RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 KIF3BO15066 747 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 DYNC1LI2O43237 492 aaPredicted RBP3.03□□□□□ -1.92
GABPB1-209ENST00000559100 TSPAN6O43657 245 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 EYA4O95677 639 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 SCGB1D2O95969 90 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 APBA3O96018 575 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 KRT18P05783 430 aaKnown RBP3.03□□□□□ -1.92
GABPB1-209ENST00000559100 GSNP06396 782 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 THBDP07204 575 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 FAM87AP0C7U9 286 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 MAP4P27816 1152 aaKnown RBP3.03□□□□□ -1.92
GABPB1-209ENST00000559100 BUD31P41223 144 aaPredicted RBP3.03□□□□□ -1.92
GABPB1-209ENST00000559100 NOP2P46087 812 aaKnown RBP3.03□□□□□ -1.92
GABPB1-209ENST00000559100 IREB2P48200 963 aaKnown RBP3.03□□□□□ -1.92
GABPB1-209ENST00000559100 RAB27AP51159 221 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 NEK2P51955 445 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 ST5P78524 1137 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 LRRC41Q15345 812 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 SEPT7Q16181 437 aaKnown RBP3.03□□□□□ -1.92
GABPB1-209ENST00000559100 NTRK3Q16288 839 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 SKOR2Q2VWA4 1001 aaPredicted RBP3.03□□□□□ -1.92
GABPB1-209ENST00000559100 ATP13A4Q4VNC1 1196 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 SFRP5Q5T4F7 317 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 STYK1Q6J9G0 422 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 SLC4A10Q6U841 1118 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 CRTC3Q6UUV7 619 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 HDGFL2Q7Z4V5 671 aaPredicted RBP3.03□□□□□ -1.92
GABPB1-209ENST00000559100 PASD1Q8IV76 773 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 IFNL3Q8IZI9 196 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 MYO1HQ8N1T3 1032 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 TMEM130Q8N3G9 435 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 CNTD1Q8N815 330 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 IGSF22Q8N9C0 903 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 CHAMP1Q96JM3 812 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 C8orf48Q96LL4 319 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 GPR101Q96P66 508 aaPredicted RBP3.03□□□□□ -1.92
GABPB1-209ENST00000559100 PCGF6Q9BYE7 350 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 ASPSCR1Q9BZE9 553 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 MTFR1LQ9H019 292 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 PUS7LQ9H0K6 701 aaKnown RBP3.03□□□□□ -1.92
GABPB1-209ENST00000559100 ACSS3Q9H6R3 686 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 GEMIN8Q9NWZ8 242 aaKnown RBP3.03□□□□□ -1.92
GABPB1-209ENST00000559100 ZIM2Q9NZV7 527 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 GTF2IRD1Q9UHL9 959 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 ZNF180Q9UJW8 692 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 MINPP1Q9UNW1 487 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 APOBEC2Q9Y235 224 aaKnown RBP3.03□□□□□ -1.92
GABPB1-209ENST00000559100 BACE2Q9Y5Z0 518 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 ASXL2Q76L83 1435 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 PLEKHD1A6NEE1 506 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 ZNF891A8MT65 544 aaPredicted RBP3.02□□□□□ -1.93
GABPB1-209ENST00000559100 M0R2C6 588 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 MYO1BO43795 1136 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 ZEB2O60315 1214 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 CAND2O75155 1236 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 LEFTY1O75610 366 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 GLRX3O76003 335 aaKnown RBP3.02□□□□□ -1.93
GABPB1-209ENST00000559100 KRT37O76014 449 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 SNUPNO95149 360 aaKnown RBP3.02□□□□□ -1.93
GABPB1-209ENST00000559100 SCG5P05408 212 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 GSTM1P09488 218 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 ZNF865P0CJ78 1059 aaPredicted RBP3.02□□□□□ -1.93
GABPB1-209ENST00000559100 PLS3P13797 630 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 POU3F2P20265 443 aaPredicted RBP3.02□□□□□ -1.93
GABPB1-209ENST00000559100 LTBRP36941 435 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 KIR3DL1P43629 444 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 ID4P47928 161 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 DNM2P50570 870 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 OCRLQ01968 901 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 NRG1Q02297 640 aaPredicted RBP3.02□□□□□ -1.93
GABPB1-209ENST00000559100 MCL1Q07820 350 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 PAK1Q13153 545 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 OS9Q13438 667 aaPredicted RBP3.02□□□□□ -1.93
GABPB1-209ENST00000559100 BIRC2Q13490 618 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 PIN1Q13526 163 aaPredicted RBP3.02□□□□□ -1.93
GABPB1-209ENST00000559100 NFE2Q16621 373 aaPredicted RBP3.02□□□□□ -1.93
GABPB1-209ENST00000559100 ABCB5Q2M3G0 1257 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 FAM47CQ5HY64 1035 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 SLC35F1Q5T1Q4 408 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 SYDE2Q5VT97 1194 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 LINC00114Q6XXX2 140 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 EP400NLQ6ZTU2 488 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 BEND4Q6ZU67 534 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 ILDR2Q71H61 639 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 EXOC8Q8IYI6 725 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 NXPE1Q8N323 547 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 NAT16Q8N8M0 369 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 DTWD2Q8NBA8 298 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 MORC4Q8TE76 937 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 DIO2Q92813 273 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 CHMP4CQ96CF2 233 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 VWCEQ96DN2 955 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 HOOK2Q96ED9 719 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 COX4I2Q96KJ9 171 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 NACC1Q96RE7 527 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 DUSP23Q9BVJ7 150 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 CDADC1Q9BWV3 514 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 THG1LQ9NWX6 298 aaKnown RBP3.02□□□□□ -1.93
GABPB1-209ENST00000559100 PRR13Q9NZ81 148 aa3.02□□□□□ -1.93
GABPB1-209ENST00000559100 CLEC1BQ9P126 229 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms