RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ITIH2P19823 946 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 BDNFP23560 247 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 MAN1A1P33908 653 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 BAG6P46379 1132 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 ZNF445P59923 1031 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 GPR85P60893 370 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 CHAF1AQ13111 956 aaPredicted RBP4.73□□□□□ -1.65
TDP1-217ENST00000557782 SLBPQ14493 270 aaKnown RBP eCLIP4.73□□□□□ -1.65
TDP1-217ENST00000557782 GRIK5Q16478 980 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 DDB1Q16531 1140 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 PRSS53Q2L4Q9 553 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 ALFQ53S48 1182 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 EXOSC6Q5RKV6 272 aaKnown RBP4.73□□□□□ -1.65
TDP1-217ENST00000557782 EFCAB2Q5VUJ9 269 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 ABHD17CQ6PCB6 329 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 C1orf228Q6PIY5 440 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 CATIPQ7Z7H3 387 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 ZNF354CQ86Y25 554 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 WFDC8Q8IUA0 241 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 MAP4K3Q8IVH8 894 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 AMOTL1Q8IY63 956 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 FIBCD1Q8N539 461 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 MFSD2AQ8NA29 543 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 TEX19Q8NA77 164 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 ACRBPQ8NEB7 543 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 XAGE3Q8WTP9 111 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 CHTF18Q8WVB6 975 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 SLC5A5Q92911 643 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 KREMEN1Q96MU8 473 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 FANCD2OSQ96PS1 177 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 ALG1Q9BT22 464 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 DSCC1Q9BVC3 393 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 FOXQ1Q9C009 403 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 ZHX3Q9H4I2 956 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 ANLNQ9NQW6 1124 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 PRDM6Q9NQX0 595 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 DDX21Q9NR30 783 aaKnown RBP eCLIP4.73□□□□□ -1.65
TDP1-217ENST00000557782 SPTLC3Q9NUV7 552 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 KLHL11Q9NVR0 708 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 C14orf119Q9NWQ9 140 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 INVSQ9Y283 1065 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 GPR55Q9Y2T6 319 aaPredicted RBP4.73□□□□□ -1.65
TDP1-217ENST00000557782 CDC14CA4D256 554 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 WDR64B1ANS9 1081 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 ARVCFO00192 962 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 TRAF5O00463 557 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 COL6A1P12109 1028 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 MX2P20592 715 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 SERPINB3P29508 390 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 NTF4P34130 210 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 HALP42357 657 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 AK2P54819 239 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 STK3Q13188 491 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 SLC9A5Q14940 896 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 KRT72Q14CN4 511 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 FAM47CQ5HY64 1035 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 IFIT1BQ5T764 474 aaKnown RBP4.72□□□□□ -1.65
TDP1-217ENST00000557782 KCNT2Q6UVM3 1135 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 PODNQ7Z5L7 613 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 PPIL6Q8IXY8 311 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 FAM186BQ8IYM0 893 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 CLRN3Q8NCR9 226 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.72□□□□□ -1.65
TDP1-217ENST00000557782 PANK1Q8TE04 598 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 DCAF11Q8TEB1 546 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 RUNDC1Q96C34 613 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 ZDHHC15Q96MV8 337 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 PHF20Q9BVI0 1012 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 ASPNQ9BXN1 380 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 CELF4Q9BZC1 486 aaKnown RBP4.72□□□□□ -1.65
TDP1-217ENST00000557782 PIDD1Q9HB75 910 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 SSU72Q9NP77 194 aaKnown RBP4.72□□□□□ -1.65
TDP1-217ENST00000557782 VTA1Q9NP79 307 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 MAP3K20Q9NYL2 800 aaKnown RBP4.72□□□□□ -1.65
TDP1-217ENST00000557782 LUZP4Q9P127 313 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 ZNF69Q9UC07 566 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 DDX20Q9UHI6 824 aaKnown RBP4.72□□□□□ -1.65
TDP1-217ENST00000557782 PPP1R9AQ9ULJ8 1098 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 RNF112Q9ULX5 631 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 NSFL1CQ9UNZ2 370 aaKnown RBP4.72□□□□□ -1.65
TDP1-217ENST00000557782 AP4E1Q9UPM8 1137 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 CEP131Q9UPN4 1083 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 PPP2R3BQ9Y5P8 575 aa4.72□□□□□ -1.65
TDP1-217ENST00000557782 KLHL33A6NCF5 533 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 GSTA4O15217 222 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 MEFVO15553 781 aaPredicted RBP4.71□□□□□ -1.66
TDP1-217ENST00000557782 CTNND1O60716 968 aaKnown RBP4.71□□□□□ -1.66
TDP1-217ENST00000557782 LILRB5O75023 590 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 VAMP4O75379 141 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 OFD1O75665 1012 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 ATP2A2P16615 1042 aaKnown RBP4.71□□□□□ -1.66
TDP1-217ENST00000557782 AKAP5P24588 427 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 POU4F1Q01851 419 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 SCRN1Q12765 414 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 PAK1Q13153 545 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 TTLL4Q14679 1199 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 ARHGAP44Q17R89 818 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 TMEM177Q53S58 311 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 RRP12Q5JTH9 1297 aaKnown RBP4.71□□□□□ -1.66
TDP1-217ENST00000557782 KRBA2Q6ZNG9 492 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms