RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 KIAA0355O15063 1070 aa18.66■□□□□ 0.58
LMX1B-204ENST00000561065 EDNRBP24530 442 aa18.66■□□□□ 0.58
LMX1B-204ENST00000561065 SLC35G1Q2M3R5 365 aa18.66■□□□□ 0.58
LMX1B-204ENST00000561065 QRICH1Q2TAL8 776 aa18.66■□□□□ 0.58
LMX1B-204ENST00000561065 IFIT1BQ5T764 474 aaKnown RBP18.66■□□□□ 0.58
LMX1B-204ENST00000561065 KIAA1211Q6ZU35 1233 aa18.66■□□□□ 0.58
LMX1B-204ENST00000561065 Q7L0L9 218 aa18.66■□□□□ 0.58
LMX1B-204ENST00000561065 PCSK9Q8NBP7 692 aaKnown RBP18.66■□□□□ 0.58
LMX1B-204ENST00000561065 GLT1D1Q96MS3 346 aa18.66■□□□□ 0.58
LMX1B-204ENST00000561065 SPC25Q9HBM1 224 aa18.66■□□□□ 0.58
LMX1B-204ENST00000561065 ELP1O95163 1332 aa18.65■□□□□ 0.58
LMX1B-204ENST00000561065 PARP1P09874 1014 aaKnown RBP18.65■□□□□ 0.58
LMX1B-204ENST00000561065 CDK7P50613 346 aa18.65■□□□□ 0.58
LMX1B-204ENST00000561065 EPHB4P54760 987 aa18.65■□□□□ 0.58
LMX1B-204ENST00000561065 NOL8Q76FK4 1167 aaKnown RBP18.65■□□□□ 0.58
LMX1B-204ENST00000561065 TBC1D5Q92609 795 aa18.65■□□□□ 0.58
LMX1B-204ENST00000561065 TOX2Q96NM4 488 aa18.65■□□□□ 0.58
LMX1B-204ENST00000561065 JMJD4Q9H9V9 463 aa18.65■□□□□ 0.58
LMX1B-204ENST00000561065 COL20A1Q9P218 1284 aa18.65■□□□□ 0.58
LMX1B-204ENST00000561065 ADD3Q9UEY8 706 aaKnown RBP18.65■□□□□ 0.58
LMX1B-204ENST00000561065 BAZ2BQ9UIF8 2168 aaKnown RBP18.65■□□□□ 0.58
LMX1B-204ENST00000561065 TBX21Q9UL17 535 aa18.65■□□□□ 0.58
LMX1B-204ENST00000561065 E7EWF7 191 aa18.64■□□□□ 0.57
LMX1B-204ENST00000561065 ANTXR2P58335 489 aa18.64■□□□□ 0.57
LMX1B-204ENST00000561065 COL9A3Q14050 684 aaPredicted RBP18.64■□□□□ 0.57
LMX1B-204ENST00000561065 SHHQ15465 462 aa18.64■□□□□ 0.57
LMX1B-204ENST00000561065 FSCN1Q16658 493 aaKnown RBP18.64■□□□□ 0.57
LMX1B-204ENST00000561065 CASC1Q6TDU7 716 aa18.64■□□□□ 0.57
LMX1B-204ENST00000561065 CXCL17Q6UXB2 119 aa18.64■□□□□ 0.57
LMX1B-204ENST00000561065 MAD2L2Q9UI95 211 aa18.64■□□□□ 0.57
LMX1B-204ENST00000561065 PNMA2Q9UL42 364 aa18.64■□□□□ 0.57
LMX1B-204ENST00000561065 U3KPZ7 1027 aaPredicted RBP18.64■□□□□ 0.57
LMX1B-204ENST00000561065 GRIN2DO15399 1336 aa18.63■□□□□ 0.57
LMX1B-204ENST00000561065 ABCB11O95342 1321 aa18.63■□□□□ 0.57
LMX1B-204ENST00000561065 SCN10AQ9Y5Y9 1956 aa18.63■□□□□ 0.57
LMX1B-204ENST00000561065 LOC102724159A0A0B4J2E5 919 aa18.63■□□□□ 0.57
LMX1B-204ENST00000561065 A0A0U1RQG5 324 aaPredicted RBP18.63■□□□□ 0.57
LMX1B-204ENST00000561065 RBM47A0AV96 593 aaKnown RBP18.63■□□□□ 0.57
LMX1B-204ENST00000561065 DYNC1LI2O43237 492 aaPredicted RBP18.63■□□□□ 0.57
LMX1B-204ENST00000561065 PPP1R11O60927 126 aaPredicted RBP18.63■□□□□ 0.57
LMX1B-204ENST00000561065 TRDNQ13061 729 aa18.63■□□□□ 0.57
LMX1B-204ENST00000561065 PWP2Q15269 919 aaKnown RBP18.63■□□□□ 0.57
LMX1B-204ENST00000561065 ERICH6BQ5W0A0 696 aa18.63■□□□□ 0.57
LMX1B-204ENST00000561065 IQSEC1Q6DN90 963 aa18.63■□□□□ 0.57
LMX1B-204ENST00000561065 GPR153Q6NV75 609 aa18.63■□□□□ 0.57
LMX1B-204ENST00000561065 FAM126BQ8IXS8 530 aa18.63■□□□□ 0.57
LMX1B-204ENST00000561065 MAP4K1Q92918 833 aa18.63■□□□□ 0.57
LMX1B-204ENST00000561065 TMEM39AQ9NV64 488 aa18.63■□□□□ 0.57
LMX1B-204ENST00000561065 RBM8AQ9Y5S9 174 aaKnown RBP18.63■□□□□ 0.57
LMX1B-204ENST00000561065 ARVCFO00192 962 aa18.62■□□□□ 0.57
LMX1B-204ENST00000561065 OPLAHO14841 1288 aa18.62■□□□□ 0.57
LMX1B-204ENST00000561065 DUSP28Q4G0W2 176 aa18.62■□□□□ 0.57
LMX1B-204ENST00000561065 CHST3Q7LGC8 479 aa18.62■□□□□ 0.57
LMX1B-204ENST00000561065 MB21D2Q8IYB1 491 aaPredicted RBP18.62■□□□□ 0.57
LMX1B-204ENST00000561065 MTMR8Q96EF0 704 aa18.62■□□□□ 0.57
LMX1B-204ENST00000561065 PALM3A6NDB9 673 aaPredicted RBP18.61■□□□□ 0.57
LMX1B-204ENST00000561065 DCDC2CA8MYV0 355 aa18.61■□□□□ 0.57
LMX1B-204ENST00000561065 DHX16O60231 1041 aaKnown RBP18.61■□□□□ 0.57
LMX1B-204ENST00000561065 GRM4Q14833 912 aa18.61■□□□□ 0.57
LMX1B-204ENST00000561065 SLC43A3Q8NBI5 491 aa18.61■□□□□ 0.57
LMX1B-204ENST00000561065 RGS22Q8NE09 1264 aa18.61■□□□□ 0.57
LMX1B-204ENST00000561065 DNERQ8NFT8 737 aa18.61■□□□□ 0.57
LMX1B-204ENST00000561065 SYTL5Q8TDW5 730 aaPredicted RBP18.61■□□□□ 0.57
LMX1B-204ENST00000561065 WDR11Q9BZH6 1224 aa18.61■□□□□ 0.57
LMX1B-204ENST00000561065 LSG1Q9H089 658 aaKnown RBP18.61■□□□□ 0.57
LMX1B-204ENST00000561065 AP5M1Q9H0R1 490 aa18.61■□□□□ 0.57
LMX1B-204ENST00000561065 VAT1LQ9HCJ6 419 aa18.61■□□□□ 0.57
LMX1B-204ENST00000561065 Q9Y3F1 56 aa18.61■□□□□ 0.57
LMX1B-204ENST00000561065 EYSQ5T1H1 3165 aa18.61■□□□□ 0.57
LMX1B-204ENST00000561065 MROH7Q68CQ1 1323 aa18.6■□□□□ 0.57
LMX1B-204ENST00000561065 KLRF2D3W0D1 207 aa18.6■□□□□ 0.57
LMX1B-204ENST00000561065 IFIT3O14879 490 aaKnown RBP18.6■□□□□ 0.57
LMX1B-204ENST00000561065 ARIH2O95376 493 aa18.6■□□□□ 0.57
LMX1B-204ENST00000561065 CD4P01730 458 aa18.6■□□□□ 0.57
LMX1B-204ENST00000561065 RAG1P15918 1043 aa18.6■□□□□ 0.57
LMX1B-204ENST00000561065 PSMC6P62333 389 aa18.6■□□□□ 0.57
LMX1B-204ENST00000561065 PDE4DQ08499 809 aa18.6■□□□□ 0.57
LMX1B-204ENST00000561065 RALYLQ86SE5 291 aaKnown RBP18.6■□□□□ 0.57
LMX1B-204ENST00000561065 FBXO11Q86XK2 927 aa18.6■□□□□ 0.57
LMX1B-204ENST00000561065 DEFB123Q8N688 67 aa18.6■□□□□ 0.57
LMX1B-204ENST00000561065 NCOA7Q8NI08 942 aa18.6■□□□□ 0.57
LMX1B-204ENST00000561065 COPS5Q92905 334 aa18.6■□□□□ 0.57
LMX1B-204ENST00000561065 TAAR1Q96RJ0 339 aa18.6■□□□□ 0.57
LMX1B-204ENST00000561065 CYTH3O43739 400 aa18.59■□□□□ 0.57
LMX1B-204ENST00000561065 TROAPQ12815 778 aa18.59■□□□□ 0.57
LMX1B-204ENST00000561065 BMP2KLQ5H9B9 411 aa18.59■□□□□ 0.57
LMX1B-204ENST00000561065 VTI1AQ96AJ9 217 aa18.59■□□□□ 0.57
LMX1B-204ENST00000561065 ESYT1Q9BSJ8 1104 aa18.59■□□□□ 0.57
LMX1B-204ENST00000561065 GPHNQ9NQX3 736 aaPredicted RBP18.59■□□□□ 0.57
LMX1B-204ENST00000561065 TIMP1P01033 207 aa18.58■□□□□ 0.57
LMX1B-204ENST00000561065 FPGSQ05932 587 aa18.58■□□□□ 0.57
LMX1B-204ENST00000561065 PPP2R5BQ15173 497 aa18.58■□□□□ 0.57
LMX1B-204ENST00000561065 TANC1Q9C0D5 1861 aa18.58■□□□□ 0.56
LMX1B-204ENST00000561065 UMODL1Q5DID0 1318 aa18.57■□□□□ 0.56
LMX1B-204ENST00000561065 CABYRO75952 493 aa18.57■□□□□ 0.56
LMX1B-204ENST00000561065 GHRHRQ02643 423 aa18.57■□□□□ 0.56
LMX1B-204ENST00000561065 ITGA7Q13683 1181 aa18.57■□□□□ 0.56
LMX1B-204ENST00000561065 WTAPQ15007 396 aa18.57■□□□□ 0.56
LMX1B-204ENST00000561065 OR6J1Q8NGC5 347 aa18.57■□□□□ 0.56
LMX1B-204ENST00000561065 IGDCC4Q8TDY8 1250 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms