RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 SH3GLB2Q9NR46 395 aa15.79■□□□□ 0.12
SHMT2-234ENST00000557703 V9GY48 417 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-234ENST00000557703 KIAA0100Q14667 2235 aaKnown RBP15.79■□□□□ 0.12
SHMT2-234ENST00000557703 SMCHD1A6NHR9 2005 aa15.78■□□□□ 0.12
SHMT2-234ENST00000557703 PTPDC1A2A3K4 754 aa15.78■□□□□ 0.12
SHMT2-234ENST00000557703 GCOM1H8Y6P7 765 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-234ENST00000557703 NFIBO00712 420 aa15.78■□□□□ 0.12
SHMT2-234ENST00000557703 PPP1R11O60927 126 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-234ENST00000557703 POLR2MP0CAP2 368 aa15.78■□□□□ 0.12
SHMT2-234ENST00000557703 RPS6P62753 249 aaKnown RBP15.78■□□□□ 0.12
SHMT2-234ENST00000557703 SSRP1Q08945 709 aaKnown RBP15.78■□□□□ 0.12
SHMT2-234ENST00000557703 BAATQ14032 418 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-234ENST00000557703 PFKFB3Q16875 520 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-234ENST00000557703 NPLOC4Q8TAT6 608 aa15.78■□□□□ 0.12
SHMT2-234ENST00000557703 MORC4Q8TE76 937 aa15.78■□□□□ 0.12
SHMT2-234ENST00000557703 TRIB2Q92519 343 aa15.78■□□□□ 0.12
SHMT2-234ENST00000557703 WASF1Q92558 559 aa15.78■□□□□ 0.12
SHMT2-234ENST00000557703 CUL5Q93034 780 aa15.78■□□□□ 0.12
SHMT2-234ENST00000557703 TMEM106CQ9BVX2 250 aa15.78■□□□□ 0.12
SHMT2-234ENST00000557703 ABHD16BQ9H3Z7 469 aa15.78■□□□□ 0.12
SHMT2-234ENST00000557703 BARHL2Q9NY43 387 aa15.78■□□□□ 0.12
SHMT2-234ENST00000557703 TPCN1Q9ULQ1 816 aa15.78■□□□□ 0.12
SHMT2-234ENST00000557703 CNPY2Q9Y2B0 182 aa15.78■□□□□ 0.12
SHMT2-234ENST00000557703 ZSWIM8A7E2V4 1837 aa15.78■□□□□ 0.12
SHMT2-234ENST00000557703 ESYT2A0FGR8 921 aa15.77■□□□□ 0.12
SHMT2-234ENST00000557703 DEXIO95424 95 aa15.77■□□□□ 0.12
SHMT2-234ENST00000557703 INHAP05111 366 aa15.77■□□□□ 0.12
SHMT2-234ENST00000557703 PGK2P07205 417 aa15.77■□□□□ 0.12
SHMT2-234ENST00000557703 SCG2P13521 617 aa15.77■□□□□ 0.12
SHMT2-234ENST00000557703 XBP1P17861 261 aa15.77■□□□□ 0.12
SHMT2-234ENST00000557703 CCT2P78371 535 aaKnown RBP15.77■□□□□ 0.12
SHMT2-234ENST00000557703 CCDC82Q8N4S0 544 aa15.77■□□□□ 0.12
SHMT2-234ENST00000557703 CCDC148Q8NFR7 591 aa15.77■□□□□ 0.12
SHMT2-234ENST00000557703 NSUN6Q8TEA1 469 aaKnown RBP15.77■□□□□ 0.12
SHMT2-234ENST00000557703 LLPHQ9BRT6 129 aaKnown RBP15.77■□□□□ 0.12
SHMT2-234ENST00000557703 PSTPIP2Q9H939 334 aa15.77■□□□□ 0.12
SHMT2-234ENST00000557703 STK36Q9NRP7 1315 aa15.76■□□□□ 0.11
SHMT2-234ENST00000557703 ECM2O94769 699 aaPredicted RBP15.76■□□□□ 0.11
SHMT2-234ENST00000557703 FOSP01100 380 aaPredicted RBP15.76■□□□□ 0.11
SHMT2-234ENST00000557703 ELNP15502 786 aa15.76■□□□□ 0.11
SHMT2-234ENST00000557703 GNA11P29992 359 aa15.76■□□□□ 0.11
SHMT2-234ENST00000557703 SCRN1Q12765 414 aa15.76■□□□□ 0.11
SHMT2-234ENST00000557703 GALNT17Q6IS24 598 aa15.76■□□□□ 0.11
SHMT2-234ENST00000557703 XRRA1Q6P2D8 792 aa15.76■□□□□ 0.11
SHMT2-234ENST00000557703 RAB11FIP4Q86YS3 637 aa15.76■□□□□ 0.11
SHMT2-234ENST00000557703 CMTR1Q8N1G2 835 aaKnown RBP15.76■□□□□ 0.11
SHMT2-234ENST00000557703 BICD2Q8TD16 824 aa15.76■□□□□ 0.11
SHMT2-234ENST00000557703 GTF3C6Q969F1 213 aa15.76■□□□□ 0.11
SHMT2-234ENST00000557703 STAM2O75886 525 aa15.75■□□□□ 0.11
SHMT2-234ENST00000557703 CFBP00751 764 aa15.75■□□□□ 0.11
SHMT2-234ENST00000557703 GJB1P08034 283 aa15.75■□□□□ 0.11
SHMT2-234ENST00000557703 PRKAR2AP13861 404 aaKnown RBP15.75■□□□□ 0.11
SHMT2-234ENST00000557703 CACNB2Q08289 660 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-234ENST00000557703 ME3Q16798 604 aa15.75■□□□□ 0.11
SHMT2-234ENST00000557703 HEATR3Q7Z4Q2 680 aa15.75■□□□□ 0.11
SHMT2-234ENST00000557703 SYTL5Q8TDW5 730 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-234ENST00000557703 SH3TC2Q8TF17 1288 aa15.75■□□□□ 0.11
SHMT2-234ENST00000557703 EHMT1Q9H9B1 1298 aa15.75■□□□□ 0.11
SHMT2-234ENST00000557703 PAK6Q9NQU5 681 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-234ENST00000557703 PLXNA1Q9UIW2 1896 aa15.75■□□□□ 0.11
SHMT2-234ENST00000557703 CENPFP49454 3210 aa15.74■□□□□ 0.11
SHMT2-234ENST00000557703 OPLAHO14841 1288 aa15.74■□□□□ 0.11
SHMT2-234ENST00000557703 CYBAP13498 195 aa15.74■□□□□ 0.11
SHMT2-234ENST00000557703 EDNRBP24530 442 aa15.74■□□□□ 0.11
SHMT2-234ENST00000557703 CALML3P27482 149 aa15.74■□□□□ 0.11
SHMT2-234ENST00000557703 ALDH5A1P51649 535 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-234ENST00000557703 NAPAP54920 295 aa15.74■□□□□ 0.11
SHMT2-234ENST00000557703 CNTN2Q02246 1040 aa15.74■□□□□ 0.11
SHMT2-234ENST00000557703 CCL14Q16627 93 aa15.74■□□□□ 0.11
SHMT2-234ENST00000557703 RMDN3Q96TC7 470 aa15.74■□□□□ 0.11
SHMT2-234ENST00000557703 ZMYND12Q9H0C1 365 aa15.74■□□□□ 0.11
SHMT2-234ENST00000557703 RNF208Q9H0X6 261 aa15.74■□□□□ 0.11
SHMT2-234ENST00000557703 NCOA5Q9HCD5 579 aaKnown RBP15.74■□□□□ 0.11
SHMT2-234ENST00000557703 C6orf50Q9HD87 102 aa15.74■□□□□ 0.11
SHMT2-234ENST00000557703 VTA1Q9NP79 307 aa15.74■□□□□ 0.11
SHMT2-234ENST00000557703 RIC8AQ9NPQ8 531 aa15.74■□□□□ 0.11
SHMT2-234ENST00000557703 FLRT1Q9NZU1 646 aa15.74■□□□□ 0.11
SHMT2-234ENST00000557703 SOWAHBA6NEL2 793 aa15.73■□□□□ 0.11
SHMT2-234ENST00000557703 STXBP3O00186 592 aa15.73■□□□□ 0.11
SHMT2-234ENST00000557703 SEPT4O43236 478 aa15.73■□□□□ 0.11
SHMT2-234ENST00000557703 CCL5P13501 91 aa15.73■□□□□ 0.11
SHMT2-234ENST00000557703 HMGN5P82970 282 aaKnown RBP15.73■□□□□ 0.11
SHMT2-234ENST00000557703 STK3Q13188 491 aa15.73■□□□□ 0.11
SHMT2-234ENST00000557703 AP3B2Q13367 1082 aa15.73■□□□□ 0.11
SHMT2-234ENST00000557703 PKN1Q16512 942 aa15.73■□□□□ 0.11
SHMT2-234ENST00000557703 WWC2Q6AWC2 1192 aa15.73■□□□□ 0.11
SHMT2-234ENST00000557703 ARMCX2Q7L311 632 aa15.73■□□□□ 0.11
SHMT2-234ENST00000557703 SMARCC2Q8TAQ2 1214 aa15.73■□□□□ 0.11
SHMT2-234ENST00000557703 PIBF1Q8WXW3 757 aa15.73■□□□□ 0.11
SHMT2-234ENST00000557703 FGD4Q96M96 766 aa15.73■□□□□ 0.11
SHMT2-234ENST00000557703 SLC26A6Q9BXS9 759 aa15.73■□□□□ 0.11
SHMT2-234ENST00000557703 MEIS2O14770 477 aa15.72■□□□□ 0.11
SHMT2-234ENST00000557703 EIF3JO75822 258 aaKnown RBP15.72■□□□□ 0.11
SHMT2-234ENST00000557703 SNAI1O95863 264 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-234ENST00000557703 CYP2C19P33261 490 aa15.72■□□□□ 0.11
SHMT2-234ENST00000557703 GJA8P48165 433 aa15.72■□□□□ 0.11
SHMT2-234ENST00000557703 ACVR2BQ13705 512 aa15.72■□□□□ 0.11
SHMT2-234ENST00000557703 STXBP2Q15833 593 aa15.72■□□□□ 0.11
SHMT2-234ENST00000557703 ARHGEF16Q5VV41 709 aa15.72■□□□□ 0.11
SHMT2-234ENST00000557703 IQSEC1Q6DN90 963 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms