH1 1024 aa23.53■■□□□ 1.36
COTL1-204ENST00000564662 ALDH8A1Q9H2A2 487 aaPredicted RBP23.53■■□□□ 1.36
COTL1-204ENST00000564662 MTIF3Q9H2K0 278 aaKnown RBP23.53■■□□□ 1.36
COTL1-204ENST00000564662 CXXC1Q9P0U4 656 aaPredicted RBP23.53■■□□□ 1.36
COTL1-204ENST00000564662 KDM4AO75164 1064 aa23.52■■□□□ 1.36
COTL1-204ENST00000564662 CPT1AP50416 773 aa23.52■■□□□ 1.36
COTL1-204ENST00000564662 PURAQ00577 322 aaKnown RBP23.52■■□□□ 1.36
COTL1-204ENST00000564662 OTOP2Q7RTS6 562 aa23.52■■□□□ 1.36
COTL1-204ENST00000564662 PRUNE2Q8WUY3 3088 aa23.51■■□□□ 1.35
COTL1-204ENST00000564662 RBM47A0AV96 593 aaKnown RBP23.51■■□□□ 1.35
COTL1-204ENST00000564662 IGHDP01880 384 aa23.51■■□□□ 1.35
COTL1-204ENST00000564662 FGBP02675 491 aa23.51■■□□□ 1.35
COTL1-204ENST00000564662 IQCA1Q86XH1 822 aa23.51■■□□□ 1.35
COTL1-204ENST00000564662 USP38Q8NB14 1042 aa23.51■■□□□ 1.35
COTL1-204ENST00000564662 PNMA1Q8ND90 353 aa23.51■■□□□ 1.35
COTL1-204ENST00000564662 DNERQ8NFT8 737 aa23.51■■□□□ 1.35
COTL1-204ENST00000564662 SCLYQ96I15 445 aa23.51■■□□□ 1.35
COTL1-204ENST00000564662 UBA5Q9GZZ9 404 aa23.51■■□□□ 1.35
COTL1-204ENST00000564662 OSBPL3Q9H4L5 887 aa23.51■■□□□ 1.35
COTL1-204ENST00000564662 RAD50Q92878 1312 aa23.51■■□□□ 1.35
COTL1-204ENST00000564662 B4E1Z4 1266 aa23.5■■□□□ 1.35
COTL1-204ENST00000564662 EDNRBP24530 442 aa23.5■■□□□ 1.35
COTL1-204ENST00000564662 NUCB1Q02818 461 aa23.5■■□□□ 1.35
COTL1-204ENST00000564662 CDC37Q16543 378 aaPredicted RBP23.5■■□□□ 1.35
COTL1-204ENST00000564662 FAM47CQ5HY64 1035 aa23.5■■□□□ 1.35
COTL1-204ENST00000564662 DGKHQ86XP1 1220 aa23.5■■□□□ 1.35
COTL1-204ENST00000564662 PPP1R13LQ8WUF5 828 aa23.5■■□□□ 1.35
COTL1-204ENST00000564662 COPS5Q92905 334 aa23.5■■□□□ 1.35
COTL1-204ENST00000564662 GAS2L1Q99501 681 aaPredicted RBP23.5■■□□□ 1.35
COTL1-204ENST00000564662 KAT14Q9H8E8 782 aa23.5■■□□□ 1.35
COTL1-204ENST00000564662 GPHNQ9NQX3 736 aaPredicted RBP23.5■■□□□ 1.35
COTL1-204ENST00000564662 TRMT13Q9NUP7 481 aaKnown RBP23.5■■□□□ 1.35
COTL1-204ENST00000564662 TNKSO95271 1327 aa23.5■■□□□ 1.35
COTL1-204ENST00000564662 CYP2C9P11712 490 aa23.49■■□□□ 1.35
COTL1-204ENST00000564662 RAB30Q15771 203 aa23.49■■□□□ 1.35
COTL1-204ENST00000564662 SCFD2Q8WU76 684 aa23.49■■□□□ 1.35
COTL1-204ENST00000564662 MTG1Q9BT17 334 aaPredicted RBP23.49■■□□□ 1.35
COTL1-204ENST00000564662 PRDM12Q9H4Q4 367 aa23.49■■□□□ 1.35
COTL1-204ENST00000564662 MSRAQ9UJ68 235 aa23.49■■□□□ 1.35
COTL1-204ENST00000564662 NKRFO15226 690 aaKnown RBP eCLIP23.48■■□□□ 1.35
COTL1-204ENST00000564662 BRDTQ58F21 947 aaPredicted RBP23.48■■□□□ 1.35
COTL1-204ENST00000564662 NKX2-4Q9H2Z4 354 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms