RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 KCNV1Q6PIU1 500 aa20.74■□□□□ 0.91
BBS4-204ENST00000562084 CD302Q8IX05 232 aa20.74■□□□□ 0.91
BBS4-204ENST00000562084 CCDC42Q96M95 316 aa20.74■□□□□ 0.91
BBS4-204ENST00000562084 TUBGCP2Q9BSJ2 902 aa20.74■□□□□ 0.91
BBS4-204ENST00000562084 SH2D4AQ9H788 454 aa20.74■□□□□ 0.91
BBS4-204ENST00000562084 DLEC1Q9Y238 1755 aa20.74■□□□□ 0.91
BBS4-204ENST00000562084 RCCD1A6NED2 376 aa20.73■□□□□ 0.91
BBS4-204ENST00000562084 COBLO75128 1261 aa20.73■□□□□ 0.91
BBS4-204ENST00000562084 LCA5LO95447 670 aa20.73■□□□□ 0.91
BBS4-204ENST00000562084 CRKLP46109 303 aaKnown RBP20.73■□□□□ 0.91
BBS4-204ENST00000562084 DRP2Q13474 957 aa20.73■□□□□ 0.91
BBS4-204ENST00000562084 TTI2Q6NXR4 508 aa20.73■□□□□ 0.91
BBS4-204ENST00000562084 GIGYF2Q6Y7W6 1299 aaKnown RBP20.73■□□□□ 0.91
BBS4-204ENST00000562084 MREGQ8N565 214 aa20.73■□□□□ 0.91
BBS4-204ENST00000562084 GIMAP8Q8ND71 665 aaPredicted RBP20.73■□□□□ 0.91
BBS4-204ENST00000562084 CCDC47Q96A33 483 aaKnown RBP20.73■□□□□ 0.91
BBS4-204ENST00000562084 ZSCAN10Q96SZ4 725 aaPredicted RBP20.73■□□□□ 0.91
BBS4-204ENST00000562084 LRRC1Q9BTT6 524 aa20.73■□□□□ 0.91
BBS4-204ENST00000562084 CUEDC2Q9H467 287 aa20.73■□□□□ 0.91
BBS4-204ENST00000562084 V9GY48 417 aaPredicted RBP20.73■□□□□ 0.91
BBS4-204ENST00000562084 PES1O00541 588 aaKnown RBP20.73■□□□□ 0.91
BBS4-204ENST00000562084 CHRM1P11229 460 aaPredicted RBP20.73■□□□□ 0.91
BBS4-204ENST00000562084 FNTAP49354 379 aa20.73■□□□□ 0.91
BBS4-204ENST00000562084 CCDC181Q5TID7 509 aa20.73■□□□□ 0.91
BBS4-204ENST00000562084 INTS5Q6P9B9 1019 aaKnown RBP20.73■□□□□ 0.91
BBS4-204ENST00000562084 TMTC3Q6ZXV5 915 aa20.73■□□□□ 0.91
BBS4-204ENST00000562084 IFT20Q8IY31 132 aa20.73■□□□□ 0.91
BBS4-204ENST00000562084 LCORLQ8N3X6 602 aa20.73■□□□□ 0.91
BBS4-204ENST00000562084 CXorf56Q9H5V9 222 aa20.73■□□□□ 0.91
BBS4-204ENST00000562084 DISC1Q9NRI5 854 aa20.73■□□□□ 0.91
BBS4-204ENST00000562084 WNT7AO00755 349 aa20.72■□□□□ 0.91
BBS4-204ENST00000562084 TBC1D8BQ0IIM8 1120 aa20.72■□□□□ 0.91
BBS4-204ENST00000562084 TTMPQ5BVD1 217 aa20.72■□□□□ 0.91
BBS4-204ENST00000562084 ZSCAN29Q8IWY8 852 aaPredicted RBP20.72■□□□□ 0.91
BBS4-204ENST00000562084 OSBPL9Q96SU4 736 aa20.72■□□□□ 0.91
BBS4-204ENST00000562084 EPN3Q9H201 632 aa20.72■□□□□ 0.91
BBS4-204ENST00000562084 MACROD2A1Z1Q3 448 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 KIF1CO43896 1103 aaKnown RBP20.71■□□□□ 0.91
BBS4-204ENST00000562084 CALML3P27482 149 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 CCDC96Q2M329 555 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 FKBP15Q5T1M5 1219 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 IFIT1BQ5T764 474 aaKnown RBP20.71■□□□□ 0.91
BBS4-204ENST00000562084 FBXW10Q5XX13 1052 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 C3orf20Q8ND61 904 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.71■□□□□ 0.91
BBS4-204ENST00000562084 CCDC87Q9NVE4 849 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 DMGDHQ9UI17 866 aaKnown RBP20.71■□□□□ 0.91
BBS4-204ENST00000562084 CAPN7Q9Y6W3 813 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 CNTNAP4Q9C0A0 1308 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 TRIM49BA6NDI0 452 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 B4DLN1 442 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 PRKAB2O43741 272 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 PDE8AO60658 829 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 RASGRF1Q13972 1273 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 SKIDA1Q1XH10 827 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 RC3H1Q5TC82 1133 aaKnown RBP20.71■□□□□ 0.91
BBS4-204ENST00000562084 HAUS3Q68CZ6 603 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 C8orf74Q6P047 294 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 NLRP10Q86W26 655 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 ENAHQ8N8S7 591 aaPredicted RBP20.71■□□□□ 0.91
BBS4-204ENST00000562084 RRP36Q96EU6 259 aaKnown RBP20.71■□□□□ 0.91
BBS4-204ENST00000562084 IFIH1Q9BYX4 1025 aaKnown RBP20.71■□□□□ 0.91
BBS4-204ENST00000562084 AGPAT5Q9NUQ2 364 aa20.71■□□□□ 0.91
BBS4-204ENST00000562084 ANKRD36CQ5JPF3 1778 aa20.7■□□□□ 0.9
BBS4-204ENST00000562084 H0YHG0 523 aa20.7■□□□□ 0.9
BBS4-204ENST00000562084 PJA2O43164 708 aa20.7■□□□□ 0.9
BBS4-204ENST00000562084 PRDM1O75626 825 aa20.7■□□□□ 0.9
BBS4-204ENST00000562084 CCNE1P24864 410 aa20.7■□□□□ 0.9
BBS4-204ENST00000562084 PAK2Q13177 524 aa20.7■□□□□ 0.9
BBS4-204ENST00000562084 IL17AQ16552 155 aa20.7■□□□□ 0.9
BBS4-204ENST00000562084 IQCA1Q86XH1 822 aa20.7■□□□□ 0.9
BBS4-204ENST00000562084 CSGALNACT2Q8N6G5 542 aa20.7■□□□□ 0.9
BBS4-204ENST00000562084 LRWD1Q9UFC0 647 aa20.7■□□□□ 0.9
BBS4-204ENST00000562084 TFR2Q9UP52 801 aa20.7■□□□□ 0.9
BBS4-204ENST00000562084 PLAGL2Q9UPG8 496 aa20.7■□□□□ 0.9
BBS4-204ENST00000562084 ZBTB1Q9Y2K1 713 aa20.7■□□□□ 0.9
BBS4-204ENST00000562084 PCDHA13Q9Y5I0 950 aa20.7■□□□□ 0.9
BBS4-204ENST00000562084 CNTNAP5Q8WYK1 1306 aa20.7■□□□□ 0.9
BBS4-204ENST00000562084 NAP1L1P55209 391 aaKnown RBP20.69■□□□□ 0.9
BBS4-204ENST00000562084 TROAPQ12815 778 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 COBLL1Q53SF7 1204 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 ARHGAP27Q6ZUM4 889 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 RNF10Q8N5U6 811 aaKnown RBP20.69■□□□□ 0.9
BBS4-204ENST00000562084 AKT1S1Q96B36 256 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 ARL8AQ96BM9 186 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 DUOX1Q9NRD9 1551 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 UBR3Q6ZT12 1888 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 RASSF10A6NK89 507 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 SOCS7O14512 581 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 IRS4O14654 1257 aaPredicted RBP20.69■□□□□ 0.9
BBS4-204ENST00000562084 KLRC4O43908 158 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 PLEKHA8P1O95397 391 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 CCDC172P0C7W6 258 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 HOXA7P31268 230 aaPredicted RBP20.69■□□□□ 0.9
BBS4-204ENST00000562084 NLRP5P59047 1200 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 CFAP58Q5T655 872 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 IQCKQ8N0W5 287 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 C4orf32Q8N8J7 132 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 GPATCH11Q8N954 259 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 TSEN2Q8NCE0 465 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms