RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 SEMA6BQ9H3T3 888 aa24.07■■□□□ 1.44
TSPAN3-206ENST00000559373 RNF41Q9H4P4 317 aaPredicted RBP24.07■■□□□ 1.44
TSPAN3-206ENST00000559373 CSF2RAP15509 400 aa24.06■■□□□ 1.44
TSPAN3-206ENST00000559373 PDE4AP27815 886 aa24.06■■□□□ 1.44
TSPAN3-206ENST00000559373 IQSEC1Q6DN90 963 aa24.06■■□□□ 1.44
TSPAN3-206ENST00000559373 RNF207Q6ZRF8 634 aa24.06■■□□□ 1.44
TSPAN3-206ENST00000559373 PPP1R13LQ8WUF5 828 aa24.06■■□□□ 1.44
TSPAN3-206ENST00000559373 CDX2Q99626 313 aaPredicted RBP24.06■■□□□ 1.44
TSPAN3-206ENST00000559373 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.06■■□□□ 1.442e-7■■■■□ 20.1
TSPAN3-206ENST00000559373 GRIN2DO15399 1336 aa24.06■■□□□ 1.44
TSPAN3-206ENST00000559373 MROH7Q68CQ1 1323 aa24.06■■□□□ 1.44
TSPAN3-206ENST00000559373 SNHG28P0DPA3 235 aa24.05■■□□□ 1.44
TSPAN3-206ENST00000559373 CYP2C18P33260 490 aa24.05■■□□□ 1.44
TSPAN3-206ENST00000559373 VTA1Q9NP79 307 aa24.05■■□□□ 1.44
TSPAN3-206ENST00000559373 UMODL1Q5DID0 1318 aa24.05■■□□□ 1.44
TSPAN3-206ENST00000559373 PCP11498 1178 aaKnown RBP24.04■■□□□ 1.44
TSPAN3-206ENST00000559373 RPS6P62753 249 aaKnown RBP24.04■■□□□ 1.44
TSPAN3-206ENST00000559373 NKX3-2P78367 333 aa24.04■■□□□ 1.44
TSPAN3-206ENST00000559373 SMAD3P84022 425 aaKnown RBP24.04■■□□□ 1.44
TSPAN3-206ENST00000559373 ITGA7Q13683 1181 aa24.04■■□□□ 1.44
TSPAN3-206ENST00000559373 MFSD5Q6N075 450 aa24.04■■□□□ 1.44
TSPAN3-206ENST00000559373 C16orf59Q7L2K0 433 aa24.04■■□□□ 1.44
TSPAN3-206ENST00000559373 PNMA1Q8ND90 353 aa24.04■■□□□ 1.44
TSPAN3-206ENST00000559373 MORC4Q8TE76 937 aa24.04■■□□□ 1.44
TSPAN3-206ENST00000559373 TBC1D5Q92609 795 aa24.04■■□□□ 1.44
TSPAN3-206ENST00000559373 WDR11Q9BZH6 1224 aa24.04■■□□□ 1.44
TSPAN3-206ENST00000559373 TRPV6Q9H1D0 765 aa24.04■■□□□ 1.44
TSPAN3-206ENST00000559373 ZSWIM5Q9P217 1185 aa24.04■■□□□ 1.44
TSPAN3-206ENST00000559373 ADD3Q9UEY8 706 aaKnown RBP24.04■■□□□ 1.44
TSPAN3-206ENST00000559373 TLR3O15455 904 aaKnown RBP24.03■■□□□ 1.44
TSPAN3-206ENST00000559373 MYLIPQ8WY64 445 aa24.03■■□□□ 1.44
TSPAN3-206ENST00000559373 KAT14Q9H8E8 782 aa24.03■■□□□ 1.44
TSPAN3-206ENST00000559373 VAT1LQ9HCJ6 419 aa24.03■■□□□ 1.44
TSPAN3-206ENST00000559373 SCN10AQ9Y5Y9 1956 aa24.02■■□□□ 1.44
TSPAN3-206ENST00000559373 GRXCR1A8MXD5 290 aa24.02■■□□□ 1.44
TSPAN3-206ENST00000559373 CD4P01730 458 aa24.02■■□□□ 1.44
TSPAN3-206ENST00000559373 IQCA1Q86XH1 822 aa24.02■■□□□ 1.44
TSPAN3-206ENST00000559373 DGKHQ86XP1 1220 aa24.02■■□□□ 1.44
TSPAN3-206ENST00000559373 ENAHQ8N8S7 591 aaPredicted RBP24.02■■□□□ 1.44
TSPAN3-206ENST00000559373 COPS5Q92905 334 aa24.02■■□□□ 1.44
TSPAN3-206ENST00000559373 ZSCAN10Q96SZ4 725 aaPredicted RBP24.02■■□□□ 1.44
TSPAN3-206ENST00000559373 DSCC1Q9BVC3 393 aa24.02■■□□□ 1.44
TSPAN3-206ENST00000559373 HIP1O00291 1037 aa24.01■■□□□ 1.43
TSPAN3-206ENST00000559373 GSPT1P15170 499 aaKnown RBP24.01■■□□□ 1.43
TSPAN3-206ENST00000559373 CDC37Q16543 378 aaPredicted RBP24.01■■□□□ 1.43
TSPAN3-206ENST00000559373 IMMTQ16891 758 aaKnown RBP24.01■■□□□ 1.43
TSPAN3-206ENST00000559373 DUSP28Q4G0W2 176 aa24.01■■□□□ 1.43
TSPAN3-206ENST00000559373 TMEM240Q5SV17 173 aa24.01■■□□□ 1.43
TSPAN3-206ENST00000559373 ADGRF4Q8IZF3 695 aa24.01■■□□□ 1.43
TSPAN3-206ENST00000559373 TNKSO95271 1327 aa24.01■■□□□ 1.43
TSPAN3-206ENST00000559373 DOCK5Q9H7D0 1870 aa24■■□□□ 1.43
TSPAN3-206ENST00000559373 ZEB2O60315 1214 aa24■■□□□ 1.43
TSPAN3-206ENST00000559373 B4GALT4O60513 344 aa24■■□□□ 1.43
TSPAN3-206ENST00000559373 MYL3P08590 195 aa24■■□□□ 1.43
TSPAN3-206ENST00000559373 CCL23P55773 120 aa24■■□□□ 1.43
TSPAN3-206ENST00000559373 PDE4DQ08499 809 aa24■■□□□ 1.43
TSPAN3-206ENST00000559373 GPATCH4Q5T3I0 446 aaKnown RBP24■■□□□ 1.43
TSPAN3-206ENST00000559373 ZNF365Q70YC5 407 aa24■■□□□ 1.43
TSPAN3-206ENST00000559373 SLC43A3Q8NBI5 491 aa24■■□□□ 1.43
TSPAN3-206ENST00000559373 DHX16O60231 1041 aaKnown RBP23.99■■□□□ 1.43
TSPAN3-206ENST00000559373 PPIGQ13427 754 aaKnown RBP eCLIP23.99■■□□□ 1.43
TSPAN3-206ENST00000559373 TMEM199Q8N511 208 aa23.99■■□□□ 1.43
TSPAN3-206ENST00000559373 OR6J1Q8NGC5 347 aa23.99■■□□□ 1.43
TSPAN3-206ENST00000559373 HIPK3Q9H422 1215 aa23.99■■□□□ 1.43
TSPAN3-206ENST00000559373 TET1Q8NFU7 2136 aa23.99■■□□□ 1.43
TSPAN3-206ENST00000559373 CABYRO75952 493 aa23.98■■□□□ 1.43
TSPAN3-206ENST00000559373 PBX2P40425 430 aa23.98■■□□□ 1.43
TSPAN3-206ENST00000559373 TTC22Q5TAA0 569 aa23.98■■□□□ 1.43
TSPAN3-206ENST00000559373 CYB5R4Q7L1T6 521 aa23.98■■□□□ 1.43
TSPAN3-206ENST00000559373 STAG2Q8N3U4 1231 aa23.98■■□□□ 1.43
TSPAN3-206ENST00000559373 Q9Y3F1 56 aa23.98■■□□□ 1.43
TSPAN3-206ENST00000559373 WDR19Q8NEZ3 1342 aa23.98■■□□□ 1.43
TSPAN3-206ENST00000559373 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.97■■□□□ 1.43
TSPAN3-206ENST00000559373 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.97■■□□□ 1.43
TSPAN3-206ENST00000559373 DNAJB2P25686 324 aa23.97■■□□□ 1.43
TSPAN3-206ENST00000559373 CHMP4BP1P59074 171 aa23.97■■□□□ 1.43
TSPAN3-206ENST00000559373 CUL9Q8IWT3 2517 aa23.97■■□□□ 1.43
TSPAN3-206ENST00000559373 TAAR1Q96RJ0 339 aa23.97■■□□□ 1.43
TSPAN3-206ENST00000559373 TRMT13Q9NUP7 481 aaKnown RBP23.97■■□□□ 1.43
TSPAN3-206ENST00000559373 COL20A1Q9P218 1284 aa23.97■■□□□ 1.43
TSPAN3-206ENST00000559373 CTNNA3Q9UI47 895 aa23.97■■□□□ 1.43
TSPAN3-206ENST00000559373 RBM47A0AV96 593 aaKnown RBP23.96■■□□□ 1.43
TSPAN3-206ENST00000559373 ARIH2O95376 493 aa23.96■■□□□ 1.43
TSPAN3-206ENST00000559373 PARP1P09874 1014 aaKnown RBP23.96■■□□□ 1.43
TSPAN3-206ENST00000559373 PTH1RQ03431 593 aa23.96■■□□□ 1.43
TSPAN3-206ENST00000559373 QRICH1Q2TAL8 776 aa23.96■■□□□ 1.43
TSPAN3-206ENST00000559373 ANKS1AQ92625 1134 aa23.96■■□□□ 1.43
TSPAN3-206ENST00000559373 UBAC1Q9BSL1 405 aa23.96■■□□□ 1.43
TSPAN3-206ENST00000559373 KRT23Q9C075 422 aa23.96■■□□□ 1.43
TSPAN3-206ENST00000559373 CHD9Q3L8U1 2897 aa23.96■■□□□ 1.43
TSPAN3-206ENST00000559373 RBAK-RBAKDNI3L0D1 243 aa23.95■■□□□ 1.42
TSPAN3-206ENST00000559373 CYP2C9P11712 490 aa23.95■■□□□ 1.42
TSPAN3-206ENST00000559373 PURAQ00577 322 aaKnown RBP23.95■■□□□ 1.42
TSPAN3-206ENST00000559373 GRIN2CQ14957 1233 aa23.95■■□□□ 1.42
TSPAN3-206ENST00000559373 PPP2R5BQ15173 497 aa23.95■■□□□ 1.42
TSPAN3-206ENST00000559373 ASPRV1Q53RT3 343 aa23.95■■□□□ 1.42
TSPAN3-206ENST00000559373 CCDC178Q5BJE1 867 aa23.95■■□□□ 1.42
TSPAN3-206ENST00000559373 MAFAQ8NHW3 353 aaPredicted RBP23.95■■□□□ 1.42
TSPAN3-206ENST00000559373 SCLYQ96I15 445 aa23.95■■□□□ 1.42
TSPAN3-206ENST00000559373 JMJD4Q9H9V9 463 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms