RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 NR1I2O75469 434 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 TECP42680 631 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 KIF22Q14807 665 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 FKBP1CQ5VVH2 108 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 MYOCDQ8IZQ8 938 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 NEK9Q8TD19 979 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 SLC10A4Q96EP9 437 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 WRNIP1Q96S55 665 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 MMRN2Q9H8L6 949 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 ZBTB21Q9ULJ3 1066 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 PPP2R3BQ9Y5P8 575 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 PSMD14O00487 310 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 FANCCQ00597 558 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 MAP2K1Q02750 393 aaPredicted RBP8.38□□□□□ -1.07
TCF4-216ENST00000562680 ZNF543Q08ER8 600 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 NR5A1Q13285 461 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 TRMT1LQ7Z2T5 733 aaKnown RBP8.38□□□□□ -1.07
TCF4-216ENST00000562680 GPBP1Q86WP2 473 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 C2orf69Q8N8R5 385 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 FAM20AQ96MK3 541 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 LRRC4BQ9NT99 713 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 TMEM51Q9NW97 253 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 PKD2L1Q9P0L9 805 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 TESPA1A2RU30 521 aaPredicted RBP8.38□□□□□ -1.07
TCF4-216ENST00000562680 PSDA5PKW4 1024 aaPredicted RBP8.38□□□□□ -1.07
TCF4-216ENST00000562680 CCDC175P0C221 793 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 CCND2P30279 289 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 TBC1D8BQ0IIM8 1120 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 MIGA2Q7L4E1 593 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 GTF3C2Q8WUA4 911 aaPredicted RBP8.38□□□□□ -1.07
TCF4-216ENST00000562680 NOC4LQ9BVI4 516 aaKnown RBP8.38□□□□□ -1.07
TCF4-216ENST00000562680 PLVAPQ9BX97 442 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 RBSNQ9H1K0 784 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 NRBP2Q9NSY0 501 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 LRP6O75581 1613 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 ESYT2A0FGR8 921 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 POTEB2H3BUK9 544 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 CASQ1P31415 396 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 SLC16A2P36021 539 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 TUBB4BP68371 445 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 SNW1Q13573 536 aaKnown RBP8.38□□□□□ -1.07
TCF4-216ENST00000562680 RASA3Q14644 834 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 TKFCQ3LXA3 575 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 SPECC1Q5M775 1068 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 NCAPG2Q86XI2 1143 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 CCDC51Q96ER9 411 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 RTFDC1Q9BY42 306 aaPredicted RBP8.38□□□□□ -1.07
TCF4-216ENST00000562680 FAM107BQ9H098 131 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 CSRNP2Q9H175 543 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 OGFRQ9NZT2 677 aa8.38□□□□□ -1.07
TCF4-216ENST00000562680 NDUFA8P51970 172 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 FAM26FQ5R3K3 315 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 C3orf67Q6ZVT6 689 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 UBXN4Q92575 508 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 LARP4BQ92615 738 aaKnown RBP8.37□□□□□ -1.07
TCF4-216ENST00000562680 COA7Q96BR5 231 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 NACC1Q96RE7 527 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 MLXIPQ9HAP2 919 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 METTL14Q9HCE5 456 aaKnown RBP8.37□□□□□ -1.07
TCF4-216ENST00000562680 RSPH14Q9UHP6 348 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 PAXBP1Q9Y5B6 917 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 KCPQ6ZWJ8 1503 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 LOC102724159A0A0B4J2E5 919 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 TCRBV5S4A2TA0A5A2 114 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 CDC27P30260 824 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 ANTXR2P58335 489 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 PWP2Q15269 919 aaKnown RBP8.37□□□□□ -1.07
TCF4-216ENST00000562680 FAM83AQ86UY5 434 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 TPH2Q8IWU9 490 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 MYCT1Q8N699 235 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 ZNF513Q8N8E2 541 aaPredicted RBP8.37□□□□□ -1.07
TCF4-216ENST00000562680 MSANTD4Q8NCY6 345 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 NELFBQ8WX92 580 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.37□□□□□ -1.07
TCF4-216ENST00000562680 TTC12Q9H892 705 aaPredicted RBP8.37□□□□□ -1.07
TCF4-216ENST00000562680 AKR1B15C9JRZ8 316 aaPredicted RBP8.37□□□□□ -1.07
TCF4-216ENST00000562680 IKBKBO14920 756 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 SP4Q02446 784 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 PPP2R5AQ15172 486 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 DYDC1Q8WWB3 177 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 USP54Q70EL1 1684 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 ANKRD62A6NC57 917 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 CCDC169A6NNP5 214 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 ZNF500O60304 480 aaPredicted RBP8.37□□□□□ -1.07
TCF4-216ENST00000562680 USP11P51784 963 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 ZNF75DP51815 510 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 EVCP57679 992 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 PSMD2Q13200 908 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 ZNF827Q17R98 1081 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 FASTKD5Q7L8L6 764 aaKnown RBP8.37□□□□□ -1.07
TCF4-216ENST00000562680 GPT2Q8TD30 523 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 LMBR1Q8WVP7 490 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 DHTKD1Q96HY7 919 aaPredicted RBP8.37□□□□□ -1.07
TCF4-216ENST00000562680 CCDC42Q96M95 316 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 AGXT2Q9BYV1 514 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 MYOZ2Q9NPC6 264 aa8.37□□□□□ -1.07
TCF4-216ENST00000562680 ALCAMQ13740 583 aa8.36□□□□□ -1.07
TCF4-216ENST00000562680 FNBP1Q96RU3 617 aa8.36□□□□□ -1.07
TCF4-216ENST00000562680 ZNF577Q9BSK1 485 aa8.36□□□□□ -1.07
TCF4-216ENST00000562680 SYNPO2Q9UMS6 1093 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms