RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 CDC5LQ99459 802 aaKnown RBP8.33□□□□□ -1.08
MARK3-212ENST00000558223 ELP3Q9H9T3 547 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 CHST12Q9NRB3 414 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 SWAP70Q9UH65 585 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 TRMT112Q9UI30 125 aaKnown RBP8.33□□□□□ -1.08
MARK3-212ENST00000558223 TLL2Q9Y6L7 1015 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 ELP1O95163 1332 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 SPATA31A5Q5VU36 1347 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 SPATA31A7Q8IWB4 1347 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 UBAP1LF5GYI3 381 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 GOLIM4O00461 696 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 TERTO14746 1132 aaKnown RBP8.32□□□□□ -1.08
MARK3-212ENST00000558223 PDE8BO95263 885 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 CPEP16870 476 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 ITGA6P23229 1130 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 VARSP26640 1264 aaKnown RBP8.32□□□□□ -1.08
MARK3-212ENST00000558223 GJB2P29033 226 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 PDE6BP35913 854 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 CRKP46108 304 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 PIP4K2AP48426 406 aaPredicted RBP8.32□□□□□ -1.08
MARK3-212ENST00000558223 NT5C2P49902 561 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 RAB27AP51159 221 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 TIMM10P62072 90 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 KRT85P78386 507 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 UBE3CQ15386 1083 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 PUM3Q15397 648 aaKnown RBP8.32□□□□□ -1.08
MARK3-212ENST00000558223 PPP2R5EQ16537 467 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 ZSCAN23Q3MJ62 389 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 CCDC152Q4G0S7 254 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 CAVIN1Q6NZI2 390 aaKnown RBP8.32□□□□□ -1.08
MARK3-212ENST00000558223 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.32□□□□□ -1.08
MARK3-212ENST00000558223 FAM196AQ6ZSG2 479 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 ST13P5Q8NFI4 369 aaPredicted RBP8.32□□□□□ -1.08
MARK3-212ENST00000558223 ZNF274Q96GC6 653 aaPredicted RBP8.32□□□□□ -1.08
MARK3-212ENST00000558223 MTA3Q9BTC8 594 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 UTP14AQ9BVJ6 771 aaKnown RBP8.32□□□□□ -1.08
MARK3-212ENST00000558223 AGXT2Q9BYV1 514 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 CNNM1Q9NRU3 951 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 ZIM2Q9NZV7 527 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 ZMYM5Q9UJ78 669 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 CFAP45Q9UL16 551 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 CARMIL3Q8ND23 1372 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 NUP188Q5SRE5 1749 aa8.32□□□□□ -1.08
MARK3-212ENST00000558223 AFDNP55196 1824 aaKnown RBP8.31□□□□□ -1.08
MARK3-212ENST00000558223 CAVIN2O95810 425 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 HSPD1P10809 573 aaKnown RBP8.31□□□□□ -1.08
MARK3-212ENST00000558223 SLC5A1P13866 664 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 GNAT2P19087 354 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 EVCP57679 992 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 TRDNQ13061 729 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 ME3Q16798 604 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 ADCK5Q3MIX3 580 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 LRRC24Q50LG9 513 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 TMEM67Q5HYA8 995 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 CCDC183Q5T5S1 534 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 DDX46Q7L014 1031 aaKnown RBP8.31□□□□□ -1.08
MARK3-212ENST00000558223 CCDC83Q8IWF9 413 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 CMTR1Q8N1G2 835 aaKnown RBP8.31□□□□□ -1.08
MARK3-212ENST00000558223 MPNDQ8N594 471 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 TTC8Q8TAM2 541 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 FAM89AQ96GI7 184 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 PPP1R9BQ96SB3 815 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 SENP2Q9HC62 589 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 TMEM63CQ9P1W3 806 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 MTMR6Q9Y217 621 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 BCS1LQ9Y276 419 aa8.31□□□□□ -1.08
MARK3-212ENST00000558223 SHANK3Q9BYB0 1731 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 A0A087X0B3 334 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 LOC102724428A0A0B4J2F2 783 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 TGFBR3LH3BV60 316 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 EREGO14944 169 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 TLR3O15455 904 aaKnown RBP8.3□□□□□ -1.08
MARK3-212ENST00000558223 CAPN5O15484 640 aaPredicted RBP8.3□□□□□ -1.08
MARK3-212ENST00000558223 PFKFB2O60825 505 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 FBXO24O75426 580 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 FGAP02671 866 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 CYP21A2P08686 494 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 BDNFP23560 247 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 FSHRP23945 695 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 IGHMBP2P38935 993 aaKnown RBP8.3□□□□□ -1.08
MARK3-212ENST00000558223 ZNF165P49910 485 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 NEK2P51955 445 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 SIK1P57059 783 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 INSM1Q01101 510 aaPredicted RBP8.3□□□□□ -1.08
MARK3-212ENST00000558223 PKP1Q13835 747 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 ALX1Q15699 326 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 C10orf62Q5T681 223 aaPredicted RBP8.3□□□□□ -1.08
MARK3-212ENST00000558223 TTC39BQ5VTQ0 682 aaPredicted RBP8.3□□□□□ -1.08
MARK3-212ENST00000558223 NAA16Q6N069 864 aaPredicted RBP8.3□□□□□ -1.08
MARK3-212ENST00000558223 DTHD1Q6ZMT9 781 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 TRIM46Q7Z4K8 759 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 ZNF589Q86UQ0 364 aaPredicted RBP8.3□□□□□ -1.08
MARK3-212ENST00000558223 AMOTL1Q8IY63 956 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 JARID2Q92833 1246 aaPredicted RBP8.3□□□□□ -1.08
MARK3-212ENST00000558223 GTF3C6Q969F1 213 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 PMEPA1Q969W9 287 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 SYTL4Q96C24 671 aaPredicted RBP8.3□□□□□ -1.08
MARK3-212ENST00000558223 MPHOSPH8Q99549 860 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 OXCT2Q9BYC2 517 aaPredicted RBP8.3□□□□□ -1.08
MARK3-212ENST00000558223 TNKS2Q9H2K2 1166 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms