RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 NOP56O00567 594 aaKnown RBP5.36□□□□□ -1.55
HERC1-215ENST00000561436 TBX1O43435 398 aa5.36□□□□□ -1.55
HERC1-215ENST00000561436 FARP2O94887 1054 aaPredicted RBP5.36□□□□□ -1.55
HERC1-215ENST00000561436 HSD3B2P26439 372 aa5.36□□□□□ -1.55
HERC1-215ENST00000561436 ZC3H12BQ5HYM0 836 aaKnown RBP5.36□□□□□ -1.55
HERC1-215ENST00000561436 MRM1Q6IN84 353 aaKnown RBP5.36□□□□□ -1.55
HERC1-215ENST00000561436 POMZP3Q6PJE2 187 aa5.36□□□□□ -1.55
HERC1-215ENST00000561436 SYDE1Q6ZW31 735 aaPredicted RBP5.36□□□□□ -1.55
HERC1-215ENST00000561436 JAZF1Q86VZ6 243 aa5.36□□□□□ -1.55
HERC1-215ENST00000561436 HOMER1Q86YM7 354 aa5.36□□□□□ -1.55
HERC1-215ENST00000561436 ZNF513Q8N8E2 541 aaPredicted RBP5.36□□□□□ -1.55
HERC1-215ENST00000561436 SGSM3Q96HU1 749 aa5.36□□□□□ -1.55
HERC1-215ENST00000561436 SGPP1Q9BX95 441 aa5.36□□□□□ -1.55
HERC1-215ENST00000561436 EPB41L4BQ9H329 900 aa5.36□□□□□ -1.55
HERC1-215ENST00000561436 WHRNQ9P202 907 aa5.36□□□□□ -1.55
HERC1-215ENST00000561436 IMPACTQ9P2X3 320 aa5.36□□□□□ -1.55
HERC1-215ENST00000561436 CGGBP1Q9UFW8 167 aaPredicted RBP5.36□□□□□ -1.55
HERC1-215ENST00000561436 PFDN2Q9UHV9 154 aa5.36□□□□□ -1.55
HERC1-215ENST00000561436 YBX2Q9Y2T7 364 aaKnown RBP5.36□□□□□ -1.55
HERC1-215ENST00000561436 MRPL42Q9Y6G3 142 aaKnown RBP5.36□□□□□ -1.55
HERC1-215ENST00000561436 KDM2BQ8NHM5 1336 aa5.36□□□□□ -1.55
HERC1-215ENST00000561436 ERICH3Q5RHP9 1530 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 CDC45O75419 566 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 PRKCAP17252 672 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 TACR1P25103 407 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 CHRNEQ04844 493 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 SLC10A6Q3KNW5 377 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 C2orf27AQ580R0 203 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 LCE3BQ5TA77 95 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 SLCO6A1Q86UG4 719 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 KRTAP1-3Q8IUG1 177 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 SPPL2CQ8IUH8 684 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 KSR1Q8IVT5 923 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 ZSWIM2Q8NEG5 633 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 NUP43Q8NFH3 380 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 SH3TC2Q8TF17 1288 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 APPBP2Q92624 585 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 SLC26A8Q96RN1 970 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 PRR13Q9NZ81 148 aa5.35□□□□□ -1.55
HERC1-215ENST00000561436 MAPKBP1O60336 1514 aa5.34□□□□□ -1.55
HERC1-215ENST00000561436 MYOCOSA0A1B0GUC4 107 aa5.34□□□□□ -1.55
HERC1-215ENST00000561436 ENPP3O14638 875 aa5.34□□□□□ -1.55
HERC1-215ENST00000561436 FGF10O15520 208 aaPredicted RBP5.34□□□□□ -1.55
HERC1-215ENST00000561436 NRDCO43847 1150 aa5.34□□□□□ -1.55
HERC1-215ENST00000561436 KCNH1O95259 989 aa5.34□□□□□ -1.55
HERC1-215ENST00000561436 KRT1P04264 644 aa5.34□□□□□ -1.55
HERC1-215ENST00000561436 KIR2DL1P43626 348 aaPredicted RBP5.34□□□□□ -1.55
HERC1-215ENST00000561436 KIR2DL2P43627 348 aaPredicted RBP5.34□□□□□ -1.55
HERC1-215ENST00000561436 HSP90AA2PQ14568 343 aaPredicted RBP5.34□□□□□ -1.55
HERC1-215ENST00000561436 NR0B2Q15466 257 aa5.34□□□□□ -1.55
HERC1-215ENST00000561436 LONRF2Q1L5Z9 754 aa5.34□□□□□ -1.55
HERC1-215ENST00000561436 CPNE8Q86YQ8 564 aa5.34□□□□□ -1.55
HERC1-215ENST00000561436 LILRA2Q8N149 483 aa5.34□□□□□ -1.55
HERC1-215ENST00000561436 SYNPOQ8N3V7 929 aa5.34□□□□□ -1.55
HERC1-215ENST00000561436 SPATA9Q9BWV2 254 aa5.34□□□□□ -1.55
HERC1-215ENST00000561436 TMX1Q9H3N1 280 aa5.34□□□□□ -1.55
HERC1-215ENST00000561436 SF3B6Q9Y3B4 125 aaKnown RBP5.34□□□□□ -1.55
HERC1-215ENST00000561436 TAF6LQ9Y6J9 622 aa5.34□□□□□ -1.55
HERC1-215ENST00000561436 A0A087WZG4 1122 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 CCDC163A0A0D9SF12 145 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 NUDT19A8MXV4 375 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 C1QTNF9P0C862 333 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 LAPTM5Q13571 262 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 FAM84AQ96KN4 292 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 RNPC3Q96LT9 517 aaKnown RBP5.33□□□□□ -1.56
HERC1-215ENST00000561436 PTCHD1Q96NR3 888 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 CDC6Q99741 560 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 MCOLN1Q9GZU1 580 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 RXFP1Q9HBX9 757 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 GPRC5CQ9NQ84 441 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 FAM53CQ9NYF3 392 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 TNFRSF10DQ9UBN6 386 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 FBLN5Q9UBX5 448 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 PLA2G2DQ9UNK4 145 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 AKT3Q9Y243 479 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 HCFC2Q9Y5Z7 792 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 CEP170Q5SW79 1584 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 KIAA0586Q9BVV6 1533 aa5.33□□□□□ -1.56
HERC1-215ENST00000561436 PRDM2Q13029 1718 aa5.32□□□□□ -1.56
HERC1-215ENST00000561436 TRAV20A0A0B4J274 112 aa5.32□□□□□ -1.56
HERC1-215ENST00000561436 ETV2O00321 342 aaPredicted RBP5.32□□□□□ -1.56
HERC1-215ENST00000561436 AURKAO14965 403 aa5.32□□□□□ -1.56
HERC1-215ENST00000561436 DIAPH1O60610 1272 aaKnown RBP5.32□□□□□ -1.56
HERC1-215ENST00000561436 APPP05067 770 aa5.32□□□□□ -1.56
HERC1-215ENST00000561436 HMGB1P09429 215 aaKnown RBP5.32□□□□□ -1.56
HERC1-215ENST00000561436 POU4F1Q01851 419 aa5.32□□□□□ -1.56
HERC1-215ENST00000561436 MVKQ03426 396 aa5.32□□□□□ -1.56
HERC1-215ENST00000561436 SPATC1Q76KD6 591 aa5.32□□□□□ -1.56
HERC1-215ENST00000561436 LILRB2Q8N423 598 aa5.32□□□□□ -1.56
HERC1-215ENST00000561436 ARHGEF39Q8N4T4 335 aa5.32□□□□□ -1.56
HERC1-215ENST00000561436 FBXO15Q8NCQ5 510 aaPredicted RBP5.32□□□□□ -1.56
HERC1-215ENST00000561436 BVESQ8NE79 360 aa5.32□□□□□ -1.56
HERC1-215ENST00000561436 AARSD1Q9BTE6 412 aaKnown RBP5.32□□□□□ -1.56
HERC1-215ENST00000561436 SLC6A17Q9H1V8 727 aa5.32□□□□□ -1.56
HERC1-215ENST00000561436 FANCLQ9NW38 375 aa5.32□□□□□ -1.56
HERC1-215ENST00000561436 DIS3Q9Y2L1 958 aaKnown RBP5.32□□□□□ -1.56
HERC1-215ENST00000561436 PTPRGP23470 1445 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 CHD1O14646 1710 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 ANKRD62A6NC57 917 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 PPP1R12AO14974 1030 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms