RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 HMX1Q9NP08 348 aaPredicted RBP13.9□□□□□ -0.18
CDK12-203ENST00000558240 RBM27Q9P2N5 1060 aaKnown RBP13.9□□□□□ -0.18
CDK12-203ENST00000558240 ADD3Q9UEY8 706 aaKnown RBP13.9□□□□□ -0.18
CDK12-203ENST00000558240 NRBP1Q9UHY1 535 aa13.9□□□□□ -0.18
CDK12-203ENST00000558240 TPCN1Q9ULQ1 816 aa13.9□□□□□ -0.18
CDK12-203ENST00000558240 V9GY48 417 aaPredicted RBP13.9□□□□□ -0.18
CDK12-203ENST00000558240 SOWAHBA6NEL2 793 aa13.89□□□□□ -0.19
CDK12-203ENST00000558240 ASB14A6NK59 587 aa13.89□□□□□ -0.19
CDK12-203ENST00000558240 OPLAHO14841 1288 aa13.89□□□□□ -0.19
CDK12-203ENST00000558240 IFNAR1P17181 557 aa13.89□□□□□ -0.19
CDK12-203ENST00000558240 CALML3P27482 149 aa13.89□□□□□ -0.19
CDK12-203ENST00000558240 CYP2C19P33261 490 aa13.89□□□□□ -0.19
CDK12-203ENST00000558240 HSD17B4P51659 736 aa13.89□□□□□ -0.19
CDK12-203ENST00000558240 DNERQ8NFT8 737 aa13.89□□□□□ -0.19
CDK12-203ENST00000558240 TBC1D5Q92609 795 aa13.89□□□□□ -0.19
CDK12-203ENST00000558240 RNF208Q9H0X6 261 aa13.89□□□□□ -0.19
CDK12-203ENST00000558240 UNC93B1Q9H1C4 597 aa13.89□□□□□ -0.19
CDK12-203ENST00000558240 SLKQ9H2G2 1235 aaPredicted RBP13.89□□□□□ -0.19
CDK12-203ENST00000558240 NCOA5Q9HCD5 579 aaKnown RBP13.89□□□□□ -0.19
CDK12-203ENST00000558240 PAK6Q9NQU5 681 aaPredicted RBP13.89□□□□□ -0.19
CDK12-203ENST00000558240 hCG_1642624A0A1W2PR95 340 aa13.88□□□□□ -0.19
CDK12-203ENST00000558240 hCG_1984214I3L0E3 225 aa13.88□□□□□ -0.19
CDK12-203ENST00000558240 PRPF3O43395 683 aaKnown RBP13.88□□□□□ -0.19
CDK12-203ENST00000558240 PFKFB2O60825 505 aa13.88□□□□□ -0.19
CDK12-203ENST00000558240 CFBP00751 764 aa13.88□□□□□ -0.19
CDK12-203ENST00000558240 MYCP01106 439 aaPredicted RBP13.88□□□□□ -0.19
CDK12-203ENST00000558240 GJB1P08034 283 aa13.88□□□□□ -0.19
CDK12-203ENST00000558240 CYBAP13498 195 aa13.88□□□□□ -0.19
CDK12-203ENST00000558240 CAPN2P17655 700 aa13.88□□□□□ -0.19
CDK12-203ENST00000558240 RABEP1Q15276 862 aa13.88□□□□□ -0.19
CDK12-203ENST00000558240 CPLX2Q6PUV4 134 aaKnown RBP13.88□□□□□ -0.19
CDK12-203ENST00000558240 SLC30A10Q6XR72 485 aa13.88□□□□□ -0.19
CDK12-203ENST00000558240 ZNF713Q8N859 430 aaPredicted RBP13.88□□□□□ -0.19
CDK12-203ENST00000558240 SYTL5Q8TDW5 730 aaPredicted RBP13.88□□□□□ -0.19
CDK12-203ENST00000558240 RNF26Q9BY78 433 aaPredicted RBP13.88□□□□□ -0.19
CDK12-203ENST00000558240 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.88□□□□□ -0.19
CDK12-203ENST00000558240 KIAA1217Q5T5P2 1943 aa13.88□□□□□ -0.19
CDK12-203ENST00000558240 ASTN1O14525 1302 aa13.88□□□□□ -0.19
CDK12-203ENST00000558240 FRMPD3Q5JV73 1810 aa13.87□□□□□ -0.19
CDK12-203ENST00000558240 MKI67P46013 3256 aaKnown RBP13.87□□□□□ -0.19
CDK12-203ENST00000558240 B4DLN1 442 aa13.87□□□□□ -0.19
CDK12-203ENST00000558240 GCOM1H8Y6P7 765 aaPredicted RBP13.87□□□□□ -0.19
CDK12-203ENST00000558240 CPLX1O14810 134 aa13.87□□□□□ -0.19
CDK12-203ENST00000558240 SNAI1O95863 264 aaPredicted RBP13.87□□□□□ -0.19
CDK12-203ENST00000558240 POLR2MP0CAP2 368 aa13.87□□□□□ -0.19
CDK12-203ENST00000558240 ALDH5A1P51649 535 aaPredicted RBP13.87□□□□□ -0.19
CDK12-203ENST00000558240 MRPL12P52815 198 aaKnown RBP13.87□□□□□ -0.19
CDK12-203ENST00000558240 AKAP17AQ02040 695 aaKnown RBP13.87□□□□□ -0.19
CDK12-203ENST00000558240 SCRN1Q12765 414 aa13.87□□□□□ -0.19
CDK12-203ENST00000558240 STK3Q13188 491 aa13.87□□□□□ -0.19
CDK12-203ENST00000558240 PFKFB3Q16875 520 aaPredicted RBP13.87□□□□□ -0.19
CDK12-203ENST00000558240 ARMCX2Q7L311 632 aa13.87□□□□□ -0.19
CDK12-203ENST00000558240 TEX2Q8IWB9 1127 aa13.87□□□□□ -0.19
CDK12-203ENST00000558240 MORC4Q8TE76 937 aa13.87□□□□□ -0.19
CDK12-203ENST00000558240 PURBQ96QR8 312 aaKnown RBP13.87□□□□□ -0.19
CDK12-203ENST00000558240 MPHOSPH6Q99547 160 aaKnown RBP13.87□□□□□ -0.19
CDK12-203ENST00000558240 ABHD16BQ9H3Z7 469 aa13.87□□□□□ -0.19
CDK12-203ENST00000558240 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.87□□□□□ -0.19
CDK12-203ENST00000558240 CNPY2Q9Y2B0 182 aa13.87□□□□□ -0.19
CDK12-203ENST00000558240 PIK3CDO00329 1044 aa13.86□□□□□ -0.19
CDK12-203ENST00000558240 MSCO60682 206 aa13.86□□□□□ -0.19
CDK12-203ENST00000558240 CDKL5O76039 1030 aa13.86□□□□□ -0.19
CDK12-203ENST00000558240 SCG2P13521 617 aa13.86□□□□□ -0.19
CDK12-203ENST00000558240 CCND3P30281 292 aaPredicted RBP13.86□□□□□ -0.19
CDK12-203ENST00000558240 ME3Q16798 604 aa13.86□□□□□ -0.19
CDK12-203ENST00000558240 WWC2Q6AWC2 1192 aa13.86□□□□□ -0.19
CDK12-203ENST00000558240 PPP1R18Q6NYC8 613 aa13.86□□□□□ -0.19
CDK12-203ENST00000558240 HEATR3Q7Z4Q2 680 aa13.86□□□□□ -0.19
CDK12-203ENST00000558240 TRIM22Q8IYM9 498 aa13.86□□□□□ -0.19
CDK12-203ENST00000558240 TRPV1Q8NER1 839 aa13.86□□□□□ -0.19
CDK12-203ENST00000558240 NSUN6Q8TEA1 469 aaKnown RBP13.86□□□□□ -0.19
CDK12-203ENST00000558240 PHKBQ93100 1093 aa13.86□□□□□ -0.19
CDK12-203ENST00000558240 IWS1Q96ST2 819 aa13.86□□□□□ -0.19
CDK12-203ENST00000558240 PSTPIP2Q9H939 334 aa13.86□□□□□ -0.19
CDK12-203ENST00000558240 BARHL2Q9NY43 387 aa13.86□□□□□ -0.19
CDK12-203ENST00000558240 COL20A1Q9P218 1284 aa13.86□□□□□ -0.19
CDK12-203ENST00000558240 LIMCH1Q9UPQ0 1083 aa13.86□□□□□ -0.19
CDK12-203ENST00000558240 SEPT4O43236 478 aa13.85□□□□□ -0.19
CDK12-203ENST00000558240 ST18O60284 1047 aa13.85□□□□□ -0.19
CDK12-203ENST00000558240 SGPL1O95470 568 aa13.85□□□□□ -0.19
CDK12-203ENST00000558240 ZNF865P0CJ78 1059 aaPredicted RBP13.85□□□□□ -0.19
CDK12-203ENST00000558240 EDNRBP24530 442 aa13.85□□□□□ -0.19
CDK12-203ENST00000558240 GJA8P48165 433 aa13.85□□□□□ -0.19
CDK12-203ENST00000558240 SSRP1Q08945 709 aaKnown RBP13.85□□□□□ -0.19
CDK12-203ENST00000558240 ACVR2BQ13705 512 aa13.85□□□□□ -0.19
CDK12-203ENST00000558240 PKN1Q16512 942 aa13.85□□□□□ -0.19
CDK12-203ENST00000558240 PRAMEF19Q5SWL8 479 aa13.85□□□□□ -0.19
CDK12-203ENST00000558240 GPKOWQ92917 476 aaPredicted RBP eCLIP13.85□□□□□ -0.19
CDK12-203ENST00000558240 CUL5Q93034 780 aa13.85□□□□□ -0.19
CDK12-203ENST00000558240 GTF3C6Q969F1 213 aa13.85□□□□□ -0.19
CDK12-203ENST00000558240 ZSCAN31Q96LW9 406 aaPredicted RBP13.85□□□□□ -0.19
CDK12-203ENST00000558240 DEFB118Q96PH6 123 aa13.85□□□□□ -0.19
CDK12-203ENST00000558240 TAAR1Q96RJ0 339 aa13.85□□□□□ -0.19
CDK12-203ENST00000558240 RMDN3Q96TC7 470 aa13.85□□□□□ -0.19
CDK12-203ENST00000558240 SLC26A6Q9BXS9 759 aa13.85□□□□□ -0.19
CDK12-203ENST00000558240 CRISPLD2Q9H0B8 497 aa13.85□□□□□ -0.19
CDK12-203ENST00000558240 GLT8D2Q9H1C3 349 aa13.85□□□□□ -0.19
CDK12-203ENST00000558240 LRRC37A2A6NM11 1700 aa13.84□□□□□ -0.19
CDK12-203ENST00000558240 POTEFA5A3E0 1075 aa13.84□□□□□ -0.19
CDK12-203ENST00000558240 STXBP3O00186 592 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms