RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 RNF26Q9BY78 433 aaPredicted RBP16.14■□□□□ 0.17
PKNOX1-209ENST00000560448 RNF208Q9H0X6 261 aa16.14■□□□□ 0.17
PKNOX1-209ENST00000560448 ABHD16BQ9H3Z7 469 aa16.14■□□□□ 0.17
PKNOX1-209ENST00000560448 FAM217BQ9NTX9 383 aaPredicted RBP16.14■□□□□ 0.17
PKNOX1-209ENST00000560448 CCDC85CA6NKD9 419 aa16.13■□□□□ 0.17
PKNOX1-209ENST00000560448 CPLX1O14810 134 aa16.13■□□□□ 0.17
PKNOX1-209ENST00000560448 PPP1R11O60927 126 aaPredicted RBP16.13■□□□□ 0.17
PKNOX1-209ENST00000560448 CCL5P13501 91 aa16.13■□□□□ 0.17
PKNOX1-209ENST00000560448 CDC27P30260 824 aa16.13■□□□□ 0.17
PKNOX1-209ENST00000560448 HSD17B4P51659 736 aa16.13■□□□□ 0.17
PKNOX1-209ENST00000560448 AKAP17AQ02040 695 aaKnown RBP16.13■□□□□ 0.17
PKNOX1-209ENST00000560448 CACNB2Q08289 660 aaPredicted RBP16.13■□□□□ 0.17
PKNOX1-209ENST00000560448 BAATQ14032 418 aaPredicted RBP16.13■□□□□ 0.17
PKNOX1-209ENST00000560448 TRIM22Q8IYM9 498 aa16.13■□□□□ 0.17
PKNOX1-209ENST00000560448 MORC4Q8TE76 937 aa16.13■□□□□ 0.17
PKNOX1-209ENST00000560448 CCDC12Q8WUD4 166 aaPredicted RBP16.13■□□□□ 0.17
PKNOX1-209ENST00000560448 KIF2CQ99661 725 aa16.13■□□□□ 0.17
PKNOX1-209ENST00000560448 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.13■□□□□ 0.17
PKNOX1-209ENST00000560448 FLRT1Q9NZU1 646 aa16.13■□□□□ 0.17
PKNOX1-209ENST00000560448 SMCHD1A6NHR9 2005 aa16.12■□□□□ 0.17
PKNOX1-209ENST00000560448 PIK3CDO00329 1044 aa16.12■□□□□ 0.17
PKNOX1-209ENST00000560448 PRPF3O43395 683 aaKnown RBP16.12■□□□□ 0.17
PKNOX1-209ENST00000560448 CYBAP13498 195 aa16.12■□□□□ 0.17
PKNOX1-209ENST00000560448 ADD1P35611 737 aaKnown RBP16.12■□□□□ 0.17
PKNOX1-209ENST00000560448 GJA8P48165 433 aa16.12■□□□□ 0.17
PKNOX1-209ENST00000560448 AK2P54819 239 aa16.12■□□□□ 0.17
PKNOX1-209ENST00000560448 RAB11FIP4Q86YS3 637 aa16.12■□□□□ 0.17
PKNOX1-209ENST00000560448 IWS1Q96ST2 819 aa16.12■□□□□ 0.17
PKNOX1-209ENST00000560448 SLKQ9H2G2 1235 aaPredicted RBP16.12■□□□□ 0.17
PKNOX1-209ENST00000560448 BAZ2BQ9UIF8 2168 aaKnown RBP16.12■□□□□ 0.17
PKNOX1-209ENST00000560448 GCOM1H8Y6P7 765 aaPredicted RBP16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 SEPT4O43236 478 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 ST18O60284 1047 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 POLR2MP0CAP2 368 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 ALDH5A1P51649 535 aaPredicted RBP16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 SLC30A10Q6XR72 485 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 ARMCX2Q7L311 632 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 NSUN6Q8TEA1 469 aaKnown RBP16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 CUL5Q93034 780 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 PFKFB2O60825 505 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 CFBP00751 764 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 CALML3P27482 149 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 CYP2C19P33261 490 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 CNTN2Q02246 1040 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 BECN1Q14457 450 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 MTFR1Q15390 333 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 NTRK3Q16288 839 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 PFKFB3Q16875 520 aaPredicted RBP16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 MCTP2Q6DN12 878 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 CMTR1Q8N1G2 835 aaKnown RBP16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 CCDC82Q8N4S0 544 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 SYTL5Q8TDW5 730 aaPredicted RBP16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 ZSCAN31Q96LW9 406 aaPredicted RBP16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 FGD4Q96M96 766 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 UNC93B1Q9H1C4 597 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 BARHL2Q9NY43 387 aa16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 V9GY48 417 aaPredicted RBP16.11■□□□□ 0.17
PKNOX1-209ENST00000560448 SOWAHBA6NEL2 793 aa16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 OPLAHO14841 1288 aa16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 SGPL1O95470 568 aa16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 SCG2P13521 617 aa16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 AKR1A1P14550 325 aa16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 EDNRBP24530 442 aa16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 MCM2P49736 904 aa16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 HEATR3Q7Z4Q2 680 aa16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 ANKLE1Q8NAG6 615 aa16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 CCDC148Q8NFR7 591 aa16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 CRISPLD2Q9H0B8 497 aa16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 PSTPIP2Q9H939 334 aa16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 VTA1Q9NP79 307 aa16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 SH3GLB2Q9NR46 395 aa16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 SH2B1Q9NRF2 756 aaPredicted RBP16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 DDX20Q9UHI6 824 aaKnown RBP16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 TPCN1Q9ULQ1 816 aa16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 LIMCH1Q9UPQ0 1083 aa16.1■□□□□ 0.17
PKNOX1-209ENST00000560448 CENPFP49454 3210 aa16.09■□□□□ 0.17
PKNOX1-209ENST00000560448 ESYT2A0FGR8 921 aa16.09■□□□□ 0.17
PKNOX1-209ENST00000560448 DEXIO95424 95 aa16.09■□□□□ 0.17
PKNOX1-209ENST00000560448 SNAI1O95863 264 aaPredicted RBP16.09■□□□□ 0.17
PKNOX1-209ENST00000560448 CCT2P78371 535 aaKnown RBP16.09■□□□□ 0.17
PKNOX1-209ENST00000560448 SSRP1Q08945 709 aaKnown RBP16.09■□□□□ 0.17
PKNOX1-209ENST00000560448 TRIM32Q13049 653 aa16.09■□□□□ 0.17
PKNOX1-209ENST00000560448 ACVR2BQ13705 512 aa16.09■□□□□ 0.17
PKNOX1-209ENST00000560448 U2AF1L4Q8WU68 220 aaKnown RBP16.09■□□□□ 0.17
PKNOX1-209ENST00000560448 RMDN3Q96TC7 470 aa16.09■□□□□ 0.17
PKNOX1-209ENST00000560448 STK36Q9NRP7 1315 aa16.08■□□□□ 0.17
PKNOX1-209ENST00000560448 STAM2O75886 525 aa16.08■□□□□ 0.16
PKNOX1-209ENST00000560448 ZNF865P0CJ78 1059 aaPredicted RBP16.08■□□□□ 0.16
PKNOX1-209ENST00000560448 TAL1P17542 331 aaPredicted RBP16.08■□□□□ 0.16
PKNOX1-209ENST00000560448 NAPAP54920 295 aa16.08■□□□□ 0.16
PKNOX1-209ENST00000560448 SCRN1Q12765 414 aa16.08■□□□□ 0.16
PKNOX1-209ENST00000560448 WWC2Q6AWC2 1192 aa16.08■□□□□ 0.16
PKNOX1-209ENST00000560448 XRRA1Q6P2D8 792 aa16.08■□□□□ 0.16
PKNOX1-209ENST00000560448 SMARCC2Q8TAQ2 1214 aa16.08■□□□□ 0.16
PKNOX1-209ENST00000560448 PIBF1Q8WXW3 757 aa16.08■□□□□ 0.16
PKNOX1-209ENST00000560448 WASF1Q92558 559 aa16.08■□□□□ 0.16
PKNOX1-209ENST00000560448 GTF3C6Q969F1 213 aa16.08■□□□□ 0.16
PKNOX1-209ENST00000560448 SNX21Q969T3 373 aa16.08■□□□□ 0.16
PKNOX1-209ENST00000560448 DEFB118Q96PH6 123 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms