RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-223ENST00000560369 USP17L20D6RJB6 530 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 POLR3GO15318 223 aaPredicted RBP6.48□□□□□ -1.37
LRRC49-223ENST00000560369 STX10O60499 249 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 GNAQP50148 359 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 CLCN6P51797 869 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 USP17L24Q0WX57 530 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 LRRC41Q15345 812 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 ARHGAP29Q52LW3 1261 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 CCDC178Q5BJE1 867 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 ANKRD40Q6AI12 368 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 USP17L6PQ6QN14 398 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 NEK8Q86SG6 692 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 SIAH1Q8IUQ4 282 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 KIAA0895Q8NCT3 520 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 AKT1S1Q96B36 256 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 FGFBP2Q9BYJ0 223 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 BCAS3Q9H6U6 928 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 POLD4Q9HCU8 107 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 SLC39A2Q9NP94 309 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 BLOC1S4Q9NUP1 217 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 SCAF8Q9UPN6 1271 aaKnown RBP6.48□□□□□ -1.37
LRRC49-223ENST00000560369 REXO2Q9Y3B8 237 aaKnown RBP6.48□□□□□ -1.37
LRRC49-223ENST00000560369 MYMKA6NI61 221 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 PES1O00541 588 aaKnown RBP6.48□□□□□ -1.37
LRRC49-223ENST00000560369 SEC31AO94979 1220 aaKnown RBP6.48□□□□□ -1.37
LRRC49-223ENST00000560369 GDF11O95390 407 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 APBA3O96018 575 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 TNNI2P48788 182 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 SLC27A3Q5K4L6 730 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 TTI2Q6NXR4 508 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 REXO1Q8N1G1 1221 aaKnown RBP6.48□□□□□ -1.37
LRRC49-223ENST00000560369 CCDC148Q8NFR7 591 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 MTMR9Q96QG7 549 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 SLF1Q9BQI6 1058 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 TRIM9Q9C026 710 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 CCSER1Q9C0I3 900 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 COA1Q9GZY4 146 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 SEMA6BQ9H3T3 888 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 FAM198AQ9UFP1 575 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 SERPINB13Q9UIV8 391 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 FHOD1Q9Y613 1164 aa6.48□□□□□ -1.37
LRRC49-223ENST00000560369 NPHP3-ACAD11A0A0J9YXS1 232 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 TTC26A0AVF1 554 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 LRRC10BA6NIK2 292 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 B4DLN1 442 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 MYO1BO43795 1136 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 SNHG28P0DPA3 235 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 H2AFXP16104 143 aaPredicted RBP6.47□□□□□ -1.37
LRRC49-223ENST00000560369 CRKP46108 304 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 PLA2G4AP47712 749 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 UBXN1Q04323 297 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 PDE4DQ08499 809 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 ZNF543Q08ER8 600 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 TAF3Q5VWG9 929 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 PPFIBP1Q86W92 1011 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 GIMAP8Q8ND71 665 aaPredicted RBP6.47□□□□□ -1.37
LRRC49-223ENST00000560369 TBC1D22AQ8WUA7 517 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 HAS1Q92839 578 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 C6orf50Q9HD87 102 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 AGPAT5Q9NUQ2 364 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 SEC63Q9UGP8 760 aaKnown RBP6.47□□□□□ -1.37
LRRC49-223ENST00000560369 PHLPP2Q6ZVD8 1323 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 EPHB6O15197 1021 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 TADA3O75528 432 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 RHOBTB3O94955 611 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 PNMA6AP0CW24 399 aaPredicted RBP6.47□□□□□ -1.37
LRRC49-223ENST00000560369 PLCG2P16885 1265 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 STAT3P40763 770 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 RBM5P52756 815 aaKnown RBP eCLIP6.47□□□□□ -1.37
LRRC49-223ENST00000560369 ASIC1P78348 528 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 RAD51AP2Q09MP3 1159 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 SEPT2Q15019 361 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 CCDC96Q2M329 555 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 SOGA3Q5TF21 947 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 WDR59Q6PJI9 974 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 TMED8Q6PL24 325 aaPredicted RBP6.47□□□□□ -1.37
LRRC49-223ENST00000560369 KRT25Q7Z3Z0 450 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 CDAN1Q8IWY9 1227 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 CCDC155Q8N6L0 562 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 ZNF507Q8TCN5 953 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 ZFP91Q96JP5 570 aaPredicted RBP6.47□□□□□ -1.37
LRRC49-223ENST00000560369 PANX2Q96RD6 677 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 KANSL2Q9H9L4 492 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 ZCCHC17Q9NP64 241 aaKnown RBP6.47□□□□□ -1.37
LRRC49-223ENST00000560369 ABHD10Q9NUJ1 306 aa6.47□□□□□ -1.37
LRRC49-223ENST00000560369 CCDC66A2RUB6 948 aa6.46□□□□□ -1.38
LRRC49-223ENST00000560369 RCCD1A6NED2 376 aa6.46□□□□□ -1.38
LRRC49-223ENST00000560369 TTLL1O95922 423 aa6.46□□□□□ -1.38
LRRC49-223ENST00000560369 EEF2P13639 858 aaKnown RBP6.46□□□□□ -1.38
LRRC49-223ENST00000560369 NPR1P16066 1061 aa6.46□□□□□ -1.38
LRRC49-223ENST00000560369 CASQ1P31415 396 aa6.46□□□□□ -1.38
LRRC49-223ENST00000560369 KRT9P35527 623 aa6.46□□□□□ -1.38
LRRC49-223ENST00000560369 TXLNAP40222 546 aa6.46□□□□□ -1.38
LRRC49-223ENST00000560369 ARHGAP25P42331 645 aa6.46□□□□□ -1.38
LRRC49-223ENST00000560369 ADCY7P51828 1080 aa6.46□□□□□ -1.38
LRRC49-223ENST00000560369 MAP3K9P80192 1104 aa6.46□□□□□ -1.38
LRRC49-223ENST00000560369 APBA1Q02410 837 aa6.46□□□□□ -1.38
LRRC49-223ENST00000560369 BMS1Q14692 1282 aaKnown RBP6.46□□□□□ -1.38
LRRC49-223ENST00000560369 CALCRLQ16602 461 aa6.46□□□□□ -1.38
LRRC49-223ENST00000560369 AOC3Q16853 763 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms