RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 WDR19Q8NEZ3 1342 aa28.04■■■□□ 2.08
NME3-206ENST00000564252 PPIGQ13427 754 aaKnown RBP eCLIP28.04■■■□□ 2.081e-15■□□□□ 10.6
NME3-206ENST00000564252 C16orf59Q7L2K0 433 aa28.04■■■□□ 2.08
NME3-206ENST00000564252 PPP1R12CQ9BZL4 782 aa28.04■■■□□ 2.08
NME3-206ENST00000564252 DIAPH3Q9NSV4 1193 aa28.04■■■□□ 2.08
NME3-206ENST00000564252 PNMA2Q9UL42 364 aa28.04■■■□□ 2.08
NME3-206ENST00000564252 ZEB2O60315 1214 aa28.03■■■□□ 2.08
NME3-206ENST00000564252 ITGA7Q13683 1181 aa28.03■■■□□ 2.08
NME3-206ENST00000564252 DUSP28Q4G0W2 176 aa28.03■■■□□ 2.08
NME3-206ENST00000564252 DGKHQ86XP1 1220 aa28.03■■■□□ 2.08
NME3-206ENST00000564252 TMEM265A0A087WTH1 108 aa28.02■■■□□ 2.08
NME3-206ENST00000564252 CSF2RAP15509 400 aa28.02■■■□□ 2.08
NME3-206ENST00000564252 CALML3P27482 149 aa28.02■■■□□ 2.08
NME3-206ENST00000564252 NT5C2P49902 561 aa28.02■■■□□ 2.08
NME3-206ENST00000564252 TMEM240Q5SV17 173 aa28.02■■■□□ 2.08
NME3-206ENST00000564252 GPATCH4Q5T3I0 446 aaKnown RBP28.02■■■□□ 2.08
NME3-206ENST00000564252 RNF207Q6ZRF8 634 aa28.02■■■□□ 2.08
NME3-206ENST00000564252 TMEM199Q8N511 208 aa28.02■■■□□ 2.08
NME3-206ENST00000564252 PRUNE2Q8WUY3 3088 aa28.02■■■□□ 2.08
NME3-206ENST00000564252 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.01■■■□□ 2.07
NME3-206ENST00000564252 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.01■■■□□ 2.07
NME3-206ENST00000564252 RBM47A0AV96 593 aaKnown RBP28.01■■■□□ 2.07
NME3-206ENST00000564252 HIP1O00291 1037 aa28.01■■■□□ 2.07
NME3-206ENST00000564252 KDM4AO75164 1064 aa28.01■■■□□ 2.07
NME3-206ENST00000564252 GOLGA8HP0CJ92 632 aa28.01■■■□□ 2.07
NME3-206ENST00000564252 RPS6P62753 249 aaKnown RBP28.01■■■□□ 2.07
NME3-206ENST00000564252 WDR11Q9BZH6 1224 aa28.01■■■□□ 2.07
NME3-206ENST00000564252 CYP2C18P33260 490 aa28■■■□□ 2.07
NME3-206ENST00000564252 RASIP1Q5U651 963 aa28■■■□□ 2.07
NME3-206ENST00000564252 IQCA1Q86XH1 822 aa28■■■□□ 2.07
NME3-206ENST00000564252 PNMA1Q8ND90 353 aa28■■■□□ 2.07
NME3-206ENST00000564252 MYLIPQ8WY64 445 aa28■■■□□ 2.07
NME3-206ENST00000564252 DSCC1Q9BVC3 393 aa28■■■□□ 2.07
NME3-206ENST00000564252 SEZ6LQ9BYH1 1024 aa28■■■□□ 2.07
NME3-206ENST00000564252 CPVLQ9H3G5 476 aa28■■■□□ 2.07
NME3-206ENST00000564252 EDNRBP24530 442 aa27.99■■■□□ 2.07
NME3-206ENST00000564252 PSMC6P62333 389 aa27.99■■■□□ 2.07
NME3-206ENST00000564252 CCDC178Q5BJE1 867 aa27.99■■■□□ 2.07
NME3-206ENST00000564252 ANKS1AQ92625 1134 aa27.99■■■□□ 2.07
NME3-206ENST00000564252 B4E1Z4 1266 aa27.98■■■□□ 2.07
NME3-206ENST00000564252 ACRP10323 421 aa27.98■■■□□ 2.07
NME3-206ENST00000564252 DNAJB2P25686 324 aa27.98■■■□□ 2.07
NME3-206ENST00000564252 PSRC1Q6PGN9 363 aaPredicted RBP27.98■■■□□ 2.07
NME3-206ENST00000564252 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.98■■■□□ 2.07
NME3-206ENST00000564252 DNERQ8NFT8 737 aa27.98■■■□□ 2.07
NME3-206ENST00000564252 UBA5Q9GZZ9 404 aa27.98■■■□□ 2.07
NME3-206ENST00000564252 HIPK3Q9H422 1215 aa27.98■■■□□ 2.07
NME3-206ENST00000564252 UMODL1Q5DID0 1318 aa27.97■■■□□ 2.07
NME3-206ENST00000564252 B4GALT4O60513 344 aa27.97■■■□□ 2.07
NME3-206ENST00000564252 USH1GQ495M9 461 aa27.97■■■□□ 2.07
NME3-206ENST00000564252 ZNF365Q70YC5 407 aa27.97■■■□□ 2.07
NME3-206ENST00000564252 ENAHQ8N8S7 591 aaPredicted RBP27.97■■■□□ 2.07
NME3-206ENST00000564252 ZSCAN10Q96SZ4 725 aaPredicted RBP27.97■■■□□ 2.07
NME3-206ENST00000564252 TRPV6Q9H1D0 765 aa27.97■■■□□ 2.07
NME3-206ENST00000564252 IL23AQ9NPF7 189 aa27.97■■■□□ 2.07
NME3-206ENST00000564252 VCANP13611 3396 aa27.96■■■□□ 2.07
NME3-206ENST00000564252 PDE4DQ08499 809 aa27.96■■■□□ 2.07
NME3-206ENST00000564252 IMMTQ16891 758 aaKnown RBP27.96■■■□□ 2.07
NME3-206ENST00000564252 RGS22Q8NE09 1264 aa27.96■■■□□ 2.07
NME3-206ENST00000564252 MAFAQ8NHW3 353 aaPredicted RBP27.96■■■□□ 2.07
NME3-206ENST00000564252 KAT14Q9H8E8 782 aa27.96■■■□□ 2.07
NME3-206ENST00000564252 POLR3EQ9NVU0 708 aa27.96■■■□□ 2.07
NME3-206ENST00000564252 ZSWIM5Q9P217 1185 aa27.96■■■□□ 2.07
NME3-206ENST00000564252 CHD9Q3L8U1 2897 aa27.95■■■□□ 2.07
NME3-206ENST00000564252 CDC37Q16543 378 aaPredicted RBP27.95■■■□□ 2.06
NME3-206ENST00000564252 OR6J1Q8NGC5 347 aa27.95■■■□□ 2.06
NME3-206ENST00000564252 MPHOSPH6Q99547 160 aaKnown RBP27.95■■■□□ 2.06
NME3-206ENST00000564252 NOC4LQ9BVI4 516 aaKnown RBP27.95■■■□□ 2.06
NME3-206ENST00000564252 IL25Q9H293 177 aa27.95■■■□□ 2.06
NME3-206ENST00000564252 CPT1AP50416 773 aa27.94■■■□□ 2.06
NME3-206ENST00000564252 PURAQ00577 322 aaKnown RBP27.94■■■□□ 2.06
NME3-206ENST00000564252 ADGRF4Q8IZF3 695 aa27.94■■■□□ 2.06
NME3-206ENST00000564252 ALDH8A1Q9H2A2 487 aaPredicted RBP27.94■■■□□ 2.06
NME3-206ENST00000564252 CTNNA3Q9UI47 895 aa27.94■■■□□ 2.06
NME3-206ENST00000564252 TNKSO95271 1327 aa27.93■■■□□ 2.06
NME3-206ENST00000564252 NKRFO15226 690 aaKnown RBP eCLIP27.93■■■□□ 2.06
NME3-206ENST00000564252 FOSL2P15408 326 aa27.93■■■□□ 2.06
NME3-206ENST00000564252 GRIN2CQ14957 1233 aa27.93■■■□□ 2.06
NME3-206ENST00000564252 PPP2R5BQ15173 497 aa27.93■■■□□ 2.06
NME3-206ENST00000564252 ASPRV1Q53RT3 343 aa27.93■■■□□ 2.06
NME3-206ENST00000564252 SCFD2Q8WU76 684 aa27.93■■■□□ 2.06
NME3-206ENST00000564252 TIFAQ96CG3 184 aa27.93■■■□□ 2.06
NME3-206ENST00000564252 WNT8AQ9H1J5 351 aa27.93■■■□□ 2.06
NME3-206ENST00000564252 GRXCR1A8MXD5 290 aa27.92■■■□□ 2.06
NME3-206ENST00000564252 MYL3P08590 195 aa27.92■■■□□ 2.06
NME3-206ENST00000564252 PDE4AP27815 886 aa27.92■■■□□ 2.06
NME3-206ENST00000564252 CCL23P55773 120 aa27.92■■■□□ 2.06
NME3-206ENST00000564252 HERVK_113Q902F9 699 aa27.92■■■□□ 2.06
NME3-206ENST00000564252 TBC1D5Q92609 795 aa27.92■■■□□ 2.06
NME3-206ENST00000564252 PBX4Q9BYU1 374 aa27.92■■■□□ 2.06
NME3-206ENST00000564252 KRT23Q9C075 422 aa27.92■■■□□ 2.06
NME3-206ENST00000564252 MAF1Q9H063 256 aa27.92■■■□□ 2.06
NME3-206ENST00000564252 ABCB11O95342 1321 aa27.92■■■□□ 2.06
NME3-206ENST00000564252 SCN10AQ9Y5Y9 1956 aa27.91■■■□□ 2.06
NME3-206ENST00000564252 PBX2P40425 430 aa27.91■■■□□ 2.06
NME3-206ENST00000564252 COPS5Q92905 334 aa27.91■■■□□ 2.06
NME3-206ENST00000564252 MTG1Q9BT17 334 aaPredicted RBP27.91■■■□□ 2.06
NME3-206ENST00000564252 ZNF576Q9H609 170 aa27.91■■■□□ 2.06
NME3-206ENST00000564252 CNNM2Q9H8M5 875 aa27.91■■■□□ 2.06
NME3-206ENST00000564252 B4DLN1 442 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms