RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 KRTAP9-9Q9BYP9 154 aa5.48□□□□□ -1.53
LRRC28-205ENST00000558248 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
LRRC28-205ENST00000558248 OSBPL2Q9H1P3 480 aa5.48□□□□□ -1.53
LRRC28-205ENST00000558248 NSUN3Q9H649 340 aaKnown RBP5.48□□□□□ -1.53
LRRC28-205ENST00000558248 C19orf44Q9H6X5 657 aa5.48□□□□□ -1.53
LRRC28-205ENST00000558248 PHAXQ9H814 394 aaKnown RBP5.48□□□□□ -1.53
LRRC28-205ENST00000558248 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.48□□□□□ -1.53
LRRC28-205ENST00000558248 DIP2CQ9Y2E4 1556 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 CCDC194A0A1B0GVG4 234 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 C9IYK1 514 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 EIF3JO75822 258 aaKnown RBP5.47□□□□□ -1.53
LRRC28-205ENST00000558248 TP53P04637 393 aaPredicted RBP5.47□□□□□ -1.53
LRRC28-205ENST00000558248 ITGA4P13612 1032 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 TRHRP34981 398 aaPredicted RBP5.47□□□□□ -1.53
LRRC28-205ENST00000558248 KIR2DL1P43626 348 aaPredicted RBP5.47□□□□□ -1.53
LRRC28-205ENST00000558248 KIR2DL2P43627 348 aaPredicted RBP5.47□□□□□ -1.53
LRRC28-205ENST00000558248 GIPRP48546 466 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 PPP2R5EQ16537 467 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 RUFY4Q6ZNE9 571 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 ANKLE2Q86XL3 938 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 FBXO15Q8NCQ5 510 aaPredicted RBP5.47□□□□□ -1.53
LRRC28-205ENST00000558248 BHLHE22Q8NFJ8 381 aaPredicted RBP5.47□□□□□ -1.53
LRRC28-205ENST00000558248 PMFBP1Q8TBY8 1022 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 LINC01599Q8WXQ3 324 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 MAP6Q96JE9 813 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 FCRL2Q96LA5 508 aaPredicted RBP5.47□□□□□ -1.53
LRRC28-205ENST00000558248 GMLQ99445 158 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 CDADC1Q9BWV3 514 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 RNF32Q9H0A6 362 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 ACBD3Q9H3P7 528 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 PIF1Q9H611 641 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 DCP1AQ9NPI6 582 aaPredicted RBP5.47□□□□□ -1.53
LRRC28-205ENST00000558248 FAM86C1Q9NVL1 165 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 SLC52A1Q9NWF4 448 aa5.47□□□□□ -1.53
LRRC28-205ENST00000558248 ZNF214Q9UL59 606 aaPredicted RBP5.47□□□□□ -1.53
LRRC28-205ENST00000558248 SF3B6Q9Y3B4 125 aaKnown RBP5.47□□□□□ -1.53
LRRC28-205ENST00000558248 SUPT6HQ7KZ85 1726 aaKnown RBP5.47□□□□□ -1.53
LRRC28-205ENST00000558248 CEP170BQ9Y4F5 1589 aaPredicted RBP5.46□□□□□ -1.53
LRRC28-205ENST00000558248 ZNF518AQ6AHZ1 1483 aa5.46□□□□□ -1.53
LRRC28-205ENST00000558248 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.46□□□□□ -1.54
LRRC28-205ENST00000558248 USP2O75604 605 aaPredicted RBP5.46□□□□□ -1.54
LRRC28-205ENST00000558248 HSD3B2P26439 372 aa5.46□□□□□ -1.54
LRRC28-205ENST00000558248 DNAJA1P31689 397 aaKnown RBP5.46□□□□□ -1.54
LRRC28-205ENST00000558248 ZYXQ15942 572 aaKnown RBP5.46□□□□□ -1.54
LRRC28-205ENST00000558248 GNPTABQ3T906 1256 aa5.46□□□□□ -1.54
LRRC28-205ENST00000558248 ANKRD39Q53RE8 183 aa5.46□□□□□ -1.54
LRRC28-205ENST00000558248 CRTC3Q6UUV7 619 aa5.46□□□□□ -1.54
LRRC28-205ENST00000558248 PRR23BQ6ZRT6 265 aa5.46□□□□□ -1.54
LRRC28-205ENST00000558248 CEP128Q6ZU80 1094 aa5.46□□□□□ -1.54
LRRC28-205ENST00000558248 IRF2BP1Q8IU81 584 aa5.46□□□□□ -1.54
LRRC28-205ENST00000558248 NAT16Q8N8M0 369 aa5.46□□□□□ -1.54
LRRC28-205ENST00000558248 GBP3Q9H0R5 595 aa5.46□□□□□ -1.54
LRRC28-205ENST00000558248 GP6Q9HCN6 339 aa5.46□□□□□ -1.54
LRRC28-205ENST00000558248 TNFRSF10DQ9UBN6 386 aa5.46□□□□□ -1.54
LRRC28-205ENST00000558248 FHOD1Q9Y613 1164 aa5.46□□□□□ -1.54
LRRC28-205ENST00000558248 TAF6LQ9Y6J9 622 aa5.46□□□□□ -1.54
LRRC28-205ENST00000558248 LRRC7Q96NW7 1537 aa5.46□□□□□ -1.54
LRRC28-205ENST00000558248 VWDEQ8N2E2 1590 aa5.46□□□□□ -1.54
LRRC28-205ENST00000558248 REREQ9P2R6 1566 aa5.46□□□□□ -1.54
LRRC28-205ENST00000558248 MLH3Q9UHC1 1453 aa5.45□□□□□ -1.54
LRRC28-205ENST00000558248 ZNF205O95201 554 aa5.45□□□□□ -1.54
LRRC28-205ENST00000558248 PARNO95453 639 aaKnown RBP5.45□□□□□ -1.54
LRRC28-205ENST00000558248 PDE6BP35913 854 aa5.45□□□□□ -1.54
LRRC28-205ENST00000558248 SLC7A5Q01650 507 aa5.45□□□□□ -1.54
LRRC28-205ENST00000558248 HSP90AB4PQ58FF6 505 aa5.45□□□□□ -1.54
LRRC28-205ENST00000558248 AXDND1Q5T1B0 1012 aaPredicted RBP5.45□□□□□ -1.54
LRRC28-205ENST00000558248 DCAF15Q66K64 600 aa5.45□□□□□ -1.54
LRRC28-205ENST00000558248 HEATR6Q6AI08 1181 aaKnown RBP5.45□□□□□ -1.54
LRRC28-205ENST00000558248 JAZF1Q86VZ6 243 aa5.45□□□□□ -1.54
LRRC28-205ENST00000558248 PPFIBP1Q86W92 1011 aa5.45□□□□□ -1.54
LRRC28-205ENST00000558248 PCGF6Q9BYE7 350 aa5.45□□□□□ -1.54
LRRC28-205ENST00000558248 MINPP1Q9UNW1 487 aa5.45□□□□□ -1.54
LRRC28-205ENST00000558248 YBX2Q9Y2T7 364 aaKnown RBP5.45□□□□□ -1.54
LRRC28-205ENST00000558248 ZNF281Q9Y2X9 895 aa5.45□□□□□ -1.54
LRRC28-205ENST00000558248 COL4A3BPQ9Y5P4 624 aa5.45□□□□□ -1.54
LRRC28-205ENST00000558248 KDM5CP41229 1560 aa5.45□□□□□ -1.54
LRRC28-205ENST00000558248 NEURL4Q96JN8 1562 aa5.45□□□□□ -1.54
LRRC28-205ENST00000558248 ABCA6Q8N139 1617 aa5.45□□□□□ -1.54
LRRC28-205ENST00000558248 MYO3AQ8NEV4 1616 aa5.45□□□□□ -1.54
LRRC28-205ENST00000558248 ZNF142P52746 1687 aaPredicted RBP5.44□□□□□ -1.54
LRRC28-205ENST00000558248 TMEM82A0PJX8 343 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 NFIBO00712 420 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 SHOXO15266 292 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 NRDCO43847 1150 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 VAV1P15498 845 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 CD247P20963 164 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 ARL4AP40617 200 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 CTSKP43235 329 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 NOP2P46087 812 aaKnown RBP5.44□□□□□ -1.54
LRRC28-205ENST00000558248 RAP1GAPP47736 663 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 RTP1P59025 263 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 SETQ01105 290 aaPredicted RBP5.44□□□□□ -1.54
LRRC28-205ENST00000558248 ARID5AQ03989 594 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 RBL2Q08999 1139 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 NFE2L2Q16236 605 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 GGT6Q6P531 493 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 SYDE1Q6ZW31 735 aaPredicted RBP5.44□□□□□ -1.54
LRRC28-205ENST00000558248 CCAR1Q8IX12 1150 aaKnown RBP5.44□□□□□ -1.54
LRRC28-205ENST00000558248 SMC5Q8IY18 1101 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 FIBCD1Q8N539 461 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms