RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 HSPD1P10809 573 aaKnown RBP9.49□□□□□ -0.89
TRAF3-205ENST00000558700 TOP1P11387 765 aaKnown RBP9.49□□□□□ -0.89
TRAF3-205ENST00000558700 ALAS1P13196 640 aa9.49□□□□□ -0.89
TRAF3-205ENST00000558700 CST5P28325 142 aaPredicted RBP9.49□□□□□ -0.89
TRAF3-205ENST00000558700 RFC5P40937 340 aa9.49□□□□□ -0.89
TRAF3-205ENST00000558700 NOVP48745 357 aa9.49□□□□□ -0.89
TRAF3-205ENST00000558700 ACVR2BQ13705 512 aa9.49□□□□□ -0.89
TRAF3-205ENST00000558700 CCDC174Q6PII3 467 aa9.49□□□□□ -0.89
TRAF3-205ENST00000558700 NUP133Q8WUM0 1156 aa9.49□□□□□ -0.89
TRAF3-205ENST00000558700 ZDHHC16Q969W1 377 aa9.49□□□□□ -0.89
TRAF3-205ENST00000558700 FGD4Q96M96 766 aa9.49□□□□□ -0.89
TRAF3-205ENST00000558700 A1CFQ9NQ94 594 aaKnown RBP9.49□□□□□ -0.89
TRAF3-205ENST00000558700 STARD7Q9NQZ5 370 aa9.49□□□□□ -0.89
TRAF3-205ENST00000558700 TCP11L1Q9NUJ3 509 aa9.49□□□□□ -0.89
TRAF3-205ENST00000558700 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.49□□□□□ -0.89
TRAF3-205ENST00000558700 PNMA2Q9UL42 364 aa9.49□□□□□ -0.89
TRAF3-205ENST00000558700 CCPG1Q9ULG6 757 aa9.49□□□□□ -0.89
TRAF3-205ENST00000558700 PRR12Q9ULL5 1215 aa9.49□□□□□ -0.89
TRAF3-205ENST00000558700 ZNF536O15090 1300 aa9.49□□□□□ -0.89
TRAF3-205ENST00000558700 ASB14A6NK59 587 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 PQBP1O60828 265 aaKnown RBP9.48□□□□□ -0.89
TRAF3-205ENST00000558700 ICAM1P05362 532 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 CLTBP09497 229 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 C6orf222P0C671 652 aaPredicted RBP9.48□□□□□ -0.89
TRAF3-205ENST00000558700 SDSP20132 328 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 FOSBP53539 338 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 HAND2P61296 217 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 NUCB1Q02818 461 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 AKNAD1Q5T1N1 836 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 SYDE2Q5VT97 1194 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 B4GALNT3Q6L9W6 998 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 MFSD6Q6ZSS7 791 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 RASGRP2Q7LDG7 609 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 PLEKHM2Q8IWE5 1019 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 CCDC144CPQ8IYA2 1237 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 DEFB123Q8N688 67 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 FAM133AQ8N9E0 248 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 PCSK9Q8NBP7 692 aaKnown RBP9.48□□□□□ -0.89
TRAF3-205ENST00000558700 ESR2Q92731 530 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 CHMP4CQ96CF2 233 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 AGBL1Q96MI9 1066 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 TRERF1Q96PN7 1200 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 UPF3AQ9H1J1 476 aaKnown RBP9.48□□□□□ -0.89
TRAF3-205ENST00000558700 RANBP17Q9H2T7 1088 aaKnown RBP9.48□□□□□ -0.89
TRAF3-205ENST00000558700 OSBPL3Q9H4L5 887 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 INCENPQ9NQS7 918 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 TACC3Q9Y6A5 838 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 DNAH12Q6ZR08 3092 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 MROH7Q68CQ1 1323 aa9.48□□□□□ -0.89
TRAF3-205ENST00000558700 DCDC2CA8MYV0 355 aa9.47□□□□□ -0.89
TRAF3-205ENST00000558700 PDHBP11177 359 aa9.47□□□□□ -0.89
TRAF3-205ENST00000558700 ACLYP53396 1101 aa9.47□□□□□ -0.89
TRAF3-205ENST00000558700 CNTN2Q02246 1040 aa9.47□□□□□ -0.89
TRAF3-205ENST00000558700 TLE2Q04725 743 aa9.47□□□□□ -0.89
TRAF3-205ENST00000558700 CCDC144BQ3MJ40 725 aa9.47□□□□□ -0.89
TRAF3-205ENST00000558700 BTNL9Q6UXG8 535 aa9.47□□□□□ -0.89
TRAF3-205ENST00000558700 NSMFQ6X4W1 530 aa9.47□□□□□ -0.89
TRAF3-205ENST00000558700 TBC1D10CQ8IV04 446 aa9.47□□□□□ -0.89
TRAF3-205ENST00000558700 ZNF454Q8N9F8 522 aa9.47□□□□□ -0.89
TRAF3-205ENST00000558700 KLHDC9Q8NEP7 349 aa9.47□□□□□ -0.89
TRAF3-205ENST00000558700 EXOC6Q8TAG9 804 aa9.47□□□□□ -0.89
TRAF3-205ENST00000558700 GLT1D1Q96MS3 346 aa9.47□□□□□ -0.89
TRAF3-205ENST00000558700 TMEM47Q9BQJ4 181 aa9.47□□□□□ -0.89
TRAF3-205ENST00000558700 CYP39A1Q9NYL5 469 aa9.47□□□□□ -0.89
TRAF3-205ENST00000558700 ELP1O95163 1332 aa9.47□□□□□ -0.89
TRAF3-205ENST00000558700 NEDD4P46934 1319 aa9.47□□□□□ -0.89
TRAF3-205ENST00000558700 MYH6P13533 1939 aa9.46□□□□□ -0.89
TRAF3-205ENST00000558700 LOC102724159A0A0B4J2E5 919 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 A0A0U1RQG5 324 aaPredicted RBP9.46□□□□□ -0.9
TRAF3-205ENST00000558700 TRIM43BA6NCK2 446 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 MYADML2A6NDP7 307 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 KIAA0355O15063 1070 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 GABBR2O75899 941 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 RAG1P15918 1043 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 GJA9P57773 515 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 TNFAIP2Q03169 654 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 PWP2Q15269 919 aaKnown RBP9.46□□□□□ -0.9
TRAF3-205ENST00000558700 KCNA10Q16322 511 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 CCDC178Q5BJE1 867 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 NOL8Q76FK4 1167 aaKnown RBP9.46□□□□□ -0.9
TRAF3-205ENST00000558700 ANKRD33Q7Z3H0 272 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 TLK2Q86UE8 772 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 IQCA1Q86XH1 822 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 KCTD17Q8N5Z5 321 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 BADQ92934 168 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 TRIM43Q96BQ3 446 aaPredicted RBP9.46□□□□□ -0.9
TRAF3-205ENST00000558700 TTC14Q96N46 770 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 TOX2Q96NM4 488 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 KATNBL1Q9H079 304 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 VTA1Q9NP79 307 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 ADD3Q9UEY8 706 aaKnown RBP9.46□□□□□ -0.9
TRAF3-205ENST00000558700 METRNQ9UJH8 293 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 FRMPD2Q68DX3 1309 aaPredicted RBP9.46□□□□□ -0.9
TRAF3-205ENST00000558700 WDR19Q8NEZ3 1342 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 RAD50Q92878 1312 aa9.46□□□□□ -0.9
TRAF3-205ENST00000558700 PTPDC1A2A3K4 754 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 SOWAHBA6NEL2 793 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 ZNF213O14771 459 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 ADCY6O43306 1168 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 IGHDP01880 384 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms