RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 PDCD7Q8N8D1 485 aaKnown RBP12.39□□□□□ -0.43
APH1B-208ENST00000560353 FAM133AQ8N9E0 248 aa12.39□□□□□ -0.43
APH1B-208ENST00000560353 EDAQ92838 391 aa12.39□□□□□ -0.43
APH1B-208ENST00000560353 MRPL38Q96DV4 380 aaKnown RBP12.39□□□□□ -0.43
APH1B-208ENST00000560353 CRBNQ96SW2 442 aa12.39□□□□□ -0.43
APH1B-208ENST00000560353 POP1Q99575 1024 aaKnown RBP12.39□□□□□ -0.43
APH1B-208ENST00000560353 WDR87Q6ZQQ6 2873 aa12.39□□□□□ -0.43
APH1B-208ENST00000560353 PNMA6EA0A0J9YXQ4 647 aa12.38□□□□□ -0.43
APH1B-208ENST00000560353 LINC01553A4QN01 128 aa12.38□□□□□ -0.43
APH1B-208ENST00000560353 E9PSI1 815 aa12.38□□□□□ -0.43
APH1B-208ENST00000560353 GJB5O95377 273 aa12.38□□□□□ -0.43
APH1B-208ENST00000560353 GNAI2P04899 355 aa12.38□□□□□ -0.43
APH1B-208ENST00000560353 CDK8P49336 464 aa12.38□□□□□ -0.43
APH1B-208ENST00000560353 OAZ1P54368 228 aa12.38□□□□□ -0.43
APH1B-208ENST00000560353 TCF15Q12870 199 aa12.38□□□□□ -0.43
APH1B-208ENST00000560353 TIGD5Q53EQ6 642 aa12.38□□□□□ -0.43
APH1B-208ENST00000560353 SUGP1Q8IWZ8 645 aaKnown RBP12.38□□□□□ -0.43
APH1B-208ENST00000560353 PBXIP1Q96AQ6 731 aa12.38□□□□□ -0.43
APH1B-208ENST00000560353 PABPC5Q96DU9 382 aaKnown RBP12.38□□□□□ -0.43
APH1B-208ENST00000560353 NUP88Q99567 741 aaPredicted RBP12.38□□□□□ -0.43
APH1B-208ENST00000560353 MTG1Q9BT17 334 aaPredicted RBP12.38□□□□□ -0.43
APH1B-208ENST00000560353 SLC38A10Q9HBR0 1119 aa12.38□□□□□ -0.43
APH1B-208ENST00000560353 RAVER2Q9HCJ3 691 aaKnown RBP12.38□□□□□ -0.43
APH1B-208ENST00000560353 GPHNQ9NQX3 736 aaPredicted RBP12.38□□□□□ -0.43
APH1B-208ENST00000560353 MUTYHQ9UIF7 546 aa12.38□□□□□ -0.43
APH1B-208ENST00000560353 DBNLQ9UJU6 430 aaKnown RBP12.38□□□□□ -0.43
APH1B-208ENST00000560353 PURAQ00577 322 aaKnown RBP12.37□□□□□ -0.43
APH1B-208ENST00000560353 COL19A1Q14993 1142 aa12.37□□□□□ -0.43
APH1B-208ENST00000560353 FAM47CQ5HY64 1035 aa12.37□□□□□ -0.43
APH1B-208ENST00000560353 TAPT1Q6NXT6 567 aa12.37□□□□□ -0.43
APH1B-208ENST00000560353 NFRKBQ6P4R8 1299 aa12.37□□□□□ -0.43
APH1B-208ENST00000560353 EP400NLQ6ZTU2 488 aa12.37□□□□□ -0.43
APH1B-208ENST00000560353 TMCO2Q7Z6W1 182 aaPredicted RBP12.37□□□□□ -0.43
APH1B-208ENST00000560353 AMOTL1Q8IY63 956 aa12.37□□□□□ -0.43
APH1B-208ENST00000560353 FBXO22Q8NEZ5 403 aa12.37□□□□□ -0.43
APH1B-208ENST00000560353 SDR42E1Q8WUS8 393 aa12.37□□□□□ -0.43
APH1B-208ENST00000560353 ANTXR1Q9H6X2 564 aa12.37□□□□□ -0.43
APH1B-208ENST00000560353 PDGFCQ9NRA1 345 aa12.37□□□□□ -0.43
APH1B-208ENST00000560353 RYDENQ9NUL5 291 aaKnown RBP12.37□□□□□ -0.43
APH1B-208ENST00000560353 MYO5AQ9Y4I1 1855 aaKnown RBP12.37□□□□□ -0.43
APH1B-208ENST00000560353 ABHD14A-ACY1A0A1B0GW23 586 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 SOWAHBA6NEL2 793 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 TMEM221A6NGB7 291 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 F5H6K3 240 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 M0R296 226 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 NCK2O43639 380 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 PTGS1P23219 599 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 CPT1AP50416 773 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 PTPN11Q06124 597 aaPredicted RBP12.36□□□□□ -0.43
APH1B-208ENST00000560353 KLRC3Q07444 240 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 NBPF20Q3BBV1 942 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 SLC9C2Q5TAH2 1124 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 TRIM67Q6ZTA4 783 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 RNF135Q8IUD6 432 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 HS6ST3Q8IZP7 471 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 CCDC155Q8N6L0 562 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 BANK1Q8NDB2 785 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 KIFC2Q96AC6 838 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 HOMER2Q9NSB8 354 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 ATP8A2Q9NTI2 1148 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 NOD1Q9Y239 953 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 COG6Q9Y2V7 657 aa12.36□□□□□ -0.43
APH1B-208ENST00000560353 PTPRZ1P23471 2315 aaPredicted RBP12.36□□□□□ -0.43
APH1B-208ENST00000560353 SCN5AQ14524 2016 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 KPNA6O60684 536 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 EFCAB14O75071 495 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 PARNO95453 639 aaKnown RBP12.35□□□□□ -0.43
APH1B-208ENST00000560353 MYL3P08590 195 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 PDE6AP16499 860 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 DEFB103AP81534 67 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 TTF1Q15361 905 aaPredicted RBP12.35□□□□□ -0.43
APH1B-208ENST00000560353 SMAD2Q15796 467 aaKnown RBP12.35□□□□□ -0.43
APH1B-208ENST00000560353 DUSP28Q4G0W2 176 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 BRDTQ58F21 947 aaPredicted RBP12.35□□□□□ -0.43
APH1B-208ENST00000560353 C12orf60Q5U649 245 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 CNKSR3Q6P9H4 555 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 KIAA1211Q6ZU35 1233 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 C16orf86Q6ZW13 317 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 AFAP1L1Q8TED9 768 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 ATOH1Q92858 354 aaPredicted RBP12.35□□□□□ -0.43
APH1B-208ENST00000560353 CCDC8Q9H0W5 538 aaPredicted RBP12.35□□□□□ -0.43
APH1B-208ENST00000560353 ACAD9Q9H845 621 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 VTA1Q9NP79 307 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 TLR7Q9NYK1 1049 aaKnown RBP12.35□□□□□ -0.43
APH1B-208ENST00000560353 FEM1BQ9UK73 627 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 BOLA1Q9Y3E2 137 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 INSL6Q9Y581 213 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 MCM3APO60318 1980 aa12.35□□□□□ -0.43
APH1B-208ENST00000560353 NAV1Q8NEY1 1877 aa12.34□□□□□ -0.43
APH1B-208ENST00000560353 NDUFB10O96000 172 aa12.34□□□□□ -0.43
APH1B-208ENST00000560353 FDX1P10109 184 aa12.34□□□□□ -0.43
APH1B-208ENST00000560353 TMEM63BQ5T3F8 832 aa12.34□□□□□ -0.43
APH1B-208ENST00000560353 EEPD1Q7L9B9 569 aa12.34□□□□□ -0.43
APH1B-208ENST00000560353 FBXO16Q8IX29 292 aaPredicted RBP12.34□□□□□ -0.43
APH1B-208ENST00000560353 LCORLQ8N3X6 602 aa12.34□□□□□ -0.43
APH1B-208ENST00000560353 FBXL6Q8N531 539 aa12.34□□□□□ -0.43
APH1B-208ENST00000560353 CAGE1Q8TC20 777 aa12.34□□□□□ -0.43
APH1B-208ENST00000560353 SAMD11Q96NU1 681 aa12.34□□□□□ -0.43
APH1B-208ENST00000560353 C17orf80Q9BSJ5 609 aa12.34□□□□□ -0.43
APH1B-208ENST00000560353 A1CFQ9NQ94 594 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms