RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 LINC00528Q8N1L1 170 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 AGBL3Q8NEM8 1001 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 PIBF1Q8WXW3 757 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 TNFRSF25Q93038 417 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 PHF20Q9BVI0 1012 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 HDAC9Q9UKV0 1011 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 MTMR7Q9Y216 660 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 LTBP3Q9NS15 1303 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 CNTNAP1P78357 1384 aa8.49□□□□□ -1.05
SPG11-204ENST00000557866 ATRNL1Q5VV63 1379 aa8.49□□□□□ -1.05
SPG11-204ENST00000557866 USP17L5A8MUK1 530 aa8.49□□□□□ -1.05
SPG11-204ENST00000557866 TCP10L2B9ZVM9 353 aa8.49□□□□□ -1.05
SPG11-204ENST00000557866 YEATS4O95619 227 aa8.49□□□□□ -1.05
SPG11-204ENST00000557866 GOLGA8HP0CJ92 632 aa8.49□□□□□ -1.05
SPG11-204ENST00000557866 SNHG28P0DPA3 235 aa8.49□□□□□ -1.05
SPG11-204ENST00000557866 XRCC6P12956 609 aaKnown RBP eCLIP8.49□□□□□ -1.05
SPG11-204ENST00000557866 SCG2P13521 617 aa8.49□□□□□ -1.05
SPG11-204ENST00000557866 EIF6P56537 245 aaKnown RBP8.49□□□□□ -1.05
SPG11-204ENST00000557866 ZNF280AP59817 542 aaPredicted RBP8.49□□□□□ -1.05
SPG11-204ENST00000557866 INSM1Q01101 510 aaPredicted RBP8.49□□□□□ -1.05
SPG11-204ENST00000557866 PFKFB3Q16875 520 aaPredicted RBP8.49□□□□□ -1.05
SPG11-204ENST00000557866 NOM1Q5C9Z4 860 aaKnown RBP8.49□□□□□ -1.05
SPG11-204ENST00000557866 EARS2Q5JPH6 523 aaKnown RBP8.49□□□□□ -1.05
SPG11-204ENST00000557866 SIAH1Q8IUQ4 282 aa8.49□□□□□ -1.05
SPG11-204ENST00000557866 FOXP4Q8IVH2 680 aaPredicted RBP8.49□□□□□ -1.05
SPG11-204ENST00000557866 NOSTRINQ8IVI9 506 aa8.49□□□□□ -1.05
SPG11-204ENST00000557866 LRRC47Q8N1G4 583 aaKnown RBP8.49□□□□□ -1.05
SPG11-204ENST00000557866 IRF7Q92985 503 aa8.49□□□□□ -1.05
SPG11-204ENST00000557866 CCDC17Q96LX7 622 aa8.49□□□□□ -1.05
SPG11-204ENST00000557866 FOXP1Q9H334 677 aaPredicted RBP8.49□□□□□ -1.05
SPG11-204ENST00000557866 CPVLQ9H3G5 476 aa8.49□□□□□ -1.05
SPG11-204ENST00000557866 GOLPH3LQ9H4A5 285 aa8.49□□□□□ -1.05
SPG11-204ENST00000557866 PGAP2Q9UHJ9 254 aa8.49□□□□□ -1.05
SPG11-204ENST00000557866 PCDHA7Q9UN72 937 aa8.49□□□□□ -1.05
SPG11-204ENST00000557866 CDK5RAP2Q96SN8 1893 aa8.49□□□□□ -1.05
SPG11-204ENST00000557866 KLRF2D3W0D1 207 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 FZD9O00144 591 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 MAN1A2O60476 641 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 TTLL1O95922 423 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 EGFRP00533 1210 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 PARP1P09874 1014 aaKnown RBP8.48□□□□□ -1.05
SPG11-204ENST00000557866 PDHBP11177 359 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 SLC39A14Q15043 492 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 STK38Q15208 465 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 SAFBQ15424 915 aaKnown RBP eCLIP8.48□□□□□ -1.05
SPG11-204ENST00000557866 SF3A1Q15459 793 aaKnown RBP8.48□□□□□ -1.05
SPG11-204ENST00000557866 NBPF20Q3BBV1 942 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 NBPF9Q3BBW0 867 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 CERKLQ49MI3 558 aaPredicted RBP8.48□□□□□ -1.05
SPG11-204ENST00000557866 AXDND1Q5T1B0 1012 aaPredicted RBP8.48□□□□□ -1.05
SPG11-204ENST00000557866 LRSAM1Q6UWE0 723 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 ZSCAN29Q8IWY8 852 aaPredicted RBP8.48□□□□□ -1.05
SPG11-204ENST00000557866 OGFOD1Q8N543 542 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 FAM151AQ8WW52 585 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 JDP2Q8WYK2 163 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 SYAP1Q96A49 352 aaPredicted RBP8.48□□□□□ -1.05
SPG11-204ENST00000557866 LZTS2Q9BRK4 669 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 FUCA2Q9BTY2 467 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 SPZ1Q9BXG8 430 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 RBSNQ9H1K0 784 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 DACT1Q9NYF0 836 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 CLIP2Q9UDT6 1046 aa8.48□□□□□ -1.05
SPG11-204ENST00000557866 COL2A1P02458 1487 aaPredicted RBP8.48□□□□□ -1.05
SPG11-204ENST00000557866 H3BM21 787 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 STXBP3O00186 592 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 MPHOSPH10O00566 681 aaKnown RBP8.47□□□□□ -1.05
SPG11-204ENST00000557866 WNT10BO00744 389 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 SPTLC2O15270 562 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 GDF11O95390 407 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 EEF2P13639 858 aaKnown RBP8.47□□□□□ -1.05
SPG11-204ENST00000557866 KRT2P35908 639 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 ZNF543Q08ER8 600 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 SNW1Q13573 536 aaKnown RBP8.47□□□□□ -1.05
SPG11-204ENST00000557866 SEPT2Q15019 361 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 TNIP1Q15025 636 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 INTS6LQ5JSJ4 861 aaKnown RBP8.47□□□□□ -1.05
SPG11-204ENST00000557866 FKBP1CQ5VVH2 108 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 WWC2Q6AWC2 1192 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 Q6ZVU0 165 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 CCAR1Q8IX12 1150 aaKnown RBP8.47□□□□□ -1.05
SPG11-204ENST00000557866 ENGASEQ8NFI3 743 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 BICD2Q8TD16 824 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 KCNG4Q8TDN1 519 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 MKL1Q969V6 931 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 CSRNP1Q96S65 589 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 TRIM34Q9BYJ4 488 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 UBA5Q9GZZ9 404 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 CLSTN2Q9H4D0 955 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 RIOX1Q9H6W3 641 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 GRPEL1Q9HAV7 217 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 MYOZ2Q9NPC6 264 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 STK17AQ9UEE5 414 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 ISY1Q9ULR0 285 aaKnown RBP8.47□□□□□ -1.05
SPG11-204ENST00000557866 FRMPD2Q68DX3 1309 aaPredicted RBP8.47□□□□□ -1.05
SPG11-204ENST00000557866 FOCADQ5VW36 1801 aa8.47□□□□□ -1.05
SPG11-204ENST00000557866 A0A1W2PQ27 194 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 A0A1W2PQ64 194 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 A0A1W2PQD8 194 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 GOLGA6L4A6NEF3 574 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 M0R2N6 131 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms