RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 ANKRD33Q7Z3H0 272 aa20.76■□□□□ 0.91
HDDC3-205ENST00000559898 PPP1R13LQ8WUF5 828 aa20.76■□□□□ 0.91
HDDC3-205ENST00000559898 JMJD4Q9H9V9 463 aa20.76■□□□□ 0.91
HDDC3-205ENST00000559898 COL6A3P12111 3177 aa20.76■□□□□ 0.91
HDDC3-205ENST00000559898 WDR19Q8NEZ3 1342 aa20.76■□□□□ 0.91
HDDC3-205ENST00000559898 KIAA0355O15063 1070 aa20.75■□□□□ 0.91
HDDC3-205ENST00000559898 PPP1R11O60927 126 aaPredicted RBP20.75■□□□□ 0.91
HDDC3-205ENST00000559898 PSMC6P62333 389 aa20.75■□□□□ 0.91
HDDC3-205ENST00000559898 NUP133Q8WUM0 1156 aa20.75■□□□□ 0.91
HDDC3-205ENST00000559898 COPS5Q92905 334 aa20.75■□□□□ 0.91
HDDC3-205ENST00000559898 VTI1AQ96AJ9 217 aa20.75■□□□□ 0.91
HDDC3-205ENST00000559898 TMEM39AQ9NV64 488 aa20.75■□□□□ 0.91
HDDC3-205ENST00000559898 BAZ2BQ9UIF8 2168 aaKnown RBP20.75■□□□□ 0.91
HDDC3-205ENST00000559898 E7EWF7 191 aa20.74■□□□□ 0.91
HDDC3-205ENST00000559898 ANTXR2P58335 489 aa20.74■□□□□ 0.91
HDDC3-205ENST00000559898 FSCN1Q16658 493 aaKnown RBP20.74■□□□□ 0.91
HDDC3-205ENST00000559898 IFIT1BQ5T764 474 aaKnown RBP20.74■□□□□ 0.91
HDDC3-205ENST00000559898 DEFB123Q8N688 67 aa20.74■□□□□ 0.91
HDDC3-205ENST00000559898 PCSK9Q8NBP7 692 aaKnown RBP20.74■□□□□ 0.91
HDDC3-205ENST00000559898 GLT1D1Q96MS3 346 aa20.74■□□□□ 0.91
HDDC3-205ENST00000559898 TAAR1Q96RJ0 339 aa20.74■□□□□ 0.91
HDDC3-205ENST00000559898 UBAC1Q9BSL1 405 aa20.74■□□□□ 0.91
HDDC3-205ENST00000559898 VTA1Q9NP79 307 aa20.74■□□□□ 0.91
HDDC3-205ENST00000559898 GPHNQ9NQX3 736 aaPredicted RBP20.74■□□□□ 0.91
HDDC3-205ENST00000559898 MAD2L2Q9UI95 211 aa20.74■□□□□ 0.91
HDDC3-205ENST00000559898 ARVCFO00192 962 aa20.73■□□□□ 0.91
HDDC3-205ENST00000559898 OPLAHO14841 1288 aa20.73■□□□□ 0.91
HDDC3-205ENST00000559898 PARP1P09874 1014 aaKnown RBP20.73■□□□□ 0.91
HDDC3-205ENST00000559898 ASPRV1Q53RT3 343 aa20.73■□□□□ 0.91
HDDC3-205ENST00000559898 CCDC178Q5BJE1 867 aa20.73■□□□□ 0.91
HDDC3-205ENST00000559898 IQSEC1Q6DN90 963 aa20.73■□□□□ 0.91
HDDC3-205ENST00000559898 CNNM2Q9H8M5 875 aa20.73■□□□□ 0.91
HDDC3-205ENST00000559898 SPC25Q9HBM1 224 aa20.73■□□□□ 0.91
HDDC3-205ENST00000559898 TBX21Q9UL17 535 aa20.73■□□□□ 0.91
HDDC3-205ENST00000559898 ELP1O95163 1332 aa20.73■□□□□ 0.91
HDDC3-205ENST00000559898 A0A0U1RQG5 324 aaPredicted RBP20.72■□□□□ 0.91
HDDC3-205ENST00000559898 ARIH2O95376 493 aa20.72■□□□□ 0.91
HDDC3-205ENST00000559898 RAG1P15918 1043 aa20.72■□□□□ 0.91
HDDC3-205ENST00000559898 EDNRBP24530 442 aa20.72■□□□□ 0.91
HDDC3-205ENST00000559898 FAM126BQ8IXS8 530 aa20.72■□□□□ 0.91
HDDC3-205ENST00000559898 FAM161BQ96MY7 647 aa20.72■□□□□ 0.91
HDDC3-205ENST00000559898 TOX2Q96NM4 488 aa20.72■□□□□ 0.91
HDDC3-205ENST00000559898 WDR11Q9BZH6 1224 aa20.72■□□□□ 0.91
HDDC3-205ENST00000559898 RBM8AQ9Y5S9 174 aaKnown RBP20.72■□□□□ 0.91
HDDC3-205ENST00000559898 UMODL1Q5DID0 1318 aa20.72■□□□□ 0.91
HDDC3-205ENST00000559898 RBM47A0AV96 593 aaKnown RBP20.71■□□□□ 0.91
HDDC3-205ENST00000559898 DHX16O60231 1041 aaKnown RBP20.71■□□□□ 0.91
HDDC3-205ENST00000559898 DUSP28Q4G0W2 176 aa20.71■□□□□ 0.91
HDDC3-205ENST00000559898 SYTL5Q8TDW5 730 aaPredicted RBP20.71■□□□□ 0.91
HDDC3-205ENST00000559898 RUFY2Q8WXA3 655 aa20.71■□□□□ 0.91
HDDC3-205ENST00000559898 MAP4K1Q92918 833 aa20.71■□□□□ 0.91
HDDC3-205ENST00000559898 PPP1R12CQ9BZL4 782 aa20.71■□□□□ 0.91
HDDC3-205ENST00000559898 AP5M1Q9H0R1 490 aa20.71■□□□□ 0.91
HDDC3-205ENST00000559898 MTMR10Q9NXD2 777 aa20.71■□□□□ 0.91
HDDC3-205ENST00000559898 ADD3Q9UEY8 706 aaKnown RBP20.71■□□□□ 0.91
HDDC3-205ENST00000559898 U3KPZ7 1027 aaPredicted RBP20.71■□□□□ 0.91
HDDC3-205ENST00000559898 KIAA1217Q5T5P2 1943 aa20.7■□□□□ 0.91
HDDC3-205ENST00000559898 PALM3A6NDB9 673 aaPredicted RBP20.7■□□□□ 0.9
HDDC3-205ENST00000559898 DCDC2CA8MYV0 355 aa20.7■□□□□ 0.9
HDDC3-205ENST00000559898 CD4P01730 458 aa20.7■□□□□ 0.9
HDDC3-205ENST00000559898 C16orf59Q7L2K0 433 aa20.7■□□□□ 0.9
HDDC3-205ENST00000559898 SLC43A3Q8NBI5 491 aa20.7■□□□□ 0.9
HDDC3-205ENST00000559898 LSG1Q9H089 658 aaKnown RBP20.7■□□□□ 0.9
HDDC3-205ENST00000559898 KLRF2D3W0D1 207 aa20.69■□□□□ 0.9
HDDC3-205ENST00000559898 IFIT3O14879 490 aaKnown RBP20.69■□□□□ 0.9
HDDC3-205ENST00000559898 CYTH3O43739 400 aa20.69■□□□□ 0.9
HDDC3-205ENST00000559898 PDE4DQ08499 809 aa20.69■□□□□ 0.9
HDDC3-205ENST00000559898 FBXO11Q86XK2 927 aa20.69■□□□□ 0.9
HDDC3-205ENST00000559898 MB21D2Q8IYB1 491 aaPredicted RBP20.69■□□□□ 0.9
HDDC3-205ENST00000559898 MTMR8Q96EF0 704 aa20.69■□□□□ 0.9
HDDC3-205ENST00000559898 TRPV6Q9H1D0 765 aa20.69■□□□□ 0.9
HDDC3-205ENST00000559898 ABCB11O95342 1321 aa20.69■□□□□ 0.9
HDDC3-205ENST00000559898 TIMP1P01033 207 aa20.68■□□□□ 0.9
HDDC3-205ENST00000559898 CYP2C18P33260 490 aa20.68■□□□□ 0.9
HDDC3-205ENST00000559898 NT5C2P49902 561 aa20.68■□□□□ 0.9
HDDC3-205ENST00000559898 ITGA7Q13683 1181 aa20.68■□□□□ 0.9
HDDC3-205ENST00000559898 GRM4Q14833 912 aa20.68■□□□□ 0.9
HDDC3-205ENST00000559898 FAM109BQ6ICB4 259 aaPredicted RBP20.68■□□□□ 0.9
HDDC3-205ENST00000559898 OR6J1Q8NGC5 347 aa20.68■□□□□ 0.9
HDDC3-205ENST00000559898 IGDCC4Q8TDY8 1250 aa20.68■□□□□ 0.9
HDDC3-205ENST00000559898 PIGSQ96S52 555 aa20.68■□□□□ 0.9
HDDC3-205ENST00000559898 MYL10Q9BUA6 226 aa20.68■□□□□ 0.9
HDDC3-205ENST00000559898 Q9Y3F1 56 aa20.68■□□□□ 0.9
HDDC3-205ENST00000559898 B4GALT4O60513 344 aa20.67■□□□□ 0.9
HDDC3-205ENST00000559898 ACRP10323 421 aa20.67■□□□□ 0.9
HDDC3-205ENST00000559898 FPGSQ05932 587 aa20.67■□□□□ 0.9
HDDC3-205ENST00000559898 GPR153Q6NV75 609 aa20.67■□□□□ 0.9
HDDC3-205ENST00000559898 HOMER1Q86YM7 354 aa20.67■□□□□ 0.9
HDDC3-205ENST00000559898 RGS22Q8NE09 1264 aa20.67■□□□□ 0.9
HDDC3-205ENST00000559898 DNERQ8NFT8 737 aa20.67■□□□□ 0.9
HDDC3-205ENST00000559898 ZFP91Q96JP5 570 aaPredicted RBP20.67■□□□□ 0.9
HDDC3-205ENST00000559898 GUCD1Q96NT3 240 aa20.67■□□□□ 0.9
HDDC3-205ENST00000559898 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.67■□□□□ 0.9
HDDC3-205ENST00000559898 MYL3P08590 195 aa20.66■□□□□ 0.9
HDDC3-205ENST00000559898 CSF2RAP15509 400 aa20.66■□□□□ 0.9
HDDC3-205ENST00000559898 TROAPQ12815 778 aa20.66■□□□□ 0.9
HDDC3-205ENST00000559898 TRDNQ13061 729 aa20.66■□□□□ 0.9
HDDC3-205ENST00000559898 NCOA7Q8NI08 942 aa20.66■□□□□ 0.9
HDDC3-205ENST00000559898 PIBF1Q8WXW3 757 aa20.66■□□□□ 0.9
HDDC3-205ENST00000559898 ESYT1Q9BSJ8 1104 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms