RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 CSF2RAP15509 400 aa18.5■□□□□ 0.55
CLK3-211ENST00000563297 PWP2Q15269 919 aaKnown RBP18.5■□□□□ 0.55
CLK3-211ENST00000563297 CWC27Q6UX04 472 aaKnown RBP18.5■□□□□ 0.55
CLK3-211ENST00000563297 TMEM199Q8N511 208 aa18.5■□□□□ 0.55
CLK3-211ENST00000563297 EXOC6Q8TAG9 804 aa18.5■□□□□ 0.55
CLK3-211ENST00000563297 MYLIPQ8WY64 445 aa18.5■□□□□ 0.55
CLK3-211ENST00000563297 ESR2Q92731 530 aa18.5■□□□□ 0.55
CLK3-211ENST00000563297 PNMA2Q9UL42 364 aa18.5■□□□□ 0.55
CLK3-211ENST00000563297 NEDD4P46934 1319 aa18.49■□□□□ 0.55
CLK3-211ENST00000563297 TMEM265A0A087WTH1 108 aa18.49■□□□□ 0.55
CLK3-211ENST00000563297 RBM47A0AV96 593 aaKnown RBP18.49■□□□□ 0.55
CLK3-211ENST00000563297 CYP2C18P33260 490 aa18.49■□□□□ 0.55
CLK3-211ENST00000563297 DUSP28Q4G0W2 176 aa18.49■□□□□ 0.55
CLK3-211ENST00000563297 DGKHQ86XP1 1220 aa18.49■□□□□ 0.55
CLK3-211ENST00000563297 WDR11Q9BZH6 1224 aa18.49■□□□□ 0.55
CLK3-211ENST00000563297 GOLGA8HP0CJ92 632 aa18.48■□□□□ 0.55
CLK3-211ENST00000563297 ACRP10323 421 aa18.48■□□□□ 0.55
CLK3-211ENST00000563297 CALML3P27482 149 aa18.48■□□□□ 0.55
CLK3-211ENST00000563297 RPS6P62753 249 aaKnown RBP18.48■□□□□ 0.55
CLK3-211ENST00000563297 GPATCH4Q5T3I0 446 aaKnown RBP18.48■□□□□ 0.55
CLK3-211ENST00000563297 RASIP1Q5U651 963 aa18.48■□□□□ 0.55
CLK3-211ENST00000563297 SLC30A10Q6XR72 485 aa18.48■□□□□ 0.55
CLK3-211ENST00000563297 RNF207Q6ZRF8 634 aa18.48■□□□□ 0.55
CLK3-211ENST00000563297 ZNF365Q70YC5 407 aa18.48■□□□□ 0.55
CLK3-211ENST00000563297 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.48■□□□□ 0.55
CLK3-211ENST00000563297 SEZ6LQ9BYH1 1024 aa18.48■□□□□ 0.55
CLK3-211ENST00000563297 UBA5Q9GZZ9 404 aa18.48■□□□□ 0.55
CLK3-211ENST00000563297 WDR19Q8NEZ3 1342 aa18.48■□□□□ 0.55
CLK3-211ENST00000563297 KDM4AO75164 1064 aa18.47■□□□□ 0.55
CLK3-211ENST00000563297 DNAJB2P25686 324 aa18.47■□□□□ 0.55
CLK3-211ENST00000563297 PSMC6P62333 389 aa18.47■□□□□ 0.55
CLK3-211ENST00000563297 ANKS1AQ92625 1134 aa18.47■□□□□ 0.55
CLK3-211ENST00000563297 TRPV6Q9H1D0 765 aa18.47■□□□□ 0.55
CLK3-211ENST00000563297 CPVLQ9H3G5 476 aa18.47■□□□□ 0.55
CLK3-211ENST00000563297 DIAPH3Q9NSV4 1193 aa18.47■□□□□ 0.55
CLK3-211ENST00000563297 CDH23Q9H251 3354 aa18.47■□□□□ 0.55
CLK3-211ENST00000563297 EYSQ5T1H1 3165 aa18.47■□□□□ 0.55
CLK3-211ENST00000563297 PRUNE2Q8WUY3 3088 aa18.46■□□□□ 0.55
CLK3-211ENST00000563297 GRXCR1A8MXD5 290 aa18.46■□□□□ 0.55
CLK3-211ENST00000563297 HIP1O00291 1037 aa18.46■□□□□ 0.55
CLK3-211ENST00000563297 B4GALT4O60513 344 aa18.46■□□□□ 0.55
CLK3-211ENST00000563297 NT5C2P49902 561 aa18.46■□□□□ 0.55
CLK3-211ENST00000563297 GRIN2CQ14957 1233 aa18.46■□□□□ 0.55
CLK3-211ENST00000563297 CCDC178Q5BJE1 867 aa18.46■□□□□ 0.55
CLK3-211ENST00000563297 IQCA1Q86XH1 822 aa18.46■□□□□ 0.55
CLK3-211ENST00000563297 PNMA1Q8ND90 353 aa18.46■□□□□ 0.55
CLK3-211ENST00000563297 MAFAQ8NHW3 353 aaPredicted RBP18.46■□□□□ 0.55
CLK3-211ENST00000563297 DSCC1Q9BVC3 393 aa18.46■□□□□ 0.55
CLK3-211ENST00000563297 HIPK3Q9H422 1215 aa18.46■□□□□ 0.55
CLK3-211ENST00000563297 IL23AQ9NPF7 189 aa18.46■□□□□ 0.55
CLK3-211ENST00000563297 ZSWIM5Q9P217 1185 aa18.46■□□□□ 0.55
CLK3-211ENST00000563297 UMODL1Q5DID0 1318 aa18.46■□□□□ 0.55
CLK3-211ENST00000563297 B4E1Z4 1266 aa18.45■□□□□ 0.54
CLK3-211ENST00000563297 EDNRBP24530 442 aa18.45■□□□□ 0.54
CLK3-211ENST00000563297 PDE4DQ08499 809 aa18.45■□□□□ 0.54
CLK3-211ENST00000563297 USH1GQ495M9 461 aa18.45■□□□□ 0.54
CLK3-211ENST00000563297 PSRC1Q6PGN9 363 aaPredicted RBP18.45■□□□□ 0.54
CLK3-211ENST00000563297 RGS22Q8NE09 1264 aa18.45■□□□□ 0.54
CLK3-211ENST00000563297 DNERQ8NFT8 737 aa18.45■□□□□ 0.54
CLK3-211ENST00000563297 TBC1D5Q92609 795 aa18.45■□□□□ 0.54
CLK3-211ENST00000563297 NOC4LQ9BVI4 516 aaKnown RBP18.45■□□□□ 0.54
CLK3-211ENST00000563297 FOSL2P15408 326 aa18.44■□□□□ 0.54
CLK3-211ENST00000563297 CCL23P55773 120 aa18.44■□□□□ 0.54
CLK3-211ENST00000563297 PURAQ00577 322 aaKnown RBP18.44■□□□□ 0.54
CLK3-211ENST00000563297 OR6J1Q8NGC5 347 aa18.44■□□□□ 0.54
CLK3-211ENST00000563297 HERVK_113Q902F9 699 aa18.44■□□□□ 0.54
CLK3-211ENST00000563297 TIFAQ96CG3 184 aa18.44■□□□□ 0.54
CLK3-211ENST00000563297 ZSCAN10Q96SZ4 725 aaPredicted RBP18.44■□□□□ 0.54
CLK3-211ENST00000563297 ZNF576Q9H609 170 aa18.44■□□□□ 0.54
CLK3-211ENST00000563297 POLR3EQ9NVU0 708 aa18.44■□□□□ 0.54
CLK3-211ENST00000563297 FGBP02675 491 aa18.43■□□□□ 0.54
CLK3-211ENST00000563297 PBX2P40425 430 aa18.43■□□□□ 0.54
CLK3-211ENST00000563297 CPT1AP50416 773 aa18.43■□□□□ 0.54
CLK3-211ENST00000563297 IMMTQ16891 758 aaKnown RBP18.43■□□□□ 0.54
CLK3-211ENST00000563297 ADGRF4Q8IZF3 695 aa18.43■□□□□ 0.54
CLK3-211ENST00000563297 ENAHQ8N8S7 591 aaPredicted RBP18.43■□□□□ 0.54
CLK3-211ENST00000563297 MPHOSPH6Q99547 160 aaKnown RBP18.43■□□□□ 0.54
CLK3-211ENST00000563297 COL25A1Q9BXS0 654 aaPredicted RBP18.43■□□□□ 0.54
CLK3-211ENST00000563297 PBX4Q9BYU1 374 aa18.43■□□□□ 0.54
CLK3-211ENST00000563297 ALDH8A1Q9H2A2 487 aaPredicted RBP18.43■□□□□ 0.54
CLK3-211ENST00000563297 KAT14Q9H8E8 782 aa18.43■□□□□ 0.54
CLK3-211ENST00000563297 CTNNA3Q9UI47 895 aa18.43■□□□□ 0.54
CLK3-211ENST00000563297 LAMA4Q16363 1823 aa18.42■□□□□ 0.54
CLK3-211ENST00000563297 B4DLN1 442 aa18.42■□□□□ 0.54
CLK3-211ENST00000563297 NKRFO15226 690 aaKnown RBP eCLIP18.42■□□□□ 0.54
CLK3-211ENST00000563297 MYL3P08590 195 aa18.42■□□□□ 0.54
CLK3-211ENST00000563297 MRPL12P52815 198 aaKnown RBP18.42■□□□□ 0.54
CLK3-211ENST00000563297 CDC37Q16543 378 aaPredicted RBP18.42■□□□□ 0.54
CLK3-211ENST00000563297 SCFD2Q8WU76 684 aa18.42■□□□□ 0.54
CLK3-211ENST00000563297 COPS5Q92905 334 aa18.42■□□□□ 0.54
CLK3-211ENST00000563297 MAF1Q9H063 256 aa18.42■□□□□ 0.54
CLK3-211ENST00000563297 WNT8AQ9H1J5 351 aa18.42■□□□□ 0.54
CLK3-211ENST00000563297 CXXC1Q9P0U4 656 aaPredicted RBP18.42■□□□□ 0.54
CLK3-211ENST00000563297 A6NJR5 290 aa18.41■□□□□ 0.54
CLK3-211ENST00000563297 PPP2R5BQ15173 497 aa18.41■□□□□ 0.54
CLK3-211ENST00000563297 ASPRV1Q53RT3 343 aa18.41■□□□□ 0.54
CLK3-211ENST00000563297 OTOP2Q7RTS6 562 aa18.41■□□□□ 0.54
CLK3-211ENST00000563297 VWCEQ96DN2 955 aa18.41■□□□□ 0.54
CLK3-211ENST00000563297 MTG1Q9BT17 334 aaPredicted RBP18.41■□□□□ 0.54
CLK3-211ENST00000563297 KRT23Q9C075 422 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms