RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 MTIF3Q9H2K0 278 aaKnown RBP15.92■□□□□ 0.14
SMAD3-214ENST00000560402 OSBPL3Q9H4L5 887 aa15.92■□□□□ 0.14
SMAD3-214ENST00000560402 CDH23Q9H251 3354 aa15.92■□□□□ 0.14
SMAD3-214ENST00000560402 FRMPD2Q68DX3 1309 aaPredicted RBP15.92■□□□□ 0.14
SMAD3-214ENST00000560402 HIP1O00291 1037 aa15.91■□□□□ 0.14
SMAD3-214ENST00000560402 SLC16A2P36021 539 aa15.91■□□□□ 0.14
SMAD3-214ENST00000560402 HAND2P61296 217 aa15.91■□□□□ 0.14
SMAD3-214ENST00000560402 ITGA7Q13683 1181 aa15.91■□□□□ 0.14
SMAD3-214ENST00000560402 BAATQ14032 418 aaPredicted RBP15.91■□□□□ 0.14
SMAD3-214ENST00000560402 DUSP28Q4G0W2 176 aa15.91■□□□□ 0.14
SMAD3-214ENST00000560402 TTBK2Q6IQ55 1244 aa15.91■□□□□ 0.14
SMAD3-214ENST00000560402 CXCL17Q6UXB2 119 aa15.91■□□□□ 0.14
SMAD3-214ENST00000560402 PPP1R12CQ9BZL4 782 aa15.91■□□□□ 0.14
SMAD3-214ENST00000560402 MAF1Q9H063 256 aa15.91■□□□□ 0.14
SMAD3-214ENST00000560402 SCN10AQ9Y5Y9 1956 aa15.91■□□□□ 0.14
SMAD3-214ENST00000560402 TANC1Q9C0D5 1861 aa15.91■□□□□ 0.14
SMAD3-214ENST00000560402 PTPDC1A2A3K4 754 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 NFIBO00712 420 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 DYNC1LI2O43237 492 aaPredicted RBP15.9■□□□□ 0.14
SMAD3-214ENST00000560402 FOSL2P15408 326 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 CSF2RAP15509 400 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 SDSP20132 328 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 TMEM240Q5SV17 173 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 RASIP1Q5U651 963 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 KIAA1211Q6ZU35 1233 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 EEPD1Q7L9B9 569 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 CHD1LQ86WJ1 897 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 TBC1D10CQ8IV04 446 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 DNERQ8NFT8 737 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 MYLIPQ8WY64 445 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 HIPK3Q9H422 1215 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 GPCPD1Q9NPB8 672 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 POLR3EQ9NVU0 708 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 GBF1Q92538 1859 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 RAD50Q92878 1312 aa15.9■□□□□ 0.14
SMAD3-214ENST00000560402 EYSQ5T1H1 3165 aa15.89■□□□□ 0.13
SMAD3-214ENST00000560402 RBM47A0AV96 593 aaKnown RBP15.89■□□□□ 0.13
SMAD3-214ENST00000560402 B4DLN1 442 aa15.89■□□□□ 0.13
SMAD3-214ENST00000560402 NKRFO15226 690 aaKnown RBP eCLIP15.89■□□□□ 0.13
SMAD3-214ENST00000560402 CPT1AP50416 773 aa15.89■□□□□ 0.13
SMAD3-214ENST00000560402 MRPL12P52815 198 aaKnown RBP15.89■□□□□ 0.13
SMAD3-214ENST00000560402 SLC30A10Q6XR72 485 aa15.89■□□□□ 0.13
SMAD3-214ENST00000560402 RNF207Q6ZRF8 634 aa15.89■□□□□ 0.13
SMAD3-214ENST00000560402 IQCA1Q86XH1 822 aa15.89■□□□□ 0.13
SMAD3-214ENST00000560402 DGKHQ86XP1 1220 aa15.89■□□□□ 0.13
SMAD3-214ENST00000560402 IL23AQ9NPF7 189 aa15.89■□□□□ 0.13
SMAD3-214ENST00000560402 PDGFCQ9NRA1 345 aa15.89■□□□□ 0.13
SMAD3-214ENST00000560402 DIAPH3Q9NSV4 1193 aa15.89■□□□□ 0.13
SMAD3-214ENST00000560402 NEDD4P46934 1319 aa15.89■□□□□ 0.13
SMAD3-214ENST00000560402 ZNF213O14771 459 aa15.88■□□□□ 0.13
SMAD3-214ENST00000560402 EDNRBP24530 442 aa15.88■□□□□ 0.13
SMAD3-214ENST00000560402 BRDTQ58F21 947 aaPredicted RBP15.88■□□□□ 0.13
SMAD3-214ENST00000560402 PLEKHM2Q8IWE5 1019 aa15.88■□□□□ 0.13
SMAD3-214ENST00000560402 CLEC4DQ8WXI8 215 aa15.88■□□□□ 0.13
SMAD3-214ENST00000560402 TIFAQ96CG3 184 aa15.88■□□□□ 0.13
SMAD3-214ENST00000560402 WDR11Q9BZH6 1224 aa15.88■□□□□ 0.13
SMAD3-214ENST00000560402 KIAA1217Q5T5P2 1943 aa15.88■□□□□ 0.13
SMAD3-214ENST00000560402 EIF5BO60841 1220 aaKnown RBP15.87■□□□□ 0.13
SMAD3-214ENST00000560402 CALML3P27482 149 aa15.87■□□□□ 0.13
SMAD3-214ENST00000560402 RPS6P62753 249 aaKnown RBP15.87■□□□□ 0.13
SMAD3-214ENST00000560402 NUCB1Q02818 461 aa15.87■□□□□ 0.13
SMAD3-214ENST00000560402 PDE4DQ08499 809 aa15.87■□□□□ 0.13
SMAD3-214ENST00000560402 PPP2R5BQ15173 497 aa15.87■□□□□ 0.13
SMAD3-214ENST00000560402 RAB30Q15771 203 aa15.87■□□□□ 0.13
SMAD3-214ENST00000560402 RGS22Q8NE09 1264 aa15.87■□□□□ 0.13
SMAD3-214ENST00000560402 HERVK_113Q902F9 699 aa15.87■□□□□ 0.13
SMAD3-214ENST00000560402 DSCC1Q9BVC3 393 aa15.87■□□□□ 0.13
SMAD3-214ENST00000560402 NOC4LQ9BVI4 516 aaKnown RBP15.87■□□□□ 0.13
SMAD3-214ENST00000560402 UPF2Q9HAU5 1272 aaKnown RBP15.87■□□□□ 0.13
SMAD3-214ENST00000560402 DDX49Q9Y6V7 483 aaKnown RBP15.87■□□□□ 0.13
SMAD3-214ENST00000560402 GRIN2DO15399 1336 aa15.87■□□□□ 0.13
SMAD3-214ENST00000560402 B4GALT4O60513 344 aa15.86■□□□□ 0.13
SMAD3-214ENST00000560402 SUPT20HL2P0C7V6 817 aa15.86■□□□□ 0.13
SMAD3-214ENST00000560402 CYP2C18P33260 490 aa15.86■□□□□ 0.13
SMAD3-214ENST00000560402 PURAQ00577 322 aaKnown RBP15.86■□□□□ 0.13
SMAD3-214ENST00000560402 ASPRV1Q53RT3 343 aa15.86■□□□□ 0.13
SMAD3-214ENST00000560402 ZNF365Q70YC5 407 aa15.86■□□□□ 0.13
SMAD3-214ENST00000560402 C16orf59Q7L2K0 433 aa15.86■□□□□ 0.13
SMAD3-214ENST00000560402 PNMA1Q8ND90 353 aa15.86■□□□□ 0.13
SMAD3-214ENST00000560402 OR6J1Q8NGC5 347 aa15.86■□□□□ 0.13
SMAD3-214ENST00000560402 SCFD2Q8WU76 684 aa15.86■□□□□ 0.13
SMAD3-214ENST00000560402 PURBQ96QR8 312 aaKnown RBP15.86■□□□□ 0.13
SMAD3-214ENST00000560402 ALDH8A1Q9H2A2 487 aaPredicted RBP15.86■□□□□ 0.13
SMAD3-214ENST00000560402 ZNF576Q9H609 170 aa15.86■□□□□ 0.13
SMAD3-214ENST00000560402 KAT14Q9H8E8 782 aa15.86■□□□□ 0.13
SMAD3-214ENST00000560402 KPNA6O60684 536 aa15.85■□□□□ 0.13
SMAD3-214ENST00000560402 PFKMP08237 780 aa15.85■□□□□ 0.13
SMAD3-214ENST00000560402 IMMTQ16891 758 aaKnown RBP15.85■□□□□ 0.13
SMAD3-214ENST00000560402 CWC27Q6UX04 472 aaKnown RBP15.85■□□□□ 0.13
SMAD3-214ENST00000560402 RPUSD2Q8IZ73 545 aaKnown RBP15.85■□□□□ 0.13
SMAD3-214ENST00000560402 ANKS1AQ92625 1134 aa15.85■□□□□ 0.13
SMAD3-214ENST00000560402 MTG1Q9BT17 334 aaPredicted RBP15.85■□□□□ 0.13
SMAD3-214ENST00000560402 COL25A1Q9BXS0 654 aaPredicted RBP15.85■□□□□ 0.13
SMAD3-214ENST00000560402 PBX4Q9BYU1 374 aa15.85■□□□□ 0.13
SMAD3-214ENST00000560402 CNNM2Q9H8M5 875 aa15.85■□□□□ 0.13
SMAD3-214ENST00000560402 GPHNQ9NQX3 736 aaPredicted RBP15.85■□□□□ 0.13
SMAD3-214ENST00000560402 CTNNA3Q9UI47 895 aa15.85■□□□□ 0.13
SMAD3-214ENST00000560402 ABCB11O95342 1321 aa15.85■□□□□ 0.13
SMAD3-214ENST00000560402 PRUNE2Q8WUY3 3088 aa15.84■□□□□ 0.13
SMAD3-214ENST00000560402 KDM4AO75164 1064 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms