RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 HERVK_113Q902F9 699 aa19.81■□□□□ 0.76
HDGFL3-203ENST00000563404 VWCEQ96DN2 955 aa19.81■□□□□ 0.76
HDGFL3-203ENST00000563404 NOC4LQ9BVI4 516 aaKnown RBP19.81■□□□□ 0.76
HDGFL3-203ENST00000563404 ZBTB47Q9UFB7 747 aaPredicted RBP19.81■□□□□ 0.76
HDGFL3-203ENST00000563404 ZMYM6O95789 1325 aa19.8■□□□□ 0.76
HDGFL3-203ENST00000563404 PDHBP11177 359 aa19.8■□□□□ 0.76
HDGFL3-203ENST00000563404 CCL23P55773 120 aa19.8■□□□□ 0.76
HDGFL3-203ENST00000563404 DUSP28Q4G0W2 176 aa19.8■□□□□ 0.76
HDGFL3-203ENST00000563404 WNT8AQ9H1J5 351 aa19.8■□□□□ 0.76
HDGFL3-203ENST00000563404 RBM47A0AV96 593 aaKnown RBP19.79■□□□□ 0.76
HDGFL3-203ENST00000563404 ZEB2O60315 1214 aa19.79■□□□□ 0.76
HDGFL3-203ENST00000563404 TBC1D10CQ8IV04 446 aa19.79■□□□□ 0.76
HDGFL3-203ENST00000563404 CCDC171Q6TFL3 1326 aa19.78■□□□□ 0.76
HDGFL3-203ENST00000563404 PTPDC1A2A3K4 754 aa19.78■□□□□ 0.76
HDGFL3-203ENST00000563404 SNHG28P0DPA3 235 aa19.78■□□□□ 0.76
HDGFL3-203ENST00000563404 ZNF543Q08ER8 600 aa19.78■□□□□ 0.76
HDGFL3-203ENST00000563404 WDR11Q9BZH6 1224 aa19.78■□□□□ 0.76
HDGFL3-203ENST00000563404 LNPKQ9C0E8 428 aa19.78■□□□□ 0.76
HDGFL3-203ENST00000563404 ALDH8A1Q9H2A2 487 aaPredicted RBP19.78■□□□□ 0.76
HDGFL3-203ENST00000563404 PRDM6Q9NQX0 595 aa19.78■□□□□ 0.76
HDGFL3-203ENST00000563404 ADD3Q9UEY8 706 aaKnown RBP19.78■□□□□ 0.76
HDGFL3-203ENST00000563404 CHD7Q9P2D1 2997 aa19.78■□□□□ 0.76
HDGFL3-203ENST00000563404 FGBP02675 491 aa19.77■□□□□ 0.76
HDGFL3-203ENST00000563404 CALML3P27482 149 aa19.77■□□□□ 0.76
HDGFL3-203ENST00000563404 AKNAD1Q5T1N1 836 aa19.77■□□□□ 0.76
HDGFL3-203ENST00000563404 OTOP2Q7RTS6 562 aa19.77■□□□□ 0.76
HDGFL3-203ENST00000563404 TICAM2Q86XR7 235 aa19.77■□□□□ 0.76
HDGFL3-203ENST00000563404 SEZ6LQ9BYH1 1024 aa19.77■□□□□ 0.76
HDGFL3-203ENST00000563404 PRDM12Q9H4Q4 367 aa19.77■□□□□ 0.76
HDGFL3-203ENST00000563404 YBX2Q9Y2T7 364 aaKnown RBP19.77■□□□□ 0.76
HDGFL3-203ENST00000563404 NEDD4P46934 1319 aa19.76■□□□□ 0.75
HDGFL3-203ENST00000563404 LOC102724159A0A0B4J2E5 919 aa19.76■□□□□ 0.75
HDGFL3-203ENST00000563404 PURAQ00577 322 aaKnown RBP19.76■□□□□ 0.75
HDGFL3-203ENST00000563404 PWP2Q15269 919 aaKnown RBP19.76■□□□□ 0.75
HDGFL3-203ENST00000563404 SCLYQ96I15 445 aa19.76■□□□□ 0.75
HDGFL3-203ENST00000563404 TTC14Q96N46 770 aa19.76■□□□□ 0.75
HDGFL3-203ENST00000563404 CPVLQ9H3G5 476 aa19.76■□□□□ 0.75
HDGFL3-203ENST00000563404 TRMT13Q9NUP7 481 aaKnown RBP19.76■□□□□ 0.75
HDGFL3-203ENST00000563404 MUC3AQ02505 3323 aa19.75■□□□□ 0.75
HDGFL3-203ENST00000563404 TRIM6-TRIM34B2RNG4 842 aa19.75■□□□□ 0.75
HDGFL3-203ENST00000563404 EDNRBP24530 442 aa19.75■□□□□ 0.75
HDGFL3-203ENST00000563404 RPS6P62753 249 aaKnown RBP19.75■□□□□ 0.75
HDGFL3-203ENST00000563404 ADGRE1Q14246 886 aa19.75■□□□□ 0.75
HDGFL3-203ENST00000563404 RNF207Q6ZRF8 634 aa19.75■□□□□ 0.75
HDGFL3-203ENST00000563404 MFSD6Q6ZSS7 791 aa19.75■□□□□ 0.75
HDGFL3-203ENST00000563404 OR6J1Q8NGC5 347 aa19.75■□□□□ 0.75
HDGFL3-203ENST00000563404 PPP1R13LQ8WUF5 828 aa19.75■□□□□ 0.75
HDGFL3-203ENST00000563404 COPS5Q92905 334 aa19.75■□□□□ 0.75
HDGFL3-203ENST00000563404 RILPL2Q969X0 211 aa19.75■□□□□ 0.75
HDGFL3-203ENST00000563404 ZKSCAN3Q9BRR0 538 aa19.75■□□□□ 0.75
HDGFL3-203ENST00000563404 NKX2-4Q9H2Z4 354 aa19.75■□□□□ 0.75
HDGFL3-203ENST00000563404 TTC28Q96AY4 2481 aa19.74■□□□□ 0.75
HDGFL3-203ENST00000563404 MYL3P08590 195 aa19.74■□□□□ 0.75
HDGFL3-203ENST00000563404 GOLGA8HP0CJ92 632 aa19.74■□□□□ 0.75
HDGFL3-203ENST00000563404 CYP2C9P11712 490 aa19.74■□□□□ 0.75
HDGFL3-203ENST00000563404 SDSP20132 328 aa19.74■□□□□ 0.75
HDGFL3-203ENST00000563404 POLR3EQ9NVU0 708 aa19.74■□□□□ 0.75
HDGFL3-203ENST00000563404 MSRAQ9UJ68 235 aa19.74■□□□□ 0.75
HDGFL3-203ENST00000563404 WDR19Q8NEZ3 1342 aa19.74■□□□□ 0.75
HDGFL3-203ENST00000563404 GBF1Q92538 1859 aa19.73■□□□□ 0.75
HDGFL3-203ENST00000563404 PCP11498 1178 aaKnown RBP19.73■□□□□ 0.75
HDGFL3-203ENST00000563404 RABGGTBP53611 331 aa19.73■□□□□ 0.75
HDGFL3-203ENST00000563404 RAB30Q15771 203 aa19.73■□□□□ 0.75
HDGFL3-203ENST00000563404 B4GALNT3Q6L9W6 998 aa19.73■□□□□ 0.75
HDGFL3-203ENST00000563404 SMC5Q8IY18 1101 aa19.73■□□□□ 0.75
HDGFL3-203ENST00000563404 PPM1EQ8WY54 764 aa19.73■□□□□ 0.75
HDGFL3-203ENST00000563404 GAS2L1Q99501 681 aaPredicted RBP19.73■□□□□ 0.75
HDGFL3-203ENST00000563404 UBA5Q9GZZ9 404 aa19.73■□□□□ 0.75
HDGFL3-203ENST00000563404 TNKSO95271 1327 aa19.73■□□□□ 0.75
HDGFL3-203ENST00000563404 ARIH2O95376 493 aa19.72■□□□□ 0.75
HDGFL3-203ENST00000563404 CPT1AP50416 773 aa19.72■□□□□ 0.75
HDGFL3-203ENST00000563404 PDE4DQ08499 809 aa19.72■□□□□ 0.75
HDGFL3-203ENST00000563404 NBPF20Q3BBV1 942 aa19.72■□□□□ 0.75
HDGFL3-203ENST00000563404 PLEKHM2Q8IWE5 1019 aa19.72■□□□□ 0.75
HDGFL3-203ENST00000563404 TBC1D5Q92609 795 aa19.72■□□□□ 0.75
HDGFL3-203ENST00000563404 MTG1Q9BT17 334 aaPredicted RBP19.72■□□□□ 0.75
HDGFL3-203ENST00000563404 MTIF3Q9H2K0 278 aaKnown RBP19.72■□□□□ 0.75
HDGFL3-203ENST00000563404 IGHDP01880 384 aa19.71■□□□□ 0.75
HDGFL3-203ENST00000563404 MYOGP15173 224 aa19.71■□□□□ 0.75
HDGFL3-203ENST00000563404 TTLL4Q14679 1199 aa19.71■□□□□ 0.75
HDGFL3-203ENST00000563404 PPP2R5BQ15173 497 aa19.71■□□□□ 0.75
HDGFL3-203ENST00000563404 USH1GQ495M9 461 aa19.71■□□□□ 0.75
HDGFL3-203ENST00000563404 DGKHQ86XP1 1220 aa19.71■□□□□ 0.75
HDGFL3-203ENST00000563404 DNERQ8NFT8 737 aa19.71■□□□□ 0.75
HDGFL3-203ENST00000563404 ESR2Q92731 530 aa19.71■□□□□ 0.75
HDGFL3-203ENST00000563404 RNF41Q9H4P4 317 aaPredicted RBP19.71■□□□□ 0.75
HDGFL3-203ENST00000563404 PNMA2Q9UL42 364 aa19.71■□□□□ 0.75
HDGFL3-203ENST00000563404 SCN10AQ9Y5Y9 1956 aa19.71■□□□□ 0.75
HDGFL3-203ENST00000563404 A6NJR5 290 aa19.7■□□□□ 0.74
HDGFL3-203ENST00000563404 NKRFO15226 690 aaKnown RBP eCLIP19.7■□□□□ 0.74
HDGFL3-203ENST00000563404 SUPT20HL2P0C7V6 817 aa19.7■□□□□ 0.74
HDGFL3-203ENST00000563404 TJAP1Q5JTD0 557 aa19.7■□□□□ 0.74
HDGFL3-203ENST00000563404 GPATCH4Q5T3I0 446 aaKnown RBP19.7■□□□□ 0.74
HDGFL3-203ENST00000563404 RPUSD2Q8IZ73 545 aaKnown RBP19.7■□□□□ 0.74
HDGFL3-203ENST00000563404 SCFD2Q8WU76 684 aa19.7■□□□□ 0.74
HDGFL3-203ENST00000563404 OSBPL3Q9H4L5 887 aa19.7■□□□□ 0.74
HDGFL3-203ENST00000563404 SLC4A7Q9Y6M7 1214 aa19.7■□□□□ 0.74
HDGFL3-203ENST00000563404 REV3LO60673 3130 aa19.7■□□□□ 0.74
HDGFL3-203ENST00000563404 MYO9BQ13459 2157 aa19.7■□□□□ 0.74
HDGFL3-203ENST00000563404 ZNF213O14771 459 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms