RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 ZKSCAN3Q9BRR0 538 aa22.12■■□□□ 1.13
CDC42BPB-206ENST00000559790 VTA1Q9NP79 307 aa22.12■■□□□ 1.13
CDC42BPB-206ENST00000559790 EDNRBP24530 442 aa22.11■■□□□ 1.13
CDC42BPB-206ENST00000559790 PDE4AP27815 886 aa22.11■■□□□ 1.13
CDC42BPB-206ENST00000559790 MFSD6Q6ZSS7 791 aa22.11■■□□□ 1.13
CDC42BPB-206ENST00000559790 TTC14Q96N46 770 aa22.11■■□□□ 1.13
CDC42BPB-206ENST00000559790 RWDD1Q9H446 243 aaPredicted RBP22.11■■□□□ 1.13
CDC42BPB-206ENST00000559790 TRANK1O15050 2925 aa22.11■■□□□ 1.13
CDC42BPB-206ENST00000559790 DOCK5Q9H7D0 1870 aa22.11■■□□□ 1.13
CDC42BPB-206ENST00000559790 RBM47A0AV96 593 aaKnown RBP22.1■■□□□ 1.13
CDC42BPB-206ENST00000559790 CSF2RAP15509 400 aa22.1■■□□□ 1.13
CDC42BPB-206ENST00000559790 TMEM240Q5SV17 173 aa22.1■■□□□ 1.13
CDC42BPB-206ENST00000559790 CWC27Q6UX04 472 aaKnown RBP22.1■■□□□ 1.13
CDC42BPB-206ENST00000559790 TTC28Q96AY4 2481 aa22.1■■□□□ 1.13
CDC42BPB-206ENST00000559790 SPC25Q9HBM1 224 aa22.1■■□□□ 1.13
CDC42BPB-206ENST00000559790 DLL1O00548 723 aa22.09■■□□□ 1.13
CDC42BPB-206ENST00000559790 GOLGA8HP0CJ92 632 aa22.09■■□□□ 1.13
CDC42BPB-206ENST00000559790 GSPT1P15170 499 aaKnown RBP22.09■■□□□ 1.13
CDC42BPB-206ENST00000559790 PSMC6P62333 389 aa22.09■■□□□ 1.13
CDC42BPB-206ENST00000559790 DUSP28Q4G0W2 176 aa22.09■■□□□ 1.13
CDC42BPB-206ENST00000559790 IQSEC1Q6DN90 963 aa22.09■■□□□ 1.13
CDC42BPB-206ENST00000559790 MYLIPQ8WY64 445 aa22.09■■□□□ 1.13
CDC42BPB-206ENST00000559790 PPP1R12CQ9BZL4 782 aa22.09■■□□□ 1.13
CDC42BPB-206ENST00000559790 Q9Y3F1 56 aa22.09■■□□□ 1.13
CDC42BPB-206ENST00000559790 DYNC1LI2O43237 492 aaPredicted RBP22.08■■□□□ 1.13
CDC42BPB-206ENST00000559790 KDM4AO75164 1064 aa22.08■■□□□ 1.13
CDC42BPB-206ENST00000559790 CYP2C18P33260 490 aa22.08■■□□□ 1.13
CDC42BPB-206ENST00000559790 RPS6P62753 249 aaKnown RBP22.08■■□□□ 1.13
CDC42BPB-206ENST00000559790 ENAHQ8N8S7 591 aaPredicted RBP22.08■■□□□ 1.13
CDC42BPB-206ENST00000559790 ANKS1AQ92625 1134 aa22.08■■□□□ 1.13
CDC42BPB-206ENST00000559790 WNT8AQ9H1J5 351 aa22.08■■□□□ 1.13
CDC42BPB-206ENST00000559790 LOC102724159A0A0B4J2E5 919 aa22.07■■□□□ 1.12
CDC42BPB-206ENST00000559790 B4E1Z4 1266 aa22.07■■□□□ 1.12
CDC42BPB-206ENST00000559790 B4GALT4O60513 344 aa22.07■■□□□ 1.12
CDC42BPB-206ENST00000559790 DNAJB2P25686 324 aa22.07■■□□□ 1.12
CDC42BPB-206ENST00000559790 ITGA7Q13683 1181 aa22.07■■□□□ 1.12
CDC42BPB-206ENST00000559790 PWP2Q15269 919 aaKnown RBP22.07■■□□□ 1.12
CDC42BPB-206ENST00000559790 DGKHQ86XP1 1220 aa22.07■■□□□ 1.12
CDC42BPB-206ENST00000559790 ESR2Q92731 530 aa22.07■■□□□ 1.12
CDC42BPB-206ENST00000559790 DSCC1Q9BVC3 393 aa22.07■■□□□ 1.12
CDC42BPB-206ENST00000559790 NOC4LQ9BVI4 516 aaKnown RBP22.07■■□□□ 1.12
CDC42BPB-206ENST00000559790 COL20A1Q9P218 1284 aa22.07■■□□□ 1.12
CDC42BPB-206ENST00000559790 TMEM265A0A087WTH1 108 aa22.06■■□□□ 1.12
CDC42BPB-206ENST00000559790 PTPDC1A2A3K4 754 aa22.06■■□□□ 1.12
CDC42BPB-206ENST00000559790 ACRP10323 421 aa22.06■■□□□ 1.12
CDC42BPB-206ENST00000559790 NOL8Q76FK4 1167 aaKnown RBP22.06■■□□□ 1.12
CDC42BPB-206ENST00000559790 PNMA1Q8ND90 353 aa22.06■■□□□ 1.12
CDC42BPB-206ENST00000559790 TBC1D5Q92609 795 aa22.06■■□□□ 1.12
CDC42BPB-206ENST00000559790 UBA5Q9GZZ9 404 aa22.06■■□□□ 1.12
CDC42BPB-206ENST00000559790 TRPV6Q9H1D0 765 aa22.06■■□□□ 1.12
CDC42BPB-206ENST00000559790 RNF41Q9H4P4 317 aaPredicted RBP22.06■■□□□ 1.12
CDC42BPB-206ENST00000559790 GRXCR1A8MXD5 290 aa22.05■■□□□ 1.12
CDC42BPB-206ENST00000559790 CABYRO75952 493 aa22.05■■□□□ 1.12
CDC42BPB-206ENST00000559790 ARIH2O95376 493 aa22.05■■□□□ 1.12
CDC42BPB-206ENST00000559790 CALML3P27482 149 aa22.05■■□□□ 1.12
CDC42BPB-206ENST00000559790 PBX2P40425 430 aa22.05■■□□□ 1.12
CDC42BPB-206ENST00000559790 PURAQ00577 322 aaKnown RBP22.05■■□□□ 1.12
CDC42BPB-206ENST00000559790 PPIGQ13427 754 aaKnown RBP eCLIP22.05■■□□□ 1.122e-12■■□□□ 12.4
CDC42BPB-206ENST00000559790 SLC35G1Q2M3R5 365 aa22.05■■□□□ 1.12
CDC42BPB-206ENST00000559790 GPATCH4Q5T3I0 446 aaKnown RBP22.05■■□□□ 1.12
CDC42BPB-206ENST00000559790 RNF207Q6ZRF8 634 aa22.05■■□□□ 1.12
CDC42BPB-206ENST00000559790 KIAA1211Q6ZU35 1233 aa22.05■■□□□ 1.12
CDC42BPB-206ENST00000559790 DIAPH3Q9NSV4 1193 aa22.05■■□□□ 1.12
CDC42BPB-206ENST00000559790 CXXC1Q9P0U4 656 aaPredicted RBP22.05■■□□□ 1.12
CDC42BPB-206ENST00000559790 ADD3Q9UEY8 706 aaKnown RBP22.05■■□□□ 1.12
CDC42BPB-206ENST00000559790 ZNF213O14771 459 aa22.04■■□□□ 1.12
CDC42BPB-206ENST00000559790 OPLAHO14841 1288 aa22.04■■□□□ 1.12
CDC42BPB-206ENST00000559790 MFAP1P55081 439 aaKnown RBP22.04■■□□□ 1.12
CDC42BPB-206ENST00000559790 ZNF365Q70YC5 407 aa22.04■■□□□ 1.12
CDC42BPB-206ENST00000559790 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.04■■□□□ 1.12
CDC42BPB-206ENST00000559790 COPS5Q92905 334 aa22.04■■□□□ 1.12
CDC42BPB-206ENST00000559790 VTI1AQ96AJ9 217 aa22.04■■□□□ 1.12
CDC42BPB-206ENST00000559790 WDR11Q9BZH6 1224 aa22.04■■□□□ 1.12
CDC42BPB-206ENST00000559790 AP5M1Q9H0R1 490 aa22.04■■□□□ 1.12
CDC42BPB-206ENST00000559790 ZSWIM5Q9P217 1185 aa22.04■■□□□ 1.12
CDC42BPB-206ENST00000559790 TNKSO95271 1327 aa22.04■■□□□ 1.12
CDC42BPB-206ENST00000559790 GRIN2CQ14957 1233 aa22.03■■□□□ 1.12
CDC42BPB-206ENST00000559790 SEC23AQ15436 765 aa22.03■■□□□ 1.12
CDC42BPB-206ENST00000559790 CDC37Q16543 378 aaPredicted RBP22.03■■□□□ 1.12
CDC42BPB-206ENST00000559790 USH1GQ495M9 461 aa22.03■■□□□ 1.12
CDC42BPB-206ENST00000559790 MAFAQ8NHW3 353 aaPredicted RBP22.03■■□□□ 1.12
CDC42BPB-206ENST00000559790 ZSCAN10Q96SZ4 725 aaPredicted RBP22.03■■□□□ 1.12
CDC42BPB-206ENST00000559790 ALDH8A1Q9H2A2 487 aaPredicted RBP22.03■■□□□ 1.12
CDC42BPB-206ENST00000559790 HIPK3Q9H422 1215 aa22.03■■□□□ 1.12
CDC42BPB-206ENST00000559790 TAF6LQ9Y6J9 622 aa22.03■■□□□ 1.12
CDC42BPB-206ENST00000559790 COL4A4P53420 1690 aaPredicted RBP22.02■■□□□ 1.12
CDC42BPB-206ENST00000559790 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.02■■□□□ 1.12
CDC42BPB-206ENST00000559790 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.02■■□□□ 1.12
CDC42BPB-206ENST00000559790 TLR3O15455 904 aaKnown RBP22.02■■□□□ 1.12
CDC42BPB-206ENST00000559790 ADGRF4Q8IZF3 695 aa22.02■■□□□ 1.12
CDC42BPB-206ENST00000559790 USP38Q8NB14 1042 aa22.02■■□□□ 1.12
CDC42BPB-206ENST00000559790 PPP1R13LQ8WUF5 828 aa22.02■■□□□ 1.12
CDC42BPB-206ENST00000559790 COL25A1Q9BXS0 654 aaPredicted RBP22.02■■□□□ 1.12
CDC42BPB-206ENST00000559790 PBX4Q9BYU1 374 aa22.02■■□□□ 1.12
CDC42BPB-206ENST00000559790 IL23AQ9NPF7 189 aa22.02■■□□□ 1.12
CDC42BPB-206ENST00000559790 QRICH1Q2TAL8 776 aa22.01■■□□□ 1.11
CDC42BPB-206ENST00000559790 TTC22Q5TAA0 569 aa22.01■■□□□ 1.11
CDC42BPB-206ENST00000559790 CCDC62Q6P9F0 684 aa22.01■■□□□ 1.11
CDC42BPB-206ENST00000559790 CYB5R4Q7L1T6 521 aa22.01■■□□□ 1.11
CDC42BPB-206ENST00000559790 TMEM199Q8N511 208 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms