RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 TM6SF1Q9BZW5 370 aa21.68■■□□□ 1.06
CDH11-206ENST00000562998 DDX49Q9Y6V7 483 aaKnown RBP21.68■■□□□ 1.06
CDH11-206ENST00000562998 CALML3P27482 149 aa21.67■■□□□ 1.06
CDH11-206ENST00000562998 ALDH5A1P51649 535 aaPredicted RBP21.67■■□□□ 1.06
CDH11-206ENST00000562998 HSD17B4P51659 736 aa21.67■■□□□ 1.06
CDH11-206ENST00000562998 TMTC3Q6ZXV5 915 aa21.67■■□□□ 1.06
CDH11-206ENST00000562998 NECAB2Q7Z6G3 386 aa21.67■■□□□ 1.06
CDH11-206ENST00000562998 HOMER1Q86YM7 354 aa21.67■■□□□ 1.06
CDH11-206ENST00000562998 MCF2L2Q86YR7 1114 aa21.67■■□□□ 1.06
CDH11-206ENST00000562998 IL17RAQ96F46 866 aa21.67■■□□□ 1.06
CDH11-206ENST00000562998 FAM217BQ9NTX9 383 aaPredicted RBP21.67■■□□□ 1.06
CDH11-206ENST00000562998 COL20A1Q9P218 1284 aa21.67■■□□□ 1.06
CDH11-206ENST00000562998 ADD3Q9UEY8 706 aaKnown RBP21.67■■□□□ 1.06
CDH11-206ENST00000562998 PCDHA1Q9Y5I3 950 aa21.67■■□□□ 1.06
CDH11-206ENST00000562998 ADCY6O43306 1168 aa21.66■■□□□ 1.06
CDH11-206ENST00000562998 CASTP20810 708 aaKnown RBP21.66■■□□□ 1.06
CDH11-206ENST00000562998 EVCP57679 992 aa21.66■■□□□ 1.06
CDH11-206ENST00000562998 FUT2Q10981 343 aa21.66■■□□□ 1.06
CDH11-206ENST00000562998 TRAF1Q13077 416 aa21.66■■□□□ 1.06
CDH11-206ENST00000562998 ANO1Q5XXA6 986 aa21.66■■□□□ 1.06
CDH11-206ENST00000562998 Q6ZUG5 572 aa21.66■■□□□ 1.06
CDH11-206ENST00000562998 MICU3Q86XE3 530 aa21.66■■□□□ 1.06
CDH11-206ENST00000562998 RAB11FIP4Q86YS3 637 aa21.66■■□□□ 1.06
CDH11-206ENST00000562998 SAMD3Q8N6K7 520 aa21.66■■□□□ 1.06
CDH11-206ENST00000562998 SYTL5Q8TDW5 730 aaPredicted RBP21.66■■□□□ 1.06
CDH11-206ENST00000562998 MAP3K20Q9NYL2 800 aaKnown RBP21.66■■□□□ 1.06
CDH11-206ENST00000562998 FAM184BQ9ULE4 1060 aa21.66■■□□□ 1.06
CDH11-206ENST00000562998 NID2Q14112 1375 aa21.65■■□□□ 1.06
CDH11-206ENST00000562998 DNM1LO00429 736 aa21.65■■□□□ 1.06
CDH11-206ENST00000562998 ZBTB43O43298 467 aa21.65■■□□□ 1.06
CDH11-206ENST00000562998 CCDC144BQ3MJ40 725 aa21.65■■□□□ 1.06
CDH11-206ENST00000562998 TAPT1Q6NXT6 567 aa21.65■■□□□ 1.06
CDH11-206ENST00000562998 SYNE3Q6ZMZ3 975 aa21.65■■□□□ 1.06
CDH11-206ENST00000562998 RUFY3Q7L099 469 aa21.65■■□□□ 1.06
CDH11-206ENST00000562998 CMTR1Q8N1G2 835 aaKnown RBP21.65■■□□□ 1.06
CDH11-206ENST00000562998 ZHX1Q9UKY1 873 aaPredicted RBP21.65■■□□□ 1.06
CDH11-206ENST00000562998 ALPK3Q96L96 1907 aa21.65■■□□□ 1.06
CDH11-206ENST00000562998 KLF18A0A0U1RQI7 1052 aa21.64■■□□□ 1.05
CDH11-206ENST00000562998 RARBP10826 455 aa21.64■■□□□ 1.05
CDH11-206ENST00000562998 NKX3-2P78367 333 aa21.64■■□□□ 1.05
CDH11-206ENST00000562998 ARRDC4Q8NCT1 418 aa21.64■■□□□ 1.05
CDH11-206ENST00000562998 BRF1Q92994 677 aa21.64■■□□□ 1.05
CDH11-206ENST00000562998 LENG1Q96BZ8 264 aaPredicted RBP21.64■■□□□ 1.05
CDH11-206ENST00000562998 RRP36Q96EU6 259 aaKnown RBP21.64■■□□□ 1.05
CDH11-206ENST00000562998 C11orf49Q9H6J7 331 aa21.64■■□□□ 1.05
CDH11-206ENST00000562998 RBM28Q9NW13 759 aaKnown RBP21.64■■□□□ 1.05
CDH11-206ENST00000562998 ADAMTS4O75173 837 aa21.63■■□□□ 1.05
CDH11-206ENST00000562998 DUSP11O75319 330 aaKnown RBP21.63■■□□□ 1.05
CDH11-206ENST00000562998 SEC24BO95487 1268 aa21.63■■□□□ 1.05
CDH11-206ENST00000562998 APOBRQ0VD83 1088 aa21.63■■□□□ 1.05
CDH11-206ENST00000562998 PPP2R5BQ15173 497 aa21.63■■□□□ 1.05
CDH11-206ENST00000562998 LRRC41Q15345 812 aa21.63■■□□□ 1.05
CDH11-206ENST00000562998 TAAR1Q96RJ0 339 aa21.63■■□□□ 1.05
CDH11-206ENST00000562998 HTATIP2Q9BUP3 242 aa21.63■■□□□ 1.05
CDH11-206ENST00000562998 VTA1Q9NP79 307 aa21.63■■□□□ 1.05
CDH11-206ENST00000562998 XPNPEP3Q9NQH7 507 aa21.63■■□□□ 1.05
CDH11-206ENST00000562998 DNAH12Q6ZR08 3092 aa21.63■■□□□ 1.05
CDH11-206ENST00000562998 CNTNAP5Q8WYK1 1306 aa21.62■■□□□ 1.05
CDH11-206ENST00000562998 RBM47A0AV96 593 aaKnown RBP21.62■■□□□ 1.05
CDH11-206ENST00000562998 CDC27P30260 824 aa21.62■■□□□ 1.05
CDH11-206ENST00000562998 ANAPC15P60006 121 aa21.62■■□□□ 1.05
CDH11-206ENST00000562998 TOB2Q14106 344 aaPredicted RBP21.62■■□□□ 1.05
CDH11-206ENST00000562998 RTN1Q16799 776 aa21.62■■□□□ 1.05
CDH11-206ENST00000562998 UPF3AQ9H1J1 476 aaKnown RBP21.62■■□□□ 1.05
CDH11-206ENST00000562998 PDGFCQ9NRA1 345 aa21.62■■□□□ 1.05
CDH11-206ENST00000562998 GNEQ9Y223 722 aaKnown RBP21.62■■□□□ 1.05
CDH11-206ENST00000562998 SYNRGQ9UMZ2 1314 aa21.61■■□□□ 1.05
CDH11-206ENST00000562998 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.61■■□□□ 1.05
CDH11-206ENST00000562998 EIF5BO60841 1220 aaKnown RBP21.61■■□□□ 1.05
CDH11-206ENST00000562998 PGK1P00558 417 aa21.61■■□□□ 1.05
CDH11-206ENST00000562998 CFBP00751 764 aa21.61■■□□□ 1.05
CDH11-206ENST00000562998 C8orf34Q49A92 452 aa21.61■■□□□ 1.05
CDH11-206ENST00000562998 GJC2Q5T442 439 aaPredicted RBP21.61■■□□□ 1.05
CDH11-206ENST00000562998 CCSAPQ6IQ19 270 aaPredicted RBP21.61■■□□□ 1.05
CDH11-206ENST00000562998 FBXO16Q8IX29 292 aaPredicted RBP21.61■■□□□ 1.05
CDH11-206ENST00000562998 KLHDC9Q8NEP7 349 aa21.61■■□□□ 1.05
CDH11-206ENST00000562998 NSUN6Q8TEA1 469 aaKnown RBP21.61■■□□□ 1.05
CDH11-206ENST00000562998 CYP46A1Q9Y6A2 500 aa21.61■■□□□ 1.05
CDH11-206ENST00000562998 GOLGA8AA7E2F4 631 aa21.6■■□□□ 1.05
CDH11-206ENST00000562998 GOLGA8BA8MQT2 603 aa21.6■■□□□ 1.05
CDH11-206ENST00000562998 CTAGE5O15320 804 aa21.6■■□□□ 1.05
CDH11-206ENST00000562998 CST5P28325 142 aaPredicted RBP21.6■■□□□ 1.05
CDH11-206ENST00000562998 ADCYAP1R1P41586 468 aa21.6■■□□□ 1.05
CDH11-206ENST00000562998 IQSEC1Q6DN90 963 aa21.6■■□□□ 1.05
CDH11-206ENST00000562998 PIBF1Q8WXW3 757 aa21.6■■□□□ 1.05
CDH11-206ENST00000562998 IWS1Q96ST2 819 aa21.6■■□□□ 1.05
CDH11-206ENST00000562998 SEC63Q9UGP8 760 aaKnown RBP21.6■■□□□ 1.05
CDH11-206ENST00000562998 GJA9P57773 515 aa21.59■■□□□ 1.05
CDH11-206ENST00000562998 FGD1P98174 961 aa21.59■■□□□ 1.05
CDH11-206ENST00000562998 TNFAIP2Q03169 654 aa21.59■■□□□ 1.05
CDH11-206ENST00000562998 EEPD1Q7L9B9 569 aa21.59■■□□□ 1.05
CDH11-206ENST00000562998 CCDC82Q8N4S0 544 aa21.59■■□□□ 1.05
CDH11-206ENST00000562998 RMDN3Q96TC7 470 aa21.59■■□□□ 1.05
CDH11-206ENST00000562998 UPF3BQ9BZI7 483 aaKnown RBP21.59■■□□□ 1.05
CDH11-206ENST00000562998 PXMP2Q9NR77 195 aa21.59■■□□□ 1.05
CDH11-206ENST00000562998 PHF24Q9UPV7 400 aa21.59■■□□□ 1.05
CDH11-206ENST00000562998 hCG_1642624A0A1W2PR95 340 aa21.58■■□□□ 1.05
CDH11-206ENST00000562998 B4DLN1 442 aa21.58■■□□□ 1.05
CDH11-206ENST00000562998 SMPD1P17405 629 aa21.58■■□□□ 1.05
CDH11-206ENST00000562998 PDIA3P30101 505 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms