RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 WNT10BO00744 389 aa15.88■□□□□ 0.13
CARMIL3-203ENST00000560349 GTPBP6O43824 516 aaPredicted RBP15.88■□□□□ 0.13
CARMIL3-203ENST00000560349 HOXA13P31271 388 aaPredicted RBP15.88■□□□□ 0.13
CARMIL3-203ENST00000560349 RASSF7Q02833 373 aa15.88■□□□□ 0.13
CARMIL3-203ENST00000560349 DALRD3Q5D0E6 543 aaKnown RBP15.88■□□□□ 0.13
CARMIL3-203ENST00000560349 ENOX1Q8TC92 643 aaKnown RBP15.88■□□□□ 0.13
CARMIL3-203ENST00000560349 MKL1Q969V6 931 aa15.88■□□□□ 0.13
CARMIL3-203ENST00000560349 MMTAG2Q9BU76 263 aaKnown RBP15.88■□□□□ 0.13
CARMIL3-203ENST00000560349 DACH1Q9UI36 760 aa15.88■□□□□ 0.13
CARMIL3-203ENST00000560349 TRIM49BA6NDI0 452 aa15.88■□□□□ 0.13
CARMIL3-203ENST00000560349 ZNF18P17022 549 aa15.88■□□□□ 0.13
CARMIL3-203ENST00000560349 DGKZQ13574 1117 aa15.88■□□□□ 0.13
CARMIL3-203ENST00000560349 SPDYE2Q495Y8 402 aa15.88■□□□□ 0.13
CARMIL3-203ENST00000560349 PCNTO95613 3336 aa15.88■□□□□ 0.13
CARMIL3-203ENST00000560349 NFKBIEO00221 500 aa15.87■□□□□ 0.13
CARMIL3-203ENST00000560349 DCAF4Q8WV16 495 aa15.87■□□□□ 0.13
CARMIL3-203ENST00000560349 MTMR8Q96EF0 704 aa15.87■□□□□ 0.13
CARMIL3-203ENST00000560349 TAOK3Q9H2K8 898 aa15.87■□□□□ 0.13
CARMIL3-203ENST00000560349 TEX33O43247 280 aa15.87■□□□□ 0.13
CARMIL3-203ENST00000560349 CCT6AP40227 531 aaKnown RBP15.87■□□□□ 0.13
CARMIL3-203ENST00000560349 FAM83BQ5T0W9 1011 aa15.87■□□□□ 0.13
CARMIL3-203ENST00000560349 SLC16A10Q8TF71 515 aa15.87■□□□□ 0.13
CARMIL3-203ENST00000560349 DDX25Q9UHL0 483 aaKnown RBP15.87■□□□□ 0.13
CARMIL3-203ENST00000560349 BMP3P12645 472 aa15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 SFPQP23246 707 aaKnown RBP eCLIP15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 PRPHP41219 470 aa15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 PRCPP42785 496 aa15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 CLK2P49760 499 aaKnown RBP15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 KMT5BQ4FZB7 885 aa15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 FBXO41Q8TF61 875 aa15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 FAM151AQ8WW52 585 aa15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 ZFP91Q96JP5 570 aaPredicted RBP15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 MTMR9Q96QG7 549 aa15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 LRWD1Q9UFC0 647 aa15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 hCG_1984214I3L0E3 225 aa15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 LAD1O00515 517 aa15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 MARCH6O60337 910 aa15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 NPM3O75607 178 aaKnown RBP15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 MRPL12P52815 198 aaKnown RBP15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 TPD52L1Q16890 204 aaPredicted RBP15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 SYDE2Q5VT97 1194 aa15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 ZNF713Q8N859 430 aaPredicted RBP15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 JDP2Q8WYK2 163 aa15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 ZBTB21Q9ULJ3 1066 aa15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 GJA3Q9Y6H8 435 aa15.86■□□□□ 0.13
CARMIL3-203ENST00000560349 PMS1P54277 932 aaKnown RBP15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 CCDC174Q6PII3 467 aa15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 SLC30A10Q6XR72 485 aa15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 SAMD7Q7Z3H4 446 aa15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 CCSER1Q9C0I3 900 aa15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 FBXO28Q9NVF7 368 aa15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 FZD1Q9UP38 647 aa15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 MYH7BA7E2Y1 1941 aa15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 CTIFO43310 598 aaKnown RBP15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 POLD1P28340 1107 aa15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 CIAPIN1Q6FI81 312 aa15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 KCNK18Q7Z418 384 aa15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 VSTM4Q8IW00 320 aa15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 IGSF22Q8N9C0 903 aa15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 NELFBQ8WX92 580 aa15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 HAS1Q92839 578 aa15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 KIFC2Q96AC6 838 aa15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 MYOZ2Q9NPC6 264 aa15.85■□□□□ 0.13
CARMIL3-203ENST00000560349 MEIS2O14770 477 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 ERCC5P28715 1186 aaPredicted RBP15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 STAT3P40763 770 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 ADKP55263 362 aaKnown RBP15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 ASIC1P78348 528 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 MCM6Q14566 821 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 ECM1Q16610 540 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 TBC1D10BQ4KMP7 808 aaPredicted RBP15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 DYMQ7RTS9 669 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 TBC1D5Q92609 795 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 ANO3Q9BYT9 981 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 HERC5Q9UII4 1024 aaKnown RBP15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 PRR12Q9ULL5 1215 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 KLRC4O43908 158 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 FCER1AP12319 257 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 GRB10Q13322 594 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 PRAMEF18Q5VWM3 479 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 SPATA1Q5VX52 437 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 FCHSD1Q86WN1 690 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 FBXO11Q86XK2 927 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 GMCL1P1Q8NEA9 526 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 SNX29Q8TEQ0 813 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 ZNF592Q92610 1267 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 KBTBD4Q9NVX7 518 aa15.84■□□□□ 0.13
CARMIL3-203ENST00000560349 CBFA2T2O43439 604 aa15.83■□□□□ 0.13
CARMIL3-203ENST00000560349 PRELPP51888 382 aa15.83■□□□□ 0.13
CARMIL3-203ENST00000560349 UBXN2AP68543 259 aa15.83■□□□□ 0.13
CARMIL3-203ENST00000560349 PPP4R3BQ5MIZ7 849 aa15.83■□□□□ 0.13
CARMIL3-203ENST00000560349 ZNF658Q5TYW1 1059 aaPredicted RBP15.83■□□□□ 0.13
CARMIL3-203ENST00000560349 PPP1R18Q6NYC8 613 aa15.83■□□□□ 0.13
CARMIL3-203ENST00000560349 AMNQ9BXJ7 453 aa15.83■□□□□ 0.13
CARMIL3-203ENST00000560349 OPLAHO14841 1288 aa15.83■□□□□ 0.12
CARMIL3-203ENST00000560349 GSDMDP57764 484 aa15.83■□□□□ 0.12
CARMIL3-203ENST00000560349 PAK1Q13153 545 aa15.83■□□□□ 0.12
CARMIL3-203ENST00000560349 RASA3Q14644 834 aa15.83■□□□□ 0.12
CARMIL3-203ENST00000560349 APTXQ7Z2E3 356 aaKnown RBP15.83■□□□□ 0.12
CARMIL3-203ENST00000560349 CPLX3Q8WVH0 158 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms