RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 YARSP54577 528 aaKnown RBP7.6□□□□□ -1.19
UBR1-203ENST00000562173 LRP8Q14114 963 aa7.6□□□□□ -1.19
UBR1-203ENST00000562173 SLC6A19Q695T7 634 aa7.6□□□□□ -1.19
UBR1-203ENST00000562173 ZAR1Q86SH2 424 aa7.6□□□□□ -1.19
UBR1-203ENST00000562173 SEC16BQ96JE7 1060 aa7.6□□□□□ -1.19
UBR1-203ENST00000562173 TINF2Q9BSI4 451 aa7.6□□□□□ -1.19
UBR1-203ENST00000562173 BRMS1Q9HCU9 246 aa7.6□□□□□ -1.19
UBR1-203ENST00000562173 ATG3Q9NT62 314 aa7.6□□□□□ -1.19
UBR1-203ENST00000562173 STRIP2Q9ULQ0 834 aa7.6□□□□□ -1.19
UBR1-203ENST00000562173 ANKRD26Q9UPS8 1709 aa7.6□□□□□ -1.19
UBR1-203ENST00000562173 CASP8AP2Q9UKL3 1982 aa7.59□□□□□ -1.19
UBR1-203ENST00000562173 MEIS3P2A8K0S8 358 aa7.59□□□□□ -1.19
UBR1-203ENST00000562173 PLCG1P19174 1290 aa7.59□□□□□ -1.19
UBR1-203ENST00000562173 NFKBIBQ15653 356 aa7.59□□□□□ -1.19
UBR1-203ENST00000562173 LRRFIP1Q32MZ4 808 aaKnown RBP7.59□□□□□ -1.19
UBR1-203ENST00000562173 ARMCX6Q7L4S7 300 aa7.59□□□□□ -1.19
UBR1-203ENST00000562173 MCATQ8IVS2 390 aaKnown RBP7.59□□□□□ -1.19
UBR1-203ENST00000562173 SLFN12Q8IYM2 578 aa7.59□□□□□ -1.19
UBR1-203ENST00000562173 MFSD2AQ8NA29 543 aa7.59□□□□□ -1.19
UBR1-203ENST00000562173 TMEM87BQ96K49 555 aa7.59□□□□□ -1.19
UBR1-203ENST00000562173 FOXQ1Q9C009 403 aa7.59□□□□□ -1.19
UBR1-203ENST00000562173 FBRSQ9HAH7 460 aa7.59□□□□□ -1.19
UBR1-203ENST00000562173 CAPN10Q9HC96 672 aa7.59□□□□□ -1.19
UBR1-203ENST00000562173 C1GALT1Q9NS00 363 aa7.59□□□□□ -1.19
UBR1-203ENST00000562173 GMIPQ9P107 970 aa7.59□□□□□ -1.19
UBR1-203ENST00000562173 REV1Q9UBZ9 1251 aa7.59□□□□□ -1.19
UBR1-203ENST00000562173 ZNRF3Q9ULT6 936 aa7.59□□□□□ -1.19
UBR1-203ENST00000562173 FER1L6Q2WGJ9 1857 aa7.59□□□□□ -1.19
UBR1-203ENST00000562173 SLX4Q8IY92 1834 aa7.59□□□□□ -1.19
UBR1-203ENST00000562173 CST3P01034 146 aaPredicted RBP7.58□□□□□ -1.2
UBR1-203ENST00000562173 SLBPQ14493 270 aaKnown RBP eCLIP7.58□□□□□ -1.2
UBR1-203ENST00000562173 SLC43A3Q8NBI5 491 aa7.58□□□□□ -1.2
UBR1-203ENST00000562173 GATA6Q92908 595 aa7.58□□□□□ -1.2
UBR1-203ENST00000562173 ACSF2Q96CM8 615 aaPredicted RBP7.58□□□□□ -1.2
UBR1-203ENST00000562173 PSMG3-AS1Q96PY0 264 aa7.58□□□□□ -1.2
UBR1-203ENST00000562173 TJP2Q9UDY2 1190 aa7.58□□□□□ -1.2
UBR1-203ENST00000562173 PCDHB14Q9Y5E9 798 aa7.58□□□□□ -1.2
UBR1-203ENST00000562173 NRXN2Q9P2S2 1712 aa7.58□□□□□ -1.2
UBR1-203ENST00000562173 DYNC1LI2O43237 492 aaPredicted RBP7.57□□□□□ -1.2
UBR1-203ENST00000562173 HYAL3O43820 417 aaPredicted RBP7.57□□□□□ -1.2
UBR1-203ENST00000562173 ZNF746Q6NUN9 644 aaPredicted RBP7.57□□□□□ -1.2
UBR1-203ENST00000562173 UBE3DQ7Z6J8 389 aa7.57□□□□□ -1.2
UBR1-203ENST00000562173 TBC1D32Q96NH3 1257 aa7.57□□□□□ -1.2
UBR1-203ENST00000562173 RNF112Q9ULX5 631 aa7.57□□□□□ -1.2
UBR1-203ENST00000562173 CORINQ9Y5Q5 1042 aa7.57□□□□□ -1.2
UBR1-203ENST00000562173 KDM6AO15550 1401 aaPredicted RBP7.57□□□□□ -1.2
UBR1-203ENST00000562173 FYB1O15117 783 aa7.56□□□□□ -1.2
UBR1-203ENST00000562173 TNRC18O15417 2968 aaPredicted RBP7.56□□□□□ -1.2
UBR1-203ENST00000562173 NKG7Q16617 165 aa7.56□□□□□ -1.2
UBR1-203ENST00000562173 CYP27C1Q4G0S4 372 aa7.56□□□□□ -1.2
UBR1-203ENST00000562173 PRAMEF13Q5VWM6 474 aa7.56□□□□□ -1.2
UBR1-203ENST00000562173 VPS37DQ86XT2 251 aa7.56□□□□□ -1.2
UBR1-203ENST00000562173 C16orf71Q8IYS4 520 aaPredicted RBP7.56□□□□□ -1.2
UBR1-203ENST00000562173 CYB5D2Q8WUJ1 264 aa7.56□□□□□ -1.2
UBR1-203ENST00000562173 RAPGEF4Q8WZA2 1011 aa7.56□□□□□ -1.2
UBR1-203ENST00000562173 COX4I2Q96KJ9 171 aa7.56□□□□□ -1.2
UBR1-203ENST00000562173 TESK2Q96S53 571 aa7.56□□□□□ -1.2
UBR1-203ENST00000562173 PRDM10Q9NQV6 1147 aa7.56□□□□□ -1.2
UBR1-203ENST00000562173 PCDH11XQ9BZA7 1347 aa7.55□□□□□ -1.2
UBR1-203ENST00000562173 PCDH11YQ9BZA8 1340 aa7.55□□□□□ -1.2
UBR1-203ENST00000562173 MCM4P33991 863 aa7.55□□□□□ -1.2
UBR1-203ENST00000562173 CDK5R2Q13319 367 aa7.55□□□□□ -1.2
UBR1-203ENST00000562173 OGFOD3Q6PK18 319 aa7.55□□□□□ -1.2
UBR1-203ENST00000562173 HDGFL2Q7Z4V5 671 aaPredicted RBP7.55□□□□□ -1.2
UBR1-203ENST00000562173 TAB3Q8N5C8 712 aaPredicted RBP7.55□□□□□ -1.2
UBR1-203ENST00000562173 RBBP8NLQ8NC74 664 aaPredicted RBP7.55□□□□□ -1.2
UBR1-203ENST00000562173 FAM13CQ8NE31 585 aa7.55□□□□□ -1.2
UBR1-203ENST00000562173 OR6P1Q8NGX9 317 aa7.55□□□□□ -1.2
UBR1-203ENST00000562173 TMEM40Q8WWA1 233 aa7.55□□□□□ -1.2
UBR1-203ENST00000562173 COG3Q96JB2 828 aa7.55□□□□□ -1.2
UBR1-203ENST00000562173 MFSD14AQ96MC6 490 aa7.55□□□□□ -1.2
UBR1-203ENST00000562173 FERD3LQ96RJ6 166 aa7.55□□□□□ -1.2
UBR1-203ENST00000562173 GINM1Q9NU53 330 aa7.55□□□□□ -1.2
UBR1-203ENST00000562173 SCN11AQ9UI33 1791 aa7.55□□□□□ -1.2
UBR1-203ENST00000562173 LTBP1Q14766 1721 aa7.55□□□□□ -1.2
UBR1-203ENST00000562173 NCAPD2Q15021 1401 aa7.54□□□□□ -1.2
UBR1-203ENST00000562173 PPM1GO15355 546 aaPredicted RBP7.54□□□□□ -1.2
UBR1-203ENST00000562173 PHKG2P15735 406 aa7.54□□□□□ -1.2
UBR1-203ENST00000562173 ATF4P18848 351 aaPredicted RBP7.54□□□□□ -1.2
UBR1-203ENST00000562173 CCNFP41002 786 aa7.54□□□□□ -1.2
UBR1-203ENST00000562173 TNNI2P48788 182 aa7.54□□□□□ -1.2
UBR1-203ENST00000562173 LBX1P52954 281 aa7.54□□□□□ -1.2
UBR1-203ENST00000562173 FSTL1Q12841 308 aa7.54□□□□□ -1.2
UBR1-203ENST00000562173 CDCP2Q5VXM1 449 aa7.54□□□□□ -1.2
UBR1-203ENST00000562173 OLFM4Q6UX06 510 aa7.54□□□□□ -1.2
UBR1-203ENST00000562173 GK5Q6ZS86 529 aa7.54□□□□□ -1.2
UBR1-203ENST00000562173 ZDHHC13Q8IUH4 622 aa7.54□□□□□ -1.2
UBR1-203ENST00000562173 SHKBP1Q8TBC3 707 aa7.54□□□□□ -1.2
UBR1-203ENST00000562173 GMLQ99445 158 aa7.54□□□□□ -1.2
UBR1-203ENST00000562173 DUSP23Q9BVJ7 150 aa7.54□□□□□ -1.2
UBR1-203ENST00000562173 MAPK8IP1Q9UQF2 711 aa7.54□□□□□ -1.2
UBR1-203ENST00000562173 EFR3BQ9Y2G0 817 aa7.54□□□□□ -1.2
UBR1-203ENST00000562173 POLRMTO00411 1230 aaKnown RBP7.53□□□□□ -1.2
UBR1-203ENST00000562173 F13BP05160 661 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 ADMP35318 185 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 ETV3P41162 512 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 TGFB2P61812 414 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 TMF1P82094 1093 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 CLCQ05315 142 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 DUSP27Q5VZP5 1158 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms