RNA–Protein interactions for RNA: ENST00000557690.5

CNIH1-207, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 3 BASIC

Gene CNIH1, Length 838 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-207ENST00000557690 ICAM1P05362 532 aa13□□□□□ -0.33
CNIH1-207ENST00000557690 SLC16A2P36021 539 aa13□□□□□ -0.33
CNIH1-207ENST00000557690 EPHB4P54760 987 aa13□□□□□ -0.33
CNIH1-207ENST00000557690 MFAP1P55081 439 aaKnown RBP13□□□□□ -0.33
CNIH1-207ENST00000557690 SMAD3P84022 425 aaKnown RBP13□□□□□ -0.33
CNIH1-207ENST00000557690 BEX3Q00994 111 aa13□□□□□ -0.33
CNIH1-207ENST00000557690 AAMPQ13685 434 aa13□□□□□ -0.33
CNIH1-207ENST00000557690 SYDE2Q5VT97 1194 aa13□□□□□ -0.33
CNIH1-207ENST00000557690 TTBK2Q6IQ55 1244 aa13□□□□□ -0.33
CNIH1-207ENST00000557690 TLK2Q86UE8 772 aa13□□□□□ -0.33
CNIH1-207ENST00000557690 TMEM47Q9BQJ4 181 aa13□□□□□ -0.33
CNIH1-207ENST00000557690 RANBP17Q9H2T7 1088 aaKnown RBP13□□□□□ -0.33
CNIH1-207ENST00000557690 RWDD1Q9H446 243 aaPredicted RBP13□□□□□ -0.33
CNIH1-207ENST00000557690 GPCPD1Q9NPB8 672 aa13□□□□□ -0.33
CNIH1-207ENST00000557690 DDX49Q9Y6V7 483 aaKnown RBP13□□□□□ -0.33
CNIH1-207ENST00000557690 CHD7Q9P2D1 2997 aa13□□□□□ -0.33
CNIH1-207ENST00000557690 DOCK5Q9H7D0 1870 aa12.99□□□□□ -0.33
CNIH1-207ENST00000557690 ARVCFO00192 962 aa12.99□□□□□ -0.33
CNIH1-207ENST00000557690 TLR3O15455 904 aaKnown RBP12.99□□□□□ -0.33
CNIH1-207ENST00000557690 TIMP1P01033 207 aa12.99□□□□□ -0.33
CNIH1-207ENST00000557690 CDK7P50613 346 aa12.99□□□□□ -0.33
CNIH1-207ENST00000557690 AKNAD1Q5T1N1 836 aa12.99□□□□□ -0.33
CNIH1-207ENST00000557690 BTNL9Q6UXG8 535 aa12.99□□□□□ -0.33
CNIH1-207ENST00000557690 MFSD6Q6ZSS7 791 aa12.99□□□□□ -0.33
CNIH1-207ENST00000557690 EEPD1Q7L9B9 569 aa12.99□□□□□ -0.33
CNIH1-207ENST00000557690 FBXO16Q8IX29 292 aaPredicted RBP12.99□□□□□ -0.33
CNIH1-207ENST00000557690 SMC5Q8IY18 1101 aa12.99□□□□□ -0.33
CNIH1-207ENST00000557690 AP5M1Q9H0R1 490 aa12.99□□□□□ -0.33
CNIH1-207ENST00000557690 TCP11L1Q9NUJ3 509 aa12.99□□□□□ -0.33
CNIH1-207ENST00000557690 TBX21Q9UL17 535 aa12.99□□□□□ -0.33
CNIH1-207ENST00000557690 CTAGE5O15320 804 aa12.98□□□□□ -0.33
CNIH1-207ENST00000557690 FSCN1Q16658 493 aaKnown RBP12.98□□□□□ -0.33
CNIH1-207ENST00000557690 MARVELD3Q96A59 401 aa12.98□□□□□ -0.33
CNIH1-207ENST00000557690 SEMA6BQ9H3T3 888 aa12.98□□□□□ -0.33
CNIH1-207ENST00000557690 VTA1Q9NP79 307 aa12.98□□□□□ -0.33
CNIH1-207ENST00000557690 PDGFCQ9NRA1 345 aa12.98□□□□□ -0.33
CNIH1-207ENST00000557690 GNEQ9Y223 722 aaKnown RBP12.98□□□□□ -0.33
CNIH1-207ENST00000557690 PTPRSQ13332 1948 aa12.98□□□□□ -0.33
CNIH1-207ENST00000557690 NEDD4P46934 1319 aa12.97□□□□□ -0.33
CNIH1-207ENST00000557690 KAT6AQ92794 2004 aa12.97□□□□□ -0.33
CNIH1-207ENST00000557690 PTPDC1A2A3K4 754 aa12.97□□□□□ -0.33
CNIH1-207ENST00000557690 NFIBO00712 420 aa12.97□□□□□ -0.33
CNIH1-207ENST00000557690 DYNC1LI2O43237 492 aaPredicted RBP12.97□□□□□ -0.33
CNIH1-207ENST00000557690 PDHBP11177 359 aa12.97□□□□□ -0.33
CNIH1-207ENST00000557690 PCP11498 1178 aaKnown RBP12.97□□□□□ -0.33
CNIH1-207ENST00000557690 SMPD1P17405 629 aa12.97□□□□□ -0.33
CNIH1-207ENST00000557690 SDSP20132 328 aa12.97□□□□□ -0.33
CNIH1-207ENST00000557690 NKX3-2P78367 333 aa12.97□□□□□ -0.33
CNIH1-207ENST00000557690 PPIGQ13427 754 aaKnown RBP eCLIP12.97□□□□□ -0.33
CNIH1-207ENST00000557690 BAATQ14032 418 aaPredicted RBP12.97□□□□□ -0.33
CNIH1-207ENST00000557690 IQSEC1Q6DN90 963 aa12.97□□□□□ -0.33
CNIH1-207ENST00000557690 MFSD5Q6N075 450 aa12.97□□□□□ -0.33
CNIH1-207ENST00000557690 TAPT1Q6NXT6 567 aa12.97□□□□□ -0.33
CNIH1-207ENST00000557690 CXCL17Q6UXB2 119 aa12.97□□□□□ -0.33
CNIH1-207ENST00000557690 CHD1LQ86WJ1 897 aa12.97□□□□□ -0.33
CNIH1-207ENST00000557690 TBC1D10CQ8IV04 446 aa12.97□□□□□ -0.33
CNIH1-207ENST00000557690 PLEKHM2Q8IWE5 1019 aa12.97□□□□□ -0.33
CNIH1-207ENST00000557690 FAM126BQ8IXS8 530 aa12.97□□□□□ -0.33
CNIH1-207ENST00000557690 PURBQ96QR8 312 aaKnown RBP12.97□□□□□ -0.33
CNIH1-207ENST00000557690 CDX2Q99626 313 aaPredicted RBP12.97□□□□□ -0.33
CNIH1-207ENST00000557690 PPP1R12CQ9BZL4 782 aa12.97□□□□□ -0.33
CNIH1-207ENST00000557690 TTYH1Q9H313 450 aaPredicted RBP12.97□□□□□ -0.33
CNIH1-207ENST00000557690 RNF41Q9H4P4 317 aaPredicted RBP12.97□□□□□ -0.33
CNIH1-207ENST00000557690 ADD3Q9UEY8 706 aaKnown RBP12.97□□□□□ -0.33
CNIH1-207ENST00000557690 ZEB2O60315 1214 aa12.96□□□□□ -0.33
CNIH1-207ENST00000557690 CABYRO75952 493 aa12.96□□□□□ -0.33
CNIH1-207ENST00000557690 IGHDP01880 384 aa12.96□□□□□ -0.33
CNIH1-207ENST00000557690 PTGS1P23219 599 aa12.96□□□□□ -0.33
CNIH1-207ENST00000557690 ALDH5A1P51649 535 aaPredicted RBP12.96□□□□□ -0.33
CNIH1-207ENST00000557690 NUCB1Q02818 461 aa12.96□□□□□ -0.33
CNIH1-207ENST00000557690 ZNF543Q08ER8 600 aa12.96□□□□□ -0.33
CNIH1-207ENST00000557690 CWC27Q6UX04 472 aaKnown RBP12.96□□□□□ -0.33
CNIH1-207ENST00000557690 KIAA1211Q6ZU35 1233 aa12.96□□□□□ -0.33
CNIH1-207ENST00000557690 TMEM199Q8N511 208 aa12.96□□□□□ -0.33
CNIH1-207ENST00000557690 TET1Q8NFU7 2136 aa12.96□□□□□ -0.33
CNIH1-207ENST00000557690 ESR2Q92731 530 aa12.96□□□□□ -0.33
CNIH1-207ENST00000557690 TTC14Q96N46 770 aa12.96□□□□□ -0.33
CNIH1-207ENST00000557690 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.96□□□□□ -0.335e-8■□□□□ 8.8
CNIH1-207ENST00000557690 ZKSCAN3Q9BRR0 538 aa12.96□□□□□ -0.33
CNIH1-207ENST00000557690 DIAPH3Q9NSV4 1193 aa12.96□□□□□ -0.33
CNIH1-207ENST00000557690 ZNF213O14771 459 aa12.95□□□□□ -0.34
CNIH1-207ENST00000557690 CD4P01730 458 aa12.95□□□□□ -0.34
CNIH1-207ENST00000557690 CSF2RAP15509 400 aa12.95□□□□□ -0.34
CNIH1-207ENST00000557690 CALML3P27482 149 aa12.95□□□□□ -0.34
CNIH1-207ENST00000557690 ITGA7Q13683 1181 aa12.95□□□□□ -0.34
CNIH1-207ENST00000557690 TMEM63BQ5T3F8 832 aa12.95□□□□□ -0.34
CNIH1-207ENST00000557690 SLC30A10Q6XR72 485 aa12.95□□□□□ -0.34
CNIH1-207ENST00000557690 EXOC6Q8TAG9 804 aa12.95□□□□□ -0.34
CNIH1-207ENST00000557690 MORC4Q8TE76 937 aa12.95□□□□□ -0.34
CNIH1-207ENST00000557690 MYLIPQ8WY64 445 aa12.95□□□□□ -0.34
CNIH1-207ENST00000557690 OSBPL3Q9H4L5 887 aa12.95□□□□□ -0.34
CNIH1-207ENST00000557690 PNMA2Q9UL42 364 aa12.95□□□□□ -0.34
CNIH1-207ENST00000557690 Q9Y3F1 56 aa12.95□□□□□ -0.34
CNIH1-207ENST00000557690 SPTBN5Q9NRC6 3674 aaKnown RBP12.95□□□□□ -0.34
CNIH1-207ENST00000557690 TMEM265A0A087WTH1 108 aa12.94□□□□□ -0.34
CNIH1-207ENST00000557690 LOC102724159A0A0B4J2E5 919 aa12.94□□□□□ -0.34
CNIH1-207ENST00000557690 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.94□□□□□ -0.34
CNIH1-207ENST00000557690 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.94□□□□□ -0.34
CNIH1-207ENST00000557690 HIP1O00291 1037 aa12.94□□□□□ -0.34
CNIH1-207ENST00000557690 SNHG28P0DPA3 235 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms