RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 GSG1L2A8MUP6 293 aa9.96□□□□□ -0.82
CKLF-208ENST00000563092 RFXAPO00287 272 aa9.96□□□□□ -0.82
CKLF-208ENST00000563092 LPXNO60711 386 aa9.96□□□□□ -0.82
CKLF-208ENST00000563092 ARHGEF15O94989 841 aa9.96□□□□□ -0.82
CKLF-208ENST00000563092 CA3P07451 260 aa9.96□□□□□ -0.82
CKLF-208ENST00000563092 PTGS1P23219 599 aa9.96□□□□□ -0.82
CKLF-208ENST00000563092 TAP1Q03518 808 aa9.96□□□□□ -0.82
CKLF-208ENST00000563092 TMEM67Q5HYA8 995 aa9.96□□□□□ -0.82
CKLF-208ENST00000563092 TMEM31Q5JXX7 168 aa9.96□□□□□ -0.82
CKLF-208ENST00000563092 IQSEC1Q6DN90 963 aa9.96□□□□□ -0.82
CKLF-208ENST00000563092 SIRT2Q8IXJ6 389 aa9.96□□□□□ -0.82
CKLF-208ENST00000563092 PHOSPHO2Q8TCD6 241 aa9.96□□□□□ -0.82
CKLF-208ENST00000563092 SCLYQ96I15 445 aa9.96□□□□□ -0.82
CKLF-208ENST00000563092 STRBPQ96SI9 672 aaKnown RBP9.96□□□□□ -0.82
CKLF-208ENST00000563092 MTMR4Q9NYA4 1195 aa9.96□□□□□ -0.82
CKLF-208ENST00000563092 PRRC2BQ5JSZ5 2229 aaKnown RBP9.96□□□□□ -0.82
CKLF-208ENST00000563092 PLIN4Q96Q06 1357 aa9.96□□□□□ -0.82
CKLF-208ENST00000563092 TCF20Q9UGU0 1960 aaKnown RBP9.95□□□□□ -0.82
CKLF-208ENST00000563092 PI4K2BG5E9Z4 385 aa9.95□□□□□ -0.82
CKLF-208ENST00000563092 PLA2G6O60733 806 aa9.95□□□□□ -0.82
CKLF-208ENST00000563092 IFIT2P09913 472 aaKnown RBP9.95□□□□□ -0.82
CKLF-208ENST00000563092 PSMC6P62333 389 aa9.95□□□□□ -0.82
CKLF-208ENST00000563092 TMEM63BQ5T3F8 832 aa9.95□□□□□ -0.82
CKLF-208ENST00000563092 KRT40Q6A162 431 aa9.95□□□□□ -0.82
CKLF-208ENST00000563092 FTSJ3Q8IY81 847 aaKnown RBP9.95□□□□□ -0.82
CKLF-208ENST00000563092 KIFC2Q96AC6 838 aa9.95□□□□□ -0.82
CKLF-208ENST00000563092 CEP95Q96GE4 821 aa9.95□□□□□ -0.82
CKLF-208ENST00000563092 DDRGK1Q96HY6 314 aa9.95□□□□□ -0.82
CKLF-208ENST00000563092 SLC9A7Q96T83 725 aa9.95□□□□□ -0.82
CKLF-208ENST00000563092 BOLA2Q9H3K6 86 aa9.95□□□□□ -0.82
CKLF-208ENST00000563092 ACAD9Q9H845 621 aa9.95□□□□□ -0.82
CKLF-208ENST00000563092 PDGFCQ9NRA1 345 aa9.95□□□□□ -0.82
CKLF-208ENST00000563092 CLIP2Q9UDT6 1046 aa9.95□□□□□ -0.82
CKLF-208ENST00000563092 RBM47A0AV96 593 aaKnown RBP9.94□□□□□ -0.82
CKLF-208ENST00000563092 DYNC1LI2O43237 492 aaPredicted RBP9.94□□□□□ -0.82
CKLF-208ENST00000563092 GTPBP6O43824 516 aaPredicted RBP9.94□□□□□ -0.82
CKLF-208ENST00000563092 RAD21O60216 631 aa9.94□□□□□ -0.82
CKLF-208ENST00000563092 ZEB2O60315 1214 aa9.94□□□□□ -0.82
CKLF-208ENST00000563092 RAB11FIP3O75154 756 aa9.94□□□□□ -0.82
CKLF-208ENST00000563092 SUPT20HL2P0C7V6 817 aa9.94□□□□□ -0.82
CKLF-208ENST00000563092 RFC2P35250 354 aa9.94□□□□□ -0.82
CKLF-208ENST00000563092 PURAQ00577 322 aaKnown RBP9.94□□□□□ -0.82
CKLF-208ENST00000563092 TKFCQ3LXA3 575 aa9.94□□□□□ -0.82
CKLF-208ENST00000563092 DUSP28Q4G0W2 176 aa9.94□□□□□ -0.82
CKLF-208ENST00000563092 MICALL1Q8N3F8 863 aa9.94□□□□□ -0.82
CKLF-208ENST00000563092 HLA-CQ95604 372 aa9.94□□□□□ -0.82
CKLF-208ENST00000563092 GMCL1Q96IK5 515 aa9.94□□□□□ -0.82
CKLF-208ENST00000563092 AP5M1Q9H0R1 490 aa9.94□□□□□ -0.82
CKLF-208ENST00000563092 VTA1Q9NP79 307 aa9.94□□□□□ -0.82
CKLF-208ENST00000563092 CD320Q9NPF0 282 aa9.94□□□□□ -0.82
CKLF-208ENST00000563092 TRMT13Q9NUP7 481 aaKnown RBP9.94□□□□□ -0.82
CKLF-208ENST00000563092 LMCD1Q9NZU5 365 aa9.94□□□□□ -0.82
CKLF-208ENST00000563092 DDX49Q9Y6V7 483 aaKnown RBP9.94□□□□□ -0.82
CKLF-208ENST00000563092 MUC6Q6W4X9 2439 aa9.93□□□□□ -0.82
CKLF-208ENST00000563092 TNKSO95271 1327 aa9.93□□□□□ -0.82
CKLF-208ENST00000563092 LOC102724159A0A0B4J2E5 919 aa9.93□□□□□ -0.82
CKLF-208ENST00000563092 CCER2I3L3R5 266 aa9.93□□□□□ -0.82
CKLF-208ENST00000563092 TTLL1O95922 423 aa9.93□□□□□ -0.82
CKLF-208ENST00000563092 BMP3P12645 472 aa9.93□□□□□ -0.82
CKLF-208ENST00000563092 GRB10Q13322 594 aa9.93□□□□□ -0.82
CKLF-208ENST00000563092 PWP2Q15269 919 aaKnown RBP9.93□□□□□ -0.82
CKLF-208ENST00000563092 ZSCAN25Q6NSZ9 544 aa9.93□□□□□ -0.82
CKLF-208ENST00000563092 HERC6Q8IVU3 1022 aa9.93□□□□□ -0.82
CKLF-208ENST00000563092 RNF166Q96A37 237 aaPredicted RBP9.93□□□□□ -0.82
CKLF-208ENST00000563092 MKNK2Q9HBH9 465 aa9.93□□□□□ -0.82
CKLF-208ENST00000563092 EPB41L4AQ9HCS5 686 aaPredicted RBP9.93□□□□□ -0.82
CKLF-208ENST00000563092 RNF146Q9NTX7 359 aa9.93□□□□□ -0.82
CKLF-208ENST00000563092 CYP39A1Q9NYL5 469 aa9.93□□□□□ -0.82
CKLF-208ENST00000563092 LCTP09848 1927 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.92□□□□□ -0.82
CKLF-208ENST00000563092 ZBBXA8MT70 800 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 IQCF3P0C7M6 154 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 CYP2C9P11712 490 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 NOVP48745 357 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 SLC4A3P48751 1232 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 STAT2P52630 851 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 SKIV2LQ15477 1246 aaKnown RBP9.92□□□□□ -0.82
CKLF-208ENST00000563092 SLFN13Q68D06 897 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 NOL8Q76FK4 1167 aaKnown RBP9.92□□□□□ -0.82
CKLF-208ENST00000563092 SPRED2Q7Z698 418 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 FAM160B2Q86V87 743 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 FBXO16Q8IX29 292 aaPredicted RBP9.92□□□□□ -0.82
CKLF-208ENST00000563092 LRRC47Q8N1G4 583 aaKnown RBP9.92□□□□□ -0.82
CKLF-208ENST00000563092 NEDD1Q8NHV4 660 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 STAG1Q8WVM7 1258 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 OSBP2Q969R2 916 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 TRERF1Q96PN7 1200 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 HOMER2Q9NSB8 354 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 POLR3EQ9NVU0 708 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 COG6Q9Y2V7 657 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 CTDP1Q9Y5B0 961 aaPredicted RBP9.92□□□□□ -0.82
CKLF-208ENST00000563092 SCN10AQ9Y5Y9 1956 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 MYH7P12883 1935 aa9.92□□□□□ -0.82
CKLF-208ENST00000563092 COL4A4P53420 1690 aaPredicted RBP9.91□□□□□ -0.82
CKLF-208ENST00000563092 PRR33A8MZF0 331 aa9.91□□□□□ -0.82
CKLF-208ENST00000563092 TMEM232C9JQI7 657 aa9.91□□□□□ -0.82
CKLF-208ENST00000563092 BAIAP3O94812 1187 aa9.91□□□□□ -0.82
CKLF-208ENST00000563092 ACTN1P12814 892 aa9.91□□□□□ -0.82
CKLF-208ENST00000563092 PTPN11Q06124 597 aaPredicted RBP9.91□□□□□ -0.82
CKLF-208ENST00000563092 GPNMBQ14956 572 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms