RNA–Protein interactions for RNA: ENST00000560708.5

MRPS11-209, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 2

Gene MRPS11, Length 1,060 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-209ENST00000560708 GPATCH4Q5T3I0 446 aaKnown RBP16.11■□□□□ 0.17
MRPS11-209ENST00000560708 FAM109BQ6ICB4 259 aaPredicted RBP16.11■□□□□ 0.17
MRPS11-209ENST00000560708 KIAA1211Q6ZU35 1233 aa16.11■□□□□ 0.17
MRPS11-209ENST00000560708 FAM126BQ8IXS8 530 aa16.11■□□□□ 0.17
MRPS11-209ENST00000560708 PNMA1Q8ND90 353 aa16.11■□□□□ 0.17
MRPS11-209ENST00000560708 MORC4Q8TE76 937 aa16.11■□□□□ 0.17
MRPS11-209ENST00000560708 DSCC1Q9BVC3 393 aa16.11■□□□□ 0.17
MRPS11-209ENST00000560708 WDR19Q8NEZ3 1342 aa16.11■□□□□ 0.17
MRPS11-209ENST00000560708 TIMP1P01033 207 aa16.1■□□□□ 0.17
MRPS11-209ENST00000560708 GSPT1P15170 499 aaKnown RBP16.1■□□□□ 0.17
MRPS11-209ENST00000560708 IRX6P78412 446 aaPredicted RBP16.1■□□□□ 0.17
MRPS11-209ENST00000560708 IQSEC1Q6DN90 963 aa16.1■□□□□ 0.17
MRPS11-209ENST00000560708 RNF207Q6ZRF8 634 aa16.1■□□□□ 0.17
MRPS11-209ENST00000560708 DGKHQ86XP1 1220 aa16.1■□□□□ 0.17
MRPS11-209ENST00000560708 PPP1R12CQ9BZL4 782 aa16.1■□□□□ 0.17
MRPS11-209ENST00000560708 UBA5Q9GZZ9 404 aa16.1■□□□□ 0.17
MRPS11-209ENST00000560708 KAT14Q9H8E8 782 aa16.1■□□□□ 0.17
MRPS11-209ENST00000560708 TLR3O15455 904 aaKnown RBP16.09■□□□□ 0.17
MRPS11-209ENST00000560708 RPS6P62753 249 aaKnown RBP16.09■□□□□ 0.17
MRPS11-209ENST00000560708 SMAD3P84022 425 aaKnown RBP16.09■□□□□ 0.17
MRPS11-209ENST00000560708 ENAHQ8N8S7 591 aaPredicted RBP16.09■□□□□ 0.17
MRPS11-209ENST00000560708 ZSCAN10Q96SZ4 725 aaPredicted RBP16.09■□□□□ 0.17
MRPS11-209ENST00000560708 PNMA2Q9UL42 364 aa16.09■□□□□ 0.17
MRPS11-209ENST00000560708 TNKSO95271 1327 aa16.09■□□□□ 0.17
MRPS11-209ENST00000560708 NT5C2P49902 561 aa16.08■□□□□ 0.16
MRPS11-209ENST00000560708 PSMC6P62333 389 aa16.08■□□□□ 0.16
MRPS11-209ENST00000560708 CDC37Q16543 378 aaPredicted RBP16.08■□□□□ 0.16
MRPS11-209ENST00000560708 CCDC178Q5BJE1 867 aa16.08■□□□□ 0.16
MRPS11-209ENST00000560708 TTC22Q5TAA0 569 aa16.08■□□□□ 0.16
MRPS11-209ENST00000560708 MFSD5Q6N075 450 aa16.08■□□□□ 0.16
MRPS11-209ENST00000560708 WDR11Q9BZH6 1224 aa16.08■□□□□ 0.16
MRPS11-209ENST00000560708 ZSWIM5Q9P217 1185 aa16.08■□□□□ 0.16
MRPS11-209ENST00000560708 CTNNA3Q9UI47 895 aa16.08■□□□□ 0.16
MRPS11-209ENST00000560708 CDH23Q9H251 3354 aa16.07■□□□□ 0.16
MRPS11-209ENST00000560708 LOC102724159A0A0B4J2E5 919 aa16.07■□□□□ 0.16
MRPS11-209ENST00000560708 ZEB2O60315 1214 aa16.07■□□□□ 0.16
MRPS11-209ENST00000560708 CABYRO75952 493 aa16.07■□□□□ 0.16
MRPS11-209ENST00000560708 CD4P01730 458 aa16.07■□□□□ 0.16
MRPS11-209ENST00000560708 CSF2RAP15509 400 aa16.07■□□□□ 0.16
MRPS11-209ENST00000560708 PDE4DQ08499 809 aa16.07■□□□□ 0.16
MRPS11-209ENST00000560708 ITGA7Q13683 1181 aa16.07■□□□□ 0.16
MRPS11-209ENST00000560708 PWP2Q15269 919 aaKnown RBP16.07■□□□□ 0.16
MRPS11-209ENST00000560708 DUSP28Q4G0W2 176 aa16.07■□□□□ 0.16
MRPS11-209ENST00000560708 SLC43A3Q8NBI5 491 aa16.07■□□□□ 0.16
MRPS11-209ENST00000560708 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.07■□□□□ 0.16
MRPS11-209ENST00000560708 UBAC1Q9BSL1 405 aa16.07■□□□□ 0.16
MRPS11-209ENST00000560708 KRT23Q9C075 422 aa16.07■□□□□ 0.16
MRPS11-209ENST00000560708 TTYH1Q9H313 450 aaPredicted RBP16.07■□□□□ 0.16
MRPS11-209ENST00000560708 Q9Y3F1 56 aa16.07■□□□□ 0.16
MRPS11-209ENST00000560708 GRIN2DO15399 1336 aa16.07■□□□□ 0.16
MRPS11-209ENST00000560708 UMODL1Q5DID0 1318 aa16.06■□□□□ 0.16
MRPS11-209ENST00000560708 DHX16O60231 1041 aaKnown RBP16.06■□□□□ 0.16
MRPS11-209ENST00000560708 CENPBP07199 599 aaPredicted RBP16.06■□□□□ 0.16
MRPS11-209ENST00000560708 CYP2C18P33260 490 aa16.06■□□□□ 0.16
MRPS11-209ENST00000560708 PPIGQ13427 754 aaKnown RBP eCLIP16.06■□□□□ 0.16
MRPS11-209ENST00000560708 ASPRV1Q53RT3 343 aa16.06■□□□□ 0.16
MRPS11-209ENST00000560708 ADGRF4Q8IZF3 695 aa16.06■□□□□ 0.16
MRPS11-209ENST00000560708 OR6J1Q8NGC5 347 aa16.06■□□□□ 0.16
MRPS11-209ENST00000560708 ANKS1AQ92625 1134 aa16.06■□□□□ 0.16
MRPS11-209ENST00000560708 CDX2Q99626 313 aaPredicted RBP16.06■□□□□ 0.16
MRPS11-209ENST00000560708 CNNM2Q9H8M5 875 aa16.06■□□□□ 0.16
MRPS11-209ENST00000560708 EYSQ5T1H1 3165 aa16.05■□□□□ 0.16
MRPS11-209ENST00000560708 RAD50Q92878 1312 aa16.05■□□□□ 0.16
MRPS11-209ENST00000560708 B4GALT4O60513 344 aa16.05■□□□□ 0.16
MRPS11-209ENST00000560708 PARP1P09874 1014 aaKnown RBP16.05■□□□□ 0.16
MRPS11-209ENST00000560708 ACRP10323 421 aa16.05■□□□□ 0.16
MRPS11-209ENST00000560708 EDNRBP24530 442 aa16.05■□□□□ 0.16
MRPS11-209ENST00000560708 PPP2R5BQ15173 497 aa16.05■□□□□ 0.16
MRPS11-209ENST00000560708 TMEM199Q8N511 208 aa16.05■□□□□ 0.16
MRPS11-209ENST00000560708 DNERQ8NFT8 737 aa16.05■□□□□ 0.16
MRPS11-209ENST00000560708 MPHOSPH6Q99547 160 aaKnown RBP16.05■□□□□ 0.16
MRPS11-209ENST00000560708 TRPV6Q9H1D0 765 aa16.05■□□□□ 0.16
MRPS11-209ENST00000560708 SEMA6BQ9H3T3 888 aa16.05■□□□□ 0.16
MRPS11-209ENST00000560708 HIPK3Q9H422 1215 aa16.05■□□□□ 0.16
MRPS11-209ENST00000560708 ABCB11O95342 1321 aa16.04■□□□□ 0.16
MRPS11-209ENST00000560708 RBM47A0AV96 593 aaKnown RBP16.04■□□□□ 0.16
MRPS11-209ENST00000560708 MYL3P08590 195 aa16.04■□□□□ 0.16
MRPS11-209ENST00000560708 CPT1AP50416 773 aa16.04■□□□□ 0.16
MRPS11-209ENST00000560708 QRICH1Q2TAL8 776 aa16.04■□□□□ 0.16
MRPS11-209ENST00000560708 TMEM240Q5SV17 173 aa16.04■□□□□ 0.16
MRPS11-209ENST00000560708 IFIT1BQ5T764 474 aaKnown RBP16.04■□□□□ 0.16
MRPS11-209ENST00000560708 C16orf59Q7L2K0 433 aa16.04■□□□□ 0.16
MRPS11-209ENST00000560708 TBC1D5Q92609 795 aa16.04■□□□□ 0.16
MRPS11-209ENST00000560708 COPS5Q92905 334 aa16.04■□□□□ 0.16
MRPS11-209ENST00000560708 VAT1LQ9HCJ6 419 aa16.04■□□□□ 0.16
MRPS11-209ENST00000560708 UNC80Q8N2C7 3258 aa16.04■□□□□ 0.16
MRPS11-209ENST00000560708 A0A0C4DFX4 3053 aa16.03■□□□□ 0.16
MRPS11-209ENST00000560708 DNAJB2P25686 324 aa16.03■□□□□ 0.16
MRPS11-209ENST00000560708 PURAQ00577 322 aaKnown RBP16.03■□□□□ 0.16
MRPS11-209ENST00000560708 PSRC1Q6PGN9 363 aaPredicted RBP16.03■□□□□ 0.16
MRPS11-209ENST00000560708 CYB5R4Q7L1T6 521 aa16.03■□□□□ 0.16
MRPS11-209ENST00000560708 STAG2Q8N3U4 1231 aa16.03■□□□□ 0.16
MRPS11-209ENST00000560708 SCFD2Q8WU76 684 aa16.03■□□□□ 0.16
MRPS11-209ENST00000560708 MYLIPQ8WY64 445 aa16.03■□□□□ 0.16
MRPS11-209ENST00000560708 JMJD4Q9H9V9 463 aa16.03■□□□□ 0.16
MRPS11-209ENST00000560708 POLR3EQ9NVU0 708 aa16.03■□□□□ 0.16
MRPS11-209ENST00000560708 COL20A1Q9P218 1284 aa16.03■□□□□ 0.16
MRPS11-209ENST00000560708 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.02■□□□□ 0.16
MRPS11-209ENST00000560708 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.02■□□□□ 0.16
MRPS11-209ENST00000560708 DLL1O00548 723 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms