RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 MFSD14BQ5SR56 506 aa14.4□□□□□ -0.1
CSPG4P11-201ENST00000560634 SYMPKQ92797 1274 aaKnown RBP14.4□□□□□ -0.1
CSPG4P11-201ENST00000560634 CNOT6LQ96LI5 555 aaKnown RBP14.4□□□□□ -0.1
CSPG4P11-201ENST00000560634 NT5C1BQ96P26 610 aa14.4□□□□□ -0.1
CSPG4P11-201ENST00000560634 SPC25Q9HBM1 224 aa14.4□□□□□ -0.1
CSPG4P11-201ENST00000560634 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.4□□□□□ -0.1
CSPG4P11-201ENST00000560634 PHLPP2Q6ZVD8 1323 aa14.4□□□□□ -0.1
CSPG4P11-201ENST00000560634 ARHGEF10O15013 1369 aa14.4□□□□□ -0.1
CSPG4P11-201ENST00000560634 SPECC1L-ADORA2AF8WAN1 911 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 KMT5BQ4FZB7 885 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 ARHGEF18Q6ZSZ5 1173 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 SLC35F6Q8N357 371 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 PPP1R13BQ96KQ4 1090 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 POLR3EQ9NVU0 708 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 DMP1Q13316 513 aaPredicted RBP14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 FNBP4Q8N3X1 1017 aaPredicted RBP14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 MAP4K1Q92918 833 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 EDC3Q96F86 508 aaKnown RBP14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 RNF26Q9BY78 433 aaPredicted RBP14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 DRC3Q9H069 523 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 CNOT10Q9H9A5 744 aaKnown RBP14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 STAP2Q9UGK3 403 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 A0A087WUV0 522 aaPredicted RBP14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 TESPA1A2RU30 521 aaPredicted RBP14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 OATP04181 439 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 ARHGEF16Q5VV41 709 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 GPT2Q8TD30 523 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 EPS15L1Q9UBC2 864 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 MAD1L1Q9Y6D9 718 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 KDRP35968 1356 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 H7C0C1 242 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 ZBTB24O43167 697 aaPredicted RBP14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 ATP5OP48047 213 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 ANKRD20A4Q4UJ75 823 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 ANKRD20A8PQ5CZ79 823 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 ANKRD20A2Q5SQ80 823 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 ANKRD20A1Q5TYW2 823 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 PLA2G4DQ86XP0 818 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 UHMK1Q8TAS1 419 aaKnown RBP14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 NRBP2Q9NSY0 501 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 PALD1Q9ULE6 856 aa14.39□□□□□ -0.11
CSPG4P11-201ENST00000560634 RASSF7Q02833 373 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 ANKRD13CQ8N6S4 541 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 CCDC127Q96BQ5 260 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 EFHD1Q9BUP0 239 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 PGRMC1O00264 195 aaKnown RBP14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 LPXNO60711 386 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 GAP43P17677 238 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 ZBTB17Q13105 803 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 PDZD8Q8NEN9 1154 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 UIMC1Q96RL1 719 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 MED10Q9BTT4 135 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 ANKFY1Q9P2R3 1169 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 ADCY9O60503 1353 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 SESN3P58005 492 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 FKBP3Q00688 224 aaKnown RBP14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 IFT88Q13099 833 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 PRPSAP1Q14558 356 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 CLIC6Q96NY7 704 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 MMS19Q96T76 1030 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 GPR108Q9NPR9 543 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 ABCC10Q5T3U5 1492 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 A6NJR5 290 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 ESRRGP62508 458 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 PPP2R5AQ15172 486 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 MAN2A1Q16706 1144 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 CAPN12Q6ZSI9 719 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 HDAC11Q96DB2 347 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 TRIM4Q9C037 500 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 COPRSQ9NQ92 184 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 WDR70Q9NW82 654 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 ITSN2Q9NZM3 1697 aa14.38□□□□□ -0.11
CSPG4P11-201ENST00000560634 HEXIM1O94992 359 aaKnown RBP14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 DLATP10515 647 aaKnown RBP14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 TMOD1P28289 359 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 STX1BP61266 288 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 ADAT2Q7Z6V5 191 aaKnown RBP14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 NIM1KQ8IY84 436 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 CCHCR1Q8TD31 782 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 TRIM56Q9BRZ2 755 aaKnown RBP14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 XPOTO43592 962 aaKnown RBP14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 ECM2O94769 699 aaPredicted RBP14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 PCCAP05165 728 aaPredicted RBP14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 ATP2B4P23634 1241 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 C10orf76Q5T2E6 689 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 TMTC3Q6ZXV5 915 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 ZNF710Q8N1W2 664 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 BBS5Q8N3I7 341 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 EXOC4Q96A65 974 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 CCDC17Q96LX7 622 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 ADAMTS12P58397 1594 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 POC1B-GALNT4F8VUJ3 575 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 HSPA8P11142 646 aaKnown RBP14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 GCFC2P16383 781 aaKnown RBP14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 MESDQ14696 234 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 ODR4Q5SWX8 454 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 GPATCH4Q5T3I0 446 aaKnown RBP14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 SCYL3Q8IZE3 742 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 FBXO41Q8TF61 875 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms