RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 GPNMBQ14956 572 aa13.37□□□□□ -0.27
HDGFL3-204ENST00000563790 FSCN1Q16658 493 aaKnown RBP13.37□□□□□ -0.27
HDGFL3-204ENST00000563790 LMBR1LQ6UX01 489 aa13.37□□□□□ -0.27
HDGFL3-204ENST00000563790 TMEM121BQ9BXQ6 578 aaPredicted RBP13.37□□□□□ -0.27
HDGFL3-204ENST00000563790 DNAJC18Q9H819 358 aa13.37□□□□□ -0.27
HDGFL3-204ENST00000563790 MYH7BA7E2Y1 1941 aa13.37□□□□□ -0.27
HDGFL3-204ENST00000563790 MAPK8IP3Q9UPT6 1336 aa13.37□□□□□ -0.27
HDGFL3-204ENST00000563790 NOTCH2Q04721 2471 aa13.36□□□□□ -0.27
HDGFL3-204ENST00000563790 SLC25A27O95847 323 aa13.36□□□□□ -0.27
HDGFL3-204ENST00000563790 SMPD1P17405 629 aa13.36□□□□□ -0.27
HDGFL3-204ENST00000563790 BFSP2Q13515 415 aa13.36□□□□□ -0.27
HDGFL3-204ENST00000563790 METTL16Q86W50 562 aaKnown RBP13.36□□□□□ -0.27
HDGFL3-204ENST00000563790 ABHD16BQ9H3Z7 469 aa13.36□□□□□ -0.27
HDGFL3-204ENST00000563790 CREBBPQ92793 2442 aa13.36□□□□□ -0.27
HDGFL3-204ENST00000563790 C5orf67F2Z3F1 127 aa13.35□□□□□ -0.27
HDGFL3-204ENST00000563790 GRM6O15303 877 aa13.35□□□□□ -0.27
HDGFL3-204ENST00000563790 GLP2RO95838 553 aa13.35□□□□□ -0.27
HDGFL3-204ENST00000563790 TCTN1Q2MV58 587 aa13.35□□□□□ -0.27
HDGFL3-204ENST00000563790 LARP1BQ659C4 914 aaKnown RBP13.35□□□□□ -0.27
HDGFL3-204ENST00000563790 TMEFF1Q8IYR6 380 aa13.35□□□□□ -0.27
HDGFL3-204ENST00000563790 VGLL2Q8N8G2 317 aa13.35□□□□□ -0.27
HDGFL3-204ENST00000563790 MYH16Q9H6N6 1097 aa13.35□□□□□ -0.27
HDGFL3-204ENST00000563790 PARD6AQ9NPB6 346 aa13.35□□□□□ -0.27
HDGFL3-204ENST00000563790 BARX2Q9UMQ3 279 aaPredicted RBP13.35□□□□□ -0.27
HDGFL3-204ENST00000563790 NAV1Q8NEY1 1877 aa13.35□□□□□ -0.27
HDGFL3-204ENST00000563790 SPTLC1O15269 473 aa13.34□□□□□ -0.27
HDGFL3-204ENST00000563790 ZEB2O60315 1214 aa13.34□□□□□ -0.27
HDGFL3-204ENST00000563790 CXCL10P02778 98 aa13.34□□□□□ -0.27
HDGFL3-204ENST00000563790 LMOD3Q0VAK6 560 aa13.34□□□□□ -0.27
HDGFL3-204ENST00000563790 SLF2Q8IX21 1173 aa13.34□□□□□ -0.27
HDGFL3-204ENST00000563790 MAGEB6Q8N7X4 407 aa13.34□□□□□ -0.27
HDGFL3-204ENST00000563790 PPP2R3CQ969Q6 453 aa13.34□□□□□ -0.27
HDGFL3-204ENST00000563790 PLXNA4Q9HCM2 1894 aa13.33□□□□□ -0.27
HDGFL3-204ENST00000563790 GPR75-ASB3A0A0A6YYF3 556 aa13.33□□□□□ -0.28
HDGFL3-204ENST00000563790 PDE8BO95263 885 aa13.33□□□□□ -0.28
HDGFL3-204ENST00000563790 RB1P06400 928 aa13.33□□□□□ -0.28
HDGFL3-204ENST00000563790 BBC3Q96PG8 261 aaPredicted RBP13.33□□□□□ -0.28
HDGFL3-204ENST00000563790 LAS1LQ9Y4W2 734 aaKnown RBP13.33□□□□□ -0.28
HDGFL3-204ENST00000563790 GREB1Q4ZG55 1949 aa13.33□□□□□ -0.28
HDGFL3-204ENST00000563790 MAP4K4O95819 1239 aaPredicted RBP13.32□□□□□ -0.28
HDGFL3-204ENST00000563790 CNGB1Q14028 1251 aaPredicted RBP13.32□□□□□ -0.28
HDGFL3-204ENST00000563790 IKBKEQ14164 716 aa13.32□□□□□ -0.28
HDGFL3-204ENST00000563790 POLA2Q14181 598 aa13.32□□□□□ -0.28
HDGFL3-204ENST00000563790 ZNF467Q7Z7K2 595 aaPredicted RBP13.32□□□□□ -0.28
HDGFL3-204ENST00000563790 C11orf84Q9BUA3 381 aaPredicted RBP13.32□□□□□ -0.28
HDGFL3-204ENST00000563790 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.32□□□□□ -0.28
HDGFL3-204ENST00000563790 GNEQ9Y223 722 aaKnown RBP13.32□□□□□ -0.28
HDGFL3-204ENST00000563790 NR2E1Q9Y466 385 aa13.32□□□□□ -0.28
HDGFL3-204ENST00000563790 MROH7-TTC4A0A0A0MT08 1334 aa13.32□□□□□ -0.28
HDGFL3-204ENST00000563790 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.31□□□□□ -0.28
HDGFL3-204ENST00000563790 EIF4E1BA6NMX2 242 aaKnown RBP13.31□□□□□ -0.28
HDGFL3-204ENST00000563790 PARNO95453 639 aaKnown RBP13.31□□□□□ -0.28
HDGFL3-204ENST00000563790 GH2P01242 217 aa13.31□□□□□ -0.28
HDGFL3-204ENST00000563790 MMP1P03956 469 aa13.31□□□□□ -0.28
HDGFL3-204ENST00000563790 SP100P23497 879 aaPredicted RBP13.31□□□□□ -0.28
HDGFL3-204ENST00000563790 TLK2Q86UE8 772 aa13.31□□□□□ -0.28
HDGFL3-204ENST00000563790 PDZD3Q86UT5 571 aa13.31□□□□□ -0.28
HDGFL3-204ENST00000563790 GLIS3Q8NEA6 775 aa13.31□□□□□ -0.28
HDGFL3-204ENST00000563790 ACER1Q8TDN7 264 aa13.31□□□□□ -0.28
HDGFL3-204ENST00000563790 AFAP1L1Q8TED9 768 aa13.31□□□□□ -0.28
HDGFL3-204ENST00000563790 DHX36Q9H2U1 1008 aaKnown RBP13.31□□□□□ -0.28
HDGFL3-204ENST00000563790 APC2O95996 2303 aa13.3□□□□□ -0.28
HDGFL3-204ENST00000563790 FBN2P35556 2912 aa13.3□□□□□ -0.28
HDGFL3-204ENST00000563790 IFIT1P09914 478 aaKnown RBP13.3□□□□□ -0.28
HDGFL3-204ENST00000563790 CTNNB1P35222 781 aa13.3□□□□□ -0.28
HDGFL3-204ENST00000563790 CAMK1Q14012 370 aa13.3□□□□□ -0.28
HDGFL3-204ENST00000563790 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.3□□□□□ -0.28
HDGFL3-204ENST00000563790 DZIP1Q86YF9 867 aaKnown RBP13.3□□□□□ -0.28
HDGFL3-204ENST00000563790 ZCCHC14Q8WYQ9 949 aaKnown RBP13.3□□□□□ -0.28
HDGFL3-204ENST00000563790 KATNBL1Q9H079 304 aa13.3□□□□□ -0.28
HDGFL3-204ENST00000563790 PNNQ9H307 717 aaKnown RBP13.3□□□□□ -0.28
HDGFL3-204ENST00000563790 SMG5Q9UPR3 1016 aaKnown RBP13.3□□□□□ -0.28
HDGFL3-204ENST00000563790 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.3□□□□□ -0.28
HDGFL3-204ENST00000563790 DENND4AQ7Z401 1863 aa13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 NBNO60934 754 aa13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 HSPA5P11021 654 aaKnown RBP13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 FGFR2P21802 821 aa13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 TNFAIP2Q03169 654 aa13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 TMEM132BQ14DG7 1078 aa13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 METTL24Q5JXM2 366 aa13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 ADGRD2Q7Z7M1 963 aa13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 RIOX2Q8IUF8 465 aa13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 FOXP4Q8IVH2 680 aaPredicted RBP13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 CAGE1Q8TC20 777 aa13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 YME1L1Q96TA2 773 aa13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 TANGO6Q9C0B7 1094 aa13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 ERVK-5Q9HDB9 667 aa13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 RELNP78509 3460 aa13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 SPAG17Q6Q759 2223 aa13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 SDK1Q7Z5N4 2213 aa13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 MYH8P13535 1937 aa13.29□□□□□ -0.28
HDGFL3-204ENST00000563790 DNAJC25-GNG10A0A024R161 153 aa13.28□□□□□ -0.28
HDGFL3-204ENST00000563790 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.28□□□□□ -0.28
HDGFL3-204ENST00000563790 AMHP03971 560 aa13.28□□□□□ -0.28
HDGFL3-204ENST00000563790 TBC1D8BQ0IIM8 1120 aa13.28□□□□□ -0.28
HDGFL3-204ENST00000563790 C1orf210Q8IVY1 113 aa13.28□□□□□ -0.28
HDGFL3-204ENST00000563790 MYOCDQ8IZQ8 938 aa13.28□□□□□ -0.28
HDGFL3-204ENST00000563790 GATA6Q92908 595 aa13.28□□□□□ -0.28
HDGFL3-204ENST00000563790 ATG4CQ96DT6 458 aa13.28□□□□□ -0.28
HDGFL3-204ENST00000563790 AP5M1Q9H0R1 490 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms