RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 CRBNQ96SW2 442 aa7.13□□□□□ -1.27
TRPM1-204ENST00000557948 HINFPQ9BQA5 517 aa7.13□□□□□ -1.27
TRPM1-204ENST00000557948 FTOQ9C0B1 505 aaKnown RBP eCLIP7.13□□□□□ -1.27
TRPM1-204ENST00000557948 SPATC1LQ9H0A9 340 aa7.13□□□□□ -1.27
TRPM1-204ENST00000557948 TRPV6Q9H1D0 765 aa7.13□□□□□ -1.27
TRPM1-204ENST00000557948 PDCL3Q9H2J4 239 aa7.13□□□□□ -1.27
TRPM1-204ENST00000557948 MROH8Q9H579 483 aa7.13□□□□□ -1.27
TRPM1-204ENST00000557948 KIF16BQ96L93 1317 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 MAST4O15021 2626 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 NCK2O43639 380 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 B4GALT4O60513 344 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 PDE8BO95263 885 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 GDF11O95390 407 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 VCAM1P19320 739 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 USP14P54578 494 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 DMWDQ09019 674 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 SMAD4Q13485 552 aaKnown RBP7.12□□□□□ -1.27
TRPM1-204ENST00000557948 RSPO4Q2I0M5 234 aaPredicted RBP7.12□□□□□ -1.27
TRPM1-204ENST00000557948 TCEAL5Q5H9L2 206 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 KIAA0319Q5VV43 1072 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 RPAINQ86UA6 219 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 LINS1Q8NG48 757 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 TSC1Q92574 1164 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 MAP7D2Q96T17 732 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 STK31Q9BXU1 1019 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 TRIM34Q9BYJ4 488 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 GINM1Q9NU53 330 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 ZHX1Q9UKY1 873 aaPredicted RBP7.12□□□□□ -1.27
TRPM1-204ENST00000557948 ZBTB21Q9ULJ3 1066 aa7.12□□□□□ -1.27
TRPM1-204ENST00000557948 GCN1Q92616 2671 aaKnown RBP7.11□□□□□ -1.27
TRPM1-204ENST00000557948 MYO7AQ13402 2215 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 TNKSO95271 1327 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 LINC01553A4QN01 128 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 SOBPA7XYQ1 873 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 POM121CA8CG34 1229 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 CFAP99D6REC4 459 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 BAIAP3O94812 1187 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 PDGFBP01127 241 aaPredicted RBP7.11□□□□□ -1.27
TRPM1-204ENST00000557948 LMNAP02545 664 aaKnown RBP7.11□□□□□ -1.27
TRPM1-204ENST00000557948 PGK2P07205 417 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 RFC2P35250 354 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 JAG1P78504 1218 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 ITGA7Q13683 1181 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 AAMPQ13685 434 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 COL19A1Q14993 1142 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 SHROOM1Q2M3G4 852 aaPredicted RBP7.11□□□□□ -1.27
TRPM1-204ENST00000557948 ZGPATQ8N5A5 531 aaKnown RBP7.11□□□□□ -1.27
TRPM1-204ENST00000557948 SLC43A3Q8NBI5 491 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 TET1Q8NFU7 2136 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 ZFRQ96KR1 1074 aaKnown RBP7.11□□□□□ -1.27
TRPM1-204ENST00000557948 RIPOR3Q96MK2 946 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 HS3ST6Q96QI5 342 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 MMP19Q99542 508 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 RAD9AQ99638 391 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 SEZ6LQ9BYH1 1024 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 SIL1Q9H173 461 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 NSUN3Q9H649 340 aaKnown RBP7.11□□□□□ -1.27
TRPM1-204ENST00000557948 RPAP3Q9H6T3 665 aaPredicted RBP7.11□□□□□ -1.27
TRPM1-204ENST00000557948 PLSCR2Q9NRY7 297 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 PI4KBQ9UBF8 816 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 ISY1Q9ULR0 285 aaKnown RBP7.11□□□□□ -1.27
TRPM1-204ENST00000557948 SIPA1L1O43166 1804 aa7.11□□□□□ -1.27
TRPM1-204ENST00000557948 SALL1Q9NSC2 1324 aa7.1□□□□□ -1.27
TRPM1-204ENST00000557948 CABYRO75952 493 aa7.1□□□□□ -1.27
TRPM1-204ENST00000557948 SDHBP21912 280 aa7.1□□□□□ -1.27
TRPM1-204ENST00000557948 LTBRP36941 435 aa7.1□□□□□ -1.27
TRPM1-204ENST00000557948 TERF1P54274 439 aa7.1□□□□□ -1.27
TRPM1-204ENST00000557948 GJA9P57773 515 aa7.1□□□□□ -1.27
TRPM1-204ENST00000557948 PUM3Q15397 648 aaKnown RBP7.1□□□□□ -1.27
TRPM1-204ENST00000557948 CXCL17Q6UXB2 119 aa7.1□□□□□ -1.27
TRPM1-204ENST00000557948 TMCO2Q7Z6W1 182 aaPredicted RBP7.1□□□□□ -1.27
TRPM1-204ENST00000557948 LAPTM4BQ86VI4 370 aa7.1□□□□□ -1.27
TRPM1-204ENST00000557948 CRACR2BQ8N4Y2 399 aaPredicted RBP7.1□□□□□ -1.27
TRPM1-204ENST00000557948 TMEM105Q8N8V8 129 aa7.1□□□□□ -1.27
TRPM1-204ENST00000557948 LRRN4Q8WUT4 740 aa7.1□□□□□ -1.27
TRPM1-204ENST00000557948 DNAAF4Q8WXU2 420 aa7.1□□□□□ -1.27
TRPM1-204ENST00000557948 FAM163AQ96GL9 167 aaPredicted RBP7.1□□□□□ -1.27
TRPM1-204ENST00000557948 UPF3AQ9H1J1 476 aaKnown RBP7.1□□□□□ -1.27
TRPM1-204ENST00000557948 GNL3LQ9NVN8 582 aaKnown RBP7.1□□□□□ -1.27
TRPM1-204ENST00000557948 HOXC10Q9NYD6 342 aa7.1□□□□□ -1.27
TRPM1-204ENST00000557948 CD207Q9UJ71 328 aa7.1□□□□□ -1.27
TRPM1-204ENST00000557948 DIS3Q9Y2L1 958 aaKnown RBP7.1□□□□□ -1.27
TRPM1-204ENST00000557948 ZFYVE26Q68DK2 2539 aa7.1□□□□□ -1.27
TRPM1-204ENST00000557948 TANC1Q9C0D5 1861 aa7.1□□□□□ -1.27
TRPM1-204ENST00000557948 ASH1LQ9NR48 2969 aaKnown RBP7.1□□□□□ -1.27
TRPM1-204ENST00000557948 MROH7-TTC4A0A0A0MT08 1334 aa7.09□□□□□ -1.27
TRPM1-204ENST00000557948 LOC730098B7Z3J9 87 aa7.09□□□□□ -1.27
TRPM1-204ENST00000557948 SUPT20HL2P0C7V6 817 aa7.09□□□□□ -1.27
TRPM1-204ENST00000557948 CYP2C9P11712 490 aa7.09□□□□□ -1.27
TRPM1-204ENST00000557948 SLC4A3P48751 1232 aa7.09□□□□□ -1.27
TRPM1-204ENST00000557948 RHBDL3P58872 404 aa7.09□□□□□ -1.27
TRPM1-204ENST00000557948 COL9A3Q14050 684 aaPredicted RBP7.09□□□□□ -1.27
TRPM1-204ENST00000557948 COG2Q14746 738 aa7.09□□□□□ -1.27
TRPM1-204ENST00000557948 ZNF792Q3KQV3 632 aa7.09□□□□□ -1.27
TRPM1-204ENST00000557948 LRRC24Q50LG9 513 aa7.09□□□□□ -1.27
TRPM1-204ENST00000557948 ZBTB33Q86T24 672 aa7.09□□□□□ -1.27
TRPM1-204ENST00000557948 MB21D1Q8N884 522 aa7.09□□□□□ -1.27
TRPM1-204ENST00000557948 VGLL2Q8N8G2 317 aa7.09□□□□□ -1.27
TRPM1-204ENST00000557948 C8orf58Q8NAV2 365 aa7.09□□□□□ -1.27
TRPM1-204ENST00000557948 C17orf80Q9BSJ5 609 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms