RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 PNMA1Q8ND90 353 aa29.66■■■□□ 2.34
NME3-202ENST00000561637 NUP133Q8WUM0 1156 aa29.66■■■□□ 2.34
NME3-202ENST00000561637 CLEC4DQ8WXI8 215 aa29.66■■■□□ 2.34
NME3-202ENST00000561637 ZSCAN10Q96SZ4 725 aaPredicted RBP29.66■■■□□ 2.34
NME3-202ENST00000561637 ABHD16BQ9H3Z7 469 aa29.66■■■□□ 2.34
NME3-202ENST00000561637 BAATQ14032 418 aaPredicted RBP29.65■■■□□ 2.34
NME3-202ENST00000561637 SLC30A10Q6XR72 485 aa29.65■■■□□ 2.34
NME3-202ENST00000561637 CYB5R4Q7L1T6 521 aa29.65■■■□□ 2.34
NME3-202ENST00000561637 PRDM12Q9H4Q4 367 aa29.65■■■□□ 2.34
NME3-202ENST00000561637 CTNNA3Q9UI47 895 aa29.65■■■□□ 2.34
NME3-202ENST00000561637 TNKSO95271 1327 aa29.65■■■□□ 2.34
NME3-202ENST00000561637 RAD50Q92878 1312 aa29.65■■■□□ 2.34
NME3-202ENST00000561637 DUSP11O75319 330 aaKnown RBP29.64■■■□□ 2.34
NME3-202ENST00000561637 EEPD1Q7L9B9 569 aa29.64■■■□□ 2.34
NME3-202ENST00000561637 IQCA1Q86XH1 822 aa29.64■■■□□ 2.34
NME3-202ENST00000561637 ANKS1AQ92625 1134 aa29.64■■■□□ 2.34
NME3-202ENST00000561637 PDGFCQ9NRA1 345 aa29.64■■■□□ 2.34
NME3-202ENST00000561637 REV3LO60673 3130 aa29.64■■■□□ 2.33
NME3-202ENST00000561637 MOXD2PA6NHM9 499 aa29.63■■■□□ 2.33
NME3-202ENST00000561637 CDK7P50613 346 aa29.63■■■□□ 2.33
NME3-202ENST00000561637 RASIP1Q5U651 963 aa29.63■■■□□ 2.33
NME3-202ENST00000561637 FBXO16Q8IX29 292 aaPredicted RBP29.63■■■□□ 2.33
NME3-202ENST00000561637 GAS2L1Q99501 681 aaPredicted RBP29.63■■■□□ 2.33
NME3-202ENST00000561637 KAT14Q9H8E8 782 aa29.63■■■□□ 2.33
NME3-202ENST00000561637 CTAGE5O15320 804 aa29.62■■■□□ 2.33
NME3-202ENST00000561637 ACRP10323 421 aa29.62■■■□□ 2.33
NME3-202ENST00000561637 CHD7Q9P2D1 2997 aa29.61■■■□□ 2.33
NME3-202ENST00000561637 CYP21A2P08686 494 aa29.61■■■□□ 2.33
NME3-202ENST00000561637 C6orf222P0C671 652 aaPredicted RBP29.61■■■□□ 2.33
NME3-202ENST00000561637 CSF2RAP15509 400 aa29.61■■■□□ 2.33
NME3-202ENST00000561637 PPIGQ13427 754 aaKnown RBP eCLIP29.61■■■□□ 2.331e-15■□□□□ 10.6
NME3-202ENST00000561637 ADGRE1Q14246 886 aa29.61■■■□□ 2.33
NME3-202ENST00000561637 ATXN2LQ8WWM7 1075 aaKnown RBP29.61■■■□□ 2.33
NME3-202ENST00000561637 KRT23Q9C075 422 aa29.61■■■□□ 2.33
NME3-202ENST00000561637 UPF3AQ9H1J1 476 aaKnown RBP29.61■■■□□ 2.33
NME3-202ENST00000561637 PTPDC1A2A3K4 754 aa29.6■■■□□ 2.33
NME3-202ENST00000561637 SGSM2O43147 1006 aa29.6■■■□□ 2.33
NME3-202ENST00000561637 BEX3Q00994 111 aa29.6■■■□□ 2.33
NME3-202ENST00000561637 USH1GQ495M9 461 aa29.6■■■□□ 2.33
NME3-202ENST00000561637 ASB2Q96Q27 587 aa29.6■■■□□ 2.33
NME3-202ENST00000561637 TCF20Q9UGU0 1960 aaKnown RBP29.6■■■□□ 2.33
NME3-202ENST00000561637 NCOR1O75376 2440 aa29.59■■■□□ 2.33
NME3-202ENST00000561637 ASB14A6NK59 587 aa29.59■■■□□ 2.33
NME3-202ENST00000561637 ASGR1P07306 291 aa29.59■■■□□ 2.33
NME3-202ENST00000561637 CALML3P27482 149 aa29.59■■■□□ 2.33
NME3-202ENST00000561637 GJA9P57773 515 aa29.59■■■□□ 2.33
NME3-202ENST00000561637 SEC23AQ15436 765 aa29.59■■■□□ 2.33
NME3-202ENST00000561637 CCDC85BQ15834 202 aaPredicted RBP29.59■■■□□ 2.33
NME3-202ENST00000561637 GPATCH4Q5T3I0 446 aaKnown RBP29.59■■■□□ 2.33
NME3-202ENST00000561637 TAPT1Q6NXT6 567 aa29.59■■■□□ 2.33
NME3-202ENST00000561637 STOX1Q6ZVD7 989 aa29.59■■■□□ 2.33
NME3-202ENST00000561637 ZNF365Q70YC5 407 aa29.59■■■□□ 2.33
NME3-202ENST00000561637 GLT1D1Q96MS3 346 aa29.59■■■□□ 2.33
NME3-202ENST00000561637 PPP1R12CQ9BZL4 782 aa29.59■■■□□ 2.33
NME3-202ENST00000561637 SENP2Q9HC62 589 aa29.59■■■□□ 2.33
NME3-202ENST00000561637 THEGQ9P2T0 379 aa29.59■■■□□ 2.33
NME3-202ENST00000561637 ELP1O95163 1332 aa29.59■■■□□ 2.33
NME3-202ENST00000561637 SMPD1P17405 629 aa29.58■■■□□ 2.33
NME3-202ENST00000561637 CST5P28325 142 aaPredicted RBP29.58■■■□□ 2.33
NME3-202ENST00000561637 ALDH5A1P51649 535 aaPredicted RBP29.58■■■□□ 2.33
NME3-202ENST00000561637 TNFAIP2Q03169 654 aa29.58■■■□□ 2.33
NME3-202ENST00000561637 CDC37Q16543 378 aaPredicted RBP29.58■■■□□ 2.33
NME3-202ENST00000561637 CCDC178Q5BJE1 867 aa29.58■■■□□ 2.33
NME3-202ENST00000561637 UBAC1Q9BSL1 405 aa29.58■■■□□ 2.33
NME3-202ENST00000561637 CNNM2Q9H8M5 875 aa29.58■■■□□ 2.33
NME3-202ENST00000561637 MROH7Q68CQ1 1323 aa29.57■■■□□ 2.32
NME3-202ENST00000561637 WDR19Q8NEZ3 1342 aa29.57■■■□□ 2.32
NME3-202ENST00000561637 NOL8Q76FK4 1167 aaKnown RBP29.57■■■□□ 2.32
NME3-202ENST00000561637 ADGRF4Q8IZF3 695 aa29.57■■■□□ 2.32
NME3-202ENST00000561637 STAG2Q8N3U4 1231 aa29.57■■■□□ 2.32
NME3-202ENST00000561637 ADAMTS19Q8TE59 1207 aa29.57■■■□□ 2.32
NME3-202ENST00000561637 RUFY2Q8WXA3 655 aa29.57■■■□□ 2.32
NME3-202ENST00000561637 TBC1D5Q92609 795 aa29.57■■■□□ 2.32
NME3-202ENST00000561637 VTI1AQ96AJ9 217 aa29.57■■■□□ 2.32
NME3-202ENST00000561637 GNEQ9Y223 722 aaKnown RBP29.57■■■□□ 2.32
NME3-202ENST00000561637 ARVCFO00192 962 aa29.56■■■□□ 2.32
NME3-202ENST00000561637 RPS6P62753 249 aaKnown RBP29.56■■■□□ 2.32
NME3-202ENST00000561637 GNASQ5JWF2 1037 aa29.56■■■□□ 2.32
NME3-202ENST00000561637 MORC4Q8TE76 937 aa29.56■■■□□ 2.32
NME3-202ENST00000561637 IFIT1BQ5T764 474 aaKnown RBP29.55■■■□□ 2.32
NME3-202ENST00000561637 RNF207Q6ZRF8 634 aa29.55■■■□□ 2.32
NME3-202ENST00000561637 CHST3Q7LGC8 479 aa29.55■■■□□ 2.32
NME3-202ENST00000561637 FAM126BQ8IXS8 530 aa29.55■■■□□ 2.32
NME3-202ENST00000561637 TMEM199Q8N511 208 aa29.55■■■□□ 2.32
NME3-202ENST00000561637 VAT1LQ9HCJ6 419 aa29.55■■■□□ 2.32
NME3-202ENST00000561637 CXXC1Q9P0U4 656 aaPredicted RBP29.55■■■□□ 2.32
NME3-202ENST00000561637 CYP2C18P33260 490 aa29.54■■■□□ 2.32
NME3-202ENST00000561637 NT5C2P49902 561 aa29.54■■■□□ 2.32
NME3-202ENST00000561637 SLC35G1Q2M3R5 365 aa29.54■■■□□ 2.32
NME3-202ENST00000561637 QRICH1Q2TAL8 776 aa29.54■■■□□ 2.32
NME3-202ENST00000561637 ASPRV1Q53RT3 343 aa29.54■■■□□ 2.32
NME3-202ENST00000561637 TLK2Q86UE8 772 aa29.54■■■□□ 2.32
NME3-202ENST00000561637 PCSK9Q8NBP7 692 aaKnown RBP29.54■■■□□ 2.32
NME3-202ENST00000561637 JMJD4Q9H9V9 463 aa29.54■■■□□ 2.32
NME3-202ENST00000561637 U3KPZ7 1027 aaPredicted RBP29.54■■■□□ 2.32
NME3-202ENST00000561637 A0A0U1RQG5 324 aaPredicted RBP29.53■■■□□ 2.32
NME3-202ENST00000561637 PARP1P09874 1014 aaKnown RBP29.53■■■□□ 2.32
NME3-202ENST00000561637 IGFBP4P22692 258 aa29.53■■■□□ 2.32
NME3-202ENST00000561637 COL9A3Q14050 684 aaPredicted RBP29.53■■■□□ 2.32
NME3-202ENST00000561637 PSRC1Q6PGN9 363 aaPredicted RBP29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms