RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 NDUFB10O96000 172 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 IQCF3P0C7M6 154 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 IL9P15248 144 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 KCNA5P22460 613 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 OAZ1P54368 228 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 TMEM63BQ5T3F8 832 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 IQSEC1Q6DN90 963 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 PTCRAQ6ISU1 281 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-207ENST00000558500 TAPT1Q6NXT6 567 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 POTEBQ6S5H4 581 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 AMOTL1Q8IY63 956 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 KIFC2Q96AC6 838 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 FTOQ9C0B1 505 aaKnown RBP eCLIP8.11□□□□□ -1.11
LRRC28-207ENST00000558500 PDGFCQ9NRA1 345 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 BRWD1Q9NSI6 2320 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 ZNF536O15090 1300 aa8.1□□□□□ -1.11
LRRC28-207ENST00000558500 GRXCR2A6NFK2 248 aa8.1□□□□□ -1.11
LRRC28-207ENST00000558500 IPO8O15397 1037 aaKnown RBP8.1□□□□□ -1.11
LRRC28-207ENST00000558500 BAIAP3O94812 1187 aa8.1□□□□□ -1.11
LRRC28-207ENST00000558500 MBD4O95243 580 aa8.1□□□□□ -1.11
LRRC28-207ENST00000558500 E2F4Q16254 413 aa8.1□□□□□ -1.11
LRRC28-207ENST00000558500 AACSQ86V21 672 aa8.1□□□□□ -1.11
LRRC28-207ENST00000558500 RETREG2Q8NC44 543 aa8.1□□□□□ -1.11
LRRC28-207ENST00000558500 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.1□□□□□ -1.11
LRRC28-207ENST00000558500 CLUAP1Q96AJ1 413 aa8.1□□□□□ -1.11
LRRC28-207ENST00000558500 ACAD9Q9H845 621 aa8.1□□□□□ -1.11
LRRC28-207ENST00000558500 SUGCTQ9HAC7 445 aa8.1□□□□□ -1.11
LRRC28-207ENST00000558500 A1CFQ9NQ94 594 aaKnown RBP8.1□□□□□ -1.11
LRRC28-207ENST00000558500 HOMER2Q9NSB8 354 aa8.1□□□□□ -1.11
LRRC28-207ENST00000558500 POLR3EQ9NVU0 708 aa8.1□□□□□ -1.11
LRRC28-207ENST00000558500 NYAP2Q9P242 653 aa8.1□□□□□ -1.11
LRRC28-207ENST00000558500 FEM1BQ9UK73 627 aa8.1□□□□□ -1.11
LRRC28-207ENST00000558500 GOLIM4O00461 696 aa8.09□□□□□ -1.11
LRRC28-207ENST00000558500 KCNJ6P48051 423 aa8.09□□□□□ -1.11
LRRC28-207ENST00000558500 ERVK-21P61565 698 aa8.09□□□□□ -1.11
LRRC28-207ENST00000558500 WDR5P61964 334 aaKnown RBP8.09□□□□□ -1.11
LRRC28-207ENST00000558500 PURAQ00577 322 aaKnown RBP8.09□□□□□ -1.11
LRRC28-207ENST00000558500 PUS10Q3MIT2 529 aaKnown RBP8.09□□□□□ -1.11
LRRC28-207ENST00000558500 CTR9Q6PD62 1173 aa8.09□□□□□ -1.11
LRRC28-207ENST00000558500 EEPD1Q7L9B9 569 aa8.09□□□□□ -1.11
LRRC28-207ENST00000558500 TMCO2Q7Z6W1 182 aaPredicted RBP8.09□□□□□ -1.11
LRRC28-207ENST00000558500 FBXO16Q8IX29 292 aaPredicted RBP8.09□□□□□ -1.11
LRRC28-207ENST00000558500 NEK9Q8TD19 979 aa8.09□□□□□ -1.11
LRRC28-207ENST00000558500 PHOX2BQ99453 314 aa8.09□□□□□ -1.11
LRRC28-207ENST00000558500 ZBED2Q9BTP6 218 aa8.09□□□□□ -1.11
LRRC28-207ENST00000558500 C1orf115Q9H7X2 142 aa8.09□□□□□ -1.11
LRRC28-207ENST00000558500 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.09□□□□□ -1.11
LRRC28-207ENST00000558500 MTUS1Q9ULD2 1270 aa8.09□□□□□ -1.11
LRRC28-207ENST00000558500 COG6Q9Y2V7 657 aa8.09□□□□□ -1.11
LRRC28-207ENST00000558500 DDX49Q9Y6V7 483 aaKnown RBP8.09□□□□□ -1.11
LRRC28-207ENST00000558500 ZFHX2Q9C0A1 2572 aaPredicted RBP8.09□□□□□ -1.12
LRRC28-207ENST00000558500 ZBED9Q6R2W3 1325 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 LINC01553A4QN01 128 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 ST18O60284 1047 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 MYL3P08590 195 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 FDX1P10109 184 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 RASA1P20936 1047 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 ADD2P35612 726 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 BFSP2Q13515 415 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 NBPF20Q3BBV1 942 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 SLFNL1Q499Z3 407 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 DUSP28Q4G0W2 176 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 FAM47CQ5HY64 1035 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 KIAA1211Q6ZU35 1233 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 HFE2Q6ZVN8 426 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 TMEM57Q8N5G2 664 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 ANKS1AQ92625 1134 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 FRAT1Q92837 279 aaPredicted RBP8.08□□□□□ -1.12
LRRC28-207ENST00000558500 DDRGK1Q96HY6 314 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 MFSD14AQ96MC6 490 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 TGS1Q96RS0 853 aaKnown RBP8.08□□□□□ -1.12
LRRC28-207ENST00000558500 DNAJC2Q99543 621 aaKnown RBP8.08□□□□□ -1.12
LRRC28-207ENST00000558500 RAD9AQ99638 391 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 MTG1Q9BT17 334 aaPredicted RBP8.08□□□□□ -1.12
LRRC28-207ENST00000558500 VTA1Q9NP79 307 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 RNF146Q9NTX7 359 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 CLIP2Q9UDT6 1046 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 NAV1Q8NEY1 1877 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 GBF1Q92538 1859 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 PARP14Q460N5 1801 aa8.08□□□□□ -1.12
LRRC28-207ENST00000558500 ZNFX1Q9P2E3 1918 aaKnown RBP8.07□□□□□ -1.12
LRRC28-207ENST00000558500 MYO5AQ9Y4I1 1855 aaKnown RBP8.07□□□□□ -1.12
LRRC28-207ENST00000558500 IGKV6D-41A0A0C4DH26 115 aa8.07□□□□□ -1.12
LRRC28-207ENST00000558500 H3BQ06 376 aaPredicted RBP8.07□□□□□ -1.12
LRRC28-207ENST00000558500 GJB5O95377 273 aa8.07□□□□□ -1.12
LRRC28-207ENST00000558500 CPT1AP50416 773 aa8.07□□□□□ -1.12
LRRC28-207ENST00000558500 DEFB103AP81534 67 aa8.07□□□□□ -1.12
LRRC28-207ENST00000558500 ZP2Q05996 745 aa8.07□□□□□ -1.12
LRRC28-207ENST00000558500 PTPN11Q06124 597 aaPredicted RBP8.07□□□□□ -1.12
LRRC28-207ENST00000558500 GPNMBQ14956 572 aa8.07□□□□□ -1.12
LRRC28-207ENST00000558500 LRRFIP1Q32MZ4 808 aaKnown RBP8.07□□□□□ -1.12
LRRC28-207ENST00000558500 TKFCQ3LXA3 575 aa8.07□□□□□ -1.12
LRRC28-207ENST00000558500 NFRKBQ6P4R8 1299 aa8.07□□□□□ -1.12
LRRC28-207ENST00000558500 ERC1Q8IUD2 1116 aa8.07□□□□□ -1.12
LRRC28-207ENST00000558500 RPAP2Q8IXW5 612 aaPredicted RBP8.07□□□□□ -1.12
LRRC28-207ENST00000558500 MORC4Q8TE76 937 aa8.07□□□□□ -1.12
LRRC28-207ENST00000558500 PPP1R13LQ8WUF5 828 aa8.07□□□□□ -1.12
LRRC28-207ENST00000558500 MKL1Q969V6 931 aa8.07□□□□□ -1.12
LRRC28-207ENST00000558500 TRERF1Q96PN7 1200 aa8.07□□□□□ -1.12
LRRC28-207ENST00000558500 TMEM121BQ9BXQ6 578 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms