RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 TAF6LQ9Y6J9 622 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 TRANK1O15050 2925 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 BAZ2BQ9UIF8 2168 aaKnown RBP6.52□□□□□ -1.36
SMAD3-209ENST00000558894 WDR19Q8NEZ3 1342 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 LOC102724159A0A0B4J2E5 919 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 ASB14A6NK59 587 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 B4E1Z4 1266 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 ARVCFO00192 962 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 OPLAHO14841 1288 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 TIMP1P01033 207 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 NT5C2P49902 561 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 RPS6P62753 249 aaKnown RBP6.52□□□□□ -1.37
SMAD3-209ENST00000558894 GHRHRQ02643 423 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 IKQ13123 557 aaPredicted RBP6.52□□□□□ -1.37
SMAD3-209ENST00000558894 COL9A3Q14050 684 aaPredicted RBP6.52□□□□□ -1.37
SMAD3-209ENST00000558894 PWP2Q15269 919 aaKnown RBP6.52□□□□□ -1.37
SMAD3-209ENST00000558894 CCDC96Q2M329 555 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 GNASQ5JWF2 1037 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 TTC22Q5TAA0 569 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 IQSEC1Q6DN90 963 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 MFSD5Q6N075 450 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 CXCL17Q6UXB2 119 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 NSMFQ6X4W1 530 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 CYB5R4Q7L1T6 521 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 EEPD1Q7L9B9 569 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 PCSK9Q8NBP7 692 aaKnown RBP6.52□□□□□ -1.37
SMAD3-209ENST00000558894 RGS22Q8NE09 1264 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 NUP133Q8WUM0 1156 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 ESR2Q92731 530 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 GLT1D1Q96MS3 346 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 ZSCAN10Q96SZ4 725 aaPredicted RBP6.52□□□□□ -1.37
SMAD3-209ENST00000558894 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.52□□□□□ -1.373e-9■□□□□ 10.9
SMAD3-209ENST00000558894 UBA5Q9GZZ9 404 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 RNF41Q9H4P4 317 aaPredicted RBP6.52□□□□□ -1.37
SMAD3-209ENST00000558894 VTA1Q9NP79 307 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 TOMM22Q9NS69 142 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 TMEM39AQ9NV64 488 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 COL20A1Q9P218 1284 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 ZBTB47Q9UFB7 747 aaPredicted RBP6.52□□□□□ -1.37
SMAD3-209ENST00000558894 PRKAG2Q9UGJ0 569 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 RAPGEFL1Q9UHV5 662 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 Q9Y3F1 56 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 CTDP1Q9Y5B0 961 aaPredicted RBP6.52□□□□□ -1.37
SMAD3-209ENST00000558894 CHD7Q9P2D1 2997 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 TET1Q8NFU7 2136 aa6.52□□□□□ -1.37
SMAD3-209ENST00000558894 TNKSO95271 1327 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 UMODL1Q5DID0 1318 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 A0A0U1RQG5 324 aaPredicted RBP6.51□□□□□ -1.37
SMAD3-209ENST00000558894 PPP1R11O60927 126 aaPredicted RBP6.51□□□□□ -1.37
SMAD3-209ENST00000558894 ARIH2O95376 493 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 CYP21A2P08686 494 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 RAG1P15918 1043 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 CHMLP26374 656 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 MFAP1P55081 439 aaKnown RBP6.51□□□□□ -1.37
SMAD3-209ENST00000558894 PSMC6P62333 389 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 SMAD3P84022 425 aaKnown RBP6.51□□□□□ -1.37
SMAD3-209ENST00000558894 PTH1RQ03431 593 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 FPGSQ05932 587 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 FSCN1Q16658 493 aaKnown RBP6.51□□□□□ -1.37
SMAD3-209ENST00000558894 DUSP28Q4G0W2 176 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 RNF207Q6ZRF8 634 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 STOX1Q6ZVD7 989 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 TLK2Q86UE8 772 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 ADGRF4Q8IZF3 695 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 STAG2Q8N3U4 1231 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 PNMA1Q8ND90 353 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 MTMR8Q96EF0 704 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 RNF39Q9H2S5 420 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 SEMA6BQ9H3T3 888 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 JMJD4Q9H9V9 463 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 SENP2Q9HC62 589 aa6.51□□□□□ -1.37
SMAD3-209ENST00000558894 SIP14410 1827 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 XIRP2A4UGR9 3374 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 PTPDC1A2A3K4 754 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 PALM3A6NDB9 673 aaPredicted RBP6.5□□□□□ -1.37
SMAD3-209ENST00000558894 A6NJR5 290 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 DCDC2CA8MYV0 355 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 RBAK-RBAKDNI3L0D1 243 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 HIP1O00291 1037 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 DYNC1LI2O43237 492 aaPredicted RBP6.5□□□□□ -1.37
SMAD3-209ENST00000558894 B4GALT4O60513 344 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 CSF2RAP15509 400 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 COL9A1P20849 921 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 CALML3P27482 149 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 ANTXR2P58335 489 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 IRX6P78412 446 aaPredicted RBP6.5□□□□□ -1.37
SMAD3-209ENST00000558894 PURAQ00577 322 aaKnown RBP6.5□□□□□ -1.37
SMAD3-209ENST00000558894 ITGA7Q13683 1181 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 CDC37Q16543 378 aaPredicted RBP6.5□□□□□ -1.37
SMAD3-209ENST00000558894 QRICH1Q2TAL8 776 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 TMEM240Q5SV17 173 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 GPATCH4Q5T3I0 446 aaKnown RBP6.5□□□□□ -1.37
SMAD3-209ENST00000558894 CCDC62Q6P9F0 684 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 KIAA1211Q6ZU35 1233 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 DNERQ8NFT8 737 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 SYTL5Q8TDW5 730 aaPredicted RBP6.5□□□□□ -1.37
SMAD3-209ENST00000558894 COPS5Q92905 334 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 FAM161BQ96MY7 647 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 TAAR1Q96RJ0 339 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 CTAGE1Q96RT6 745 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms