RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 SLC23A3Q6PIS1 610 aa6.87□□□□□ -1.31
CASC4-207ENST00000559037 DEFB132Q7Z7B7 95 aa6.87□□□□□ -1.31
CASC4-207ENST00000559037 METTL16Q86W50 562 aaKnown RBP6.87□□□□□ -1.31
CASC4-207ENST00000559037 TCP11L2Q8N4U5 519 aa6.87□□□□□ -1.31
CASC4-207ENST00000559037 KCNH5Q8NCM2 988 aa6.87□□□□□ -1.31
CASC4-207ENST00000559037 EAF1Q96JC9 268 aaPredicted RBP6.87□□□□□ -1.31
CASC4-207ENST00000559037 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.87□□□□□ -1.31
CASC4-207ENST00000559037 KIAA1522Q9P206 1035 aaPredicted RBP6.87□□□□□ -1.31
CASC4-207ENST00000559037 THRAP3Q9Y2W1 955 aaKnown RBP6.87□□□□□ -1.31
CASC4-207ENST00000559037 NFAT5O94916 1531 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 PRR33A8MZF0 331 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 UPK3BL1B0FP48 263 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 CHURC1-FNTBB4DL54 471 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 UPK3BL2E5RIL1 263 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 CBX7O95931 251 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 MCM4P33991 863 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 TNK2Q07912 1038 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 IKZF1Q13422 519 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 ZNF574Q6ZN55 896 aaPredicted RBP6.86□□□□□ -1.31
CASC4-207ENST00000559037 TMPRSS7Q7RTY8 843 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 TMEM40Q8WWA1 233 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 CCDC120Q96HB5 630 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 CNNM2Q9H8M5 875 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 SEMA3GQ9NS98 782 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 USP35Q9P2H5 1018 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 ZNRF3Q9ULT6 936 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 PCDHGB7Q9Y5F8 929 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 PEAK1Q9H792 1746 aa6.86□□□□□ -1.31
CASC4-207ENST00000559037 CRB1P82279 1406 aa6.85□□□□□ -1.31
CASC4-207ENST00000559037 UNCXA6NJT0 531 aa6.85□□□□□ -1.31
CASC4-207ENST00000559037 BIN1O00499 593 aa6.85□□□□□ -1.31
CASC4-207ENST00000559037 JUNBP17275 347 aaPredicted RBP6.85□□□□□ -1.31
CASC4-207ENST00000559037 GBP1P32455 592 aa6.85□□□□□ -1.31
CASC4-207ENST00000559037 OVOS1Q6IE37 1185 aa6.85□□□□□ -1.31
CASC4-207ENST00000559037 GK5Q6ZS86 529 aa6.85□□□□□ -1.31
CASC4-207ENST00000559037 NLRC3Q7RTR2 1065 aa6.85□□□□□ -1.31
CASC4-207ENST00000559037 HDGFL2Q7Z4V5 671 aaPredicted RBP6.85□□□□□ -1.31
CASC4-207ENST00000559037 NME9Q86XW9 330 aa6.85□□□□□ -1.31
CASC4-207ENST00000559037 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.85□□□□□ -1.31
CASC4-207ENST00000559037 PI4K2BQ8TCG2 481 aa6.85□□□□□ -1.31
CASC4-207ENST00000559037 HSPA12BQ96MM6 686 aa6.85□□□□□ -1.31
CASC4-207ENST00000559037 KREMEN1Q96MU8 473 aa6.85□□□□□ -1.31
CASC4-207ENST00000559037 GPR62Q9BZJ7 368 aa6.85□□□□□ -1.31
CASC4-207ENST00000559037 GPATCH2Q9NW75 528 aa6.85□□□□□ -1.31
CASC4-207ENST00000559037 TERF2IPQ9NYB0 399 aa6.85□□□□□ -1.31
CASC4-207ENST00000559037 A0A1W2PP64 1363 aa6.84□□□□□ -1.31
CASC4-207ENST00000559037 WDR17Q8IZU2 1322 aa6.84□□□□□ -1.31
CASC4-207ENST00000559037 CNTNAP4Q9C0A0 1308 aa6.84□□□□□ -1.31
CASC4-207ENST00000559037 TNFRSF10CO14798 259 aa6.84□□□□□ -1.31
CASC4-207ENST00000559037 DNAJA2O60884 412 aa6.84□□□□□ -1.31
CASC4-207ENST00000559037 RACK1P63244 317 aaKnown RBP6.84□□□□□ -1.31
CASC4-207ENST00000559037 HDLBPQ00341 1268 aaKnown RBP6.84□□□□□ -1.31
CASC4-207ENST00000559037 CLCQ05315 142 aa6.84□□□□□ -1.31
CASC4-207ENST00000559037 ZNF792Q3KQV3 632 aa6.84□□□□□ -1.31
CASC4-207ENST00000559037 ARSHQ5FYA8 562 aa6.84□□□□□ -1.31
CASC4-207ENST00000559037 INTS3Q68E01 1043 aaKnown RBP6.84□□□□□ -1.31
CASC4-207ENST00000559037 NT5DC4Q86YG4 428 aa6.84□□□□□ -1.31
CASC4-207ENST00000559037 TAB3Q8N5C8 712 aaPredicted RBP6.84□□□□□ -1.31
CASC4-207ENST00000559037 DTWD2Q8NBA8 298 aa6.84□□□□□ -1.31
CASC4-207ENST00000559037 RASGRP4Q8TDF6 673 aa6.84□□□□□ -1.31
CASC4-207ENST00000559037 Q96M66 194 aa6.84□□□□□ -1.31
CASC4-207ENST00000559037 TGIF2Q9GZN2 237 aa6.84□□□□□ -1.31
CASC4-207ENST00000559037 ABCC6O95255 1503 aa6.84□□□□□ -1.31
CASC4-207ENST00000559037 EDC4Q6P2E9 1401 aaKnown RBP6.84□□□□□ -1.32
CASC4-207ENST00000559037 USP47Q96K76 1375 aa6.83□□□□□ -1.32
CASC4-207ENST00000559037 KIF20BQ96Q89 1820 aa6.83□□□□□ -1.32
CASC4-207ENST00000559037 H3BS24 57 aa6.83□□□□□ -1.32
CASC4-207ENST00000559037 ITGB5P18084 799 aa6.83□□□□□ -1.32
CASC4-207ENST00000559037 TMF1P82094 1093 aa6.83□□□□□ -1.32
CASC4-207ENST00000559037 ZP2Q05996 745 aa6.83□□□□□ -1.32
CASC4-207ENST00000559037 CDKAL1Q5VV42 579 aa6.83□□□□□ -1.32
CASC4-207ENST00000559037 TOM1L2Q6ZVM7 507 aa6.83□□□□□ -1.32
CASC4-207ENST00000559037 ATG4DQ86TL0 474 aaPredicted RBP6.83□□□□□ -1.32
CASC4-207ENST00000559037 RBBP8NLQ8NC74 664 aaPredicted RBP6.83□□□□□ -1.32
CASC4-207ENST00000559037 BAHD1Q8TBE0 780 aaPredicted RBP6.83□□□□□ -1.32
CASC4-207ENST00000559037 ATG4CQ96DT6 458 aa6.83□□□□□ -1.32
CASC4-207ENST00000559037 CAMKK2Q96RR4 588 aa6.83□□□□□ -1.32
CASC4-207ENST00000559037 KIF2CQ99661 725 aa6.83□□□□□ -1.32
CASC4-207ENST00000559037 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.83□□□□□ -1.32
CASC4-207ENST00000559037 DISP2A7MBM2 1401 aa6.83□□□□□ -1.32
CASC4-207ENST00000559037 LRRC37A3O60309 1634 aa6.83□□□□□ -1.32
CASC4-207ENST00000559037 NINLQ9Y2I6 1382 aa6.82□□□□□ -1.32
CASC4-207ENST00000559037 MYOM1P52179 1685 aa6.82□□□□□ -1.32
CASC4-207ENST00000559037 RREB1Q92766 1687 aa6.82□□□□□ -1.32
CASC4-207ENST00000559037 FYB1O15117 783 aa6.82□□□□□ -1.32
CASC4-207ENST00000559037 PAX4O43316 350 aa6.82□□□□□ -1.32
CASC4-207ENST00000559037 SRFP11831 508 aa6.82□□□□□ -1.32
CASC4-207ENST00000559037 TAL1P17542 331 aaPredicted RBP6.82□□□□□ -1.32
CASC4-207ENST00000559037 GJA8P48165 433 aa6.82□□□□□ -1.32
CASC4-207ENST00000559037 ENOX1Q8TC92 643 aaKnown RBP6.82□□□□□ -1.32
CASC4-207ENST00000559037 GPRASP2Q96D09 838 aa6.82□□□□□ -1.32
CASC4-207ENST00000559037 FERD3LQ96RJ6 166 aa6.82□□□□□ -1.32
CASC4-207ENST00000559037 TM9SF2Q99805 663 aa6.82□□□□□ -1.32
CASC4-207ENST00000559037 OVOS2A0A0J9YW53 1432 aa6.82□□□□□ -1.32
CASC4-207ENST00000559037 OVOS2Q6IE36 1432 aa6.82□□□□□ -1.32
CASC4-207ENST00000559037 FAM208AQ9UK61 1670 aaKnown RBP6.81□□□□□ -1.32
CASC4-207ENST00000559037 UBOX5O94941 541 aa6.81□□□□□ -1.32
CASC4-207ENST00000559037 NME1P15531 152 aaKnown RBP6.81□□□□□ -1.32
CASC4-207ENST00000559037 FBLN1P23142 703 aa6.81□□□□□ -1.32
CASC4-207ENST00000559037 SOX9P48436 509 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms