RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 EPHX1P07099 455 aa4.84□□□□□ -1.63
GPHN-216ENST00000557678 NCAM1P13591 858 aa4.84□□□□□ -1.63
GPHN-216ENST00000557678 CORO7P57737 925 aa4.84□□□□□ -1.63
GPHN-216ENST00000557678 AMPD2Q01433 879 aa4.84□□□□□ -1.63
GPHN-216ENST00000557678 EEF1DP3Q658K8 133 aa4.84□□□□□ -1.63
GPHN-216ENST00000557678 CPNE8Q86YQ8 564 aa4.84□□□□□ -1.63
GPHN-216ENST00000557678 LZTR1Q8N653 840 aa4.84□□□□□ -1.63
GPHN-216ENST00000557678 CXorf38Q8TB03 319 aa4.84□□□□□ -1.63
GPHN-216ENST00000557678 GPRASP2Q96D09 838 aa4.84□□□□□ -1.63
GPHN-216ENST00000557678 BCAS3Q9H6U6 928 aa4.84□□□□□ -1.63
GPHN-216ENST00000557678 NUDT5Q9UKK9 219 aa4.84□□□□□ -1.63
GPHN-216ENST00000557678 PLA2G2DQ9UNK4 145 aa4.84□□□□□ -1.63
GPHN-216ENST00000557678 IRS2Q9Y4H2 1338 aa4.83□□□□□ -1.64
GPHN-216ENST00000557678 A0A1B0GTL3 188 aa4.83□□□□□ -1.64
GPHN-216ENST00000557678 FFAR3O14843 346 aa4.83□□□□□ -1.64
GPHN-216ENST00000557678 IGFBP6P24592 240 aaPredicted RBP4.83□□□□□ -1.64
GPHN-216ENST00000557678 MC3RP41968 323 aa4.83□□□□□ -1.64
GPHN-216ENST00000557678 SLURP1P55000 103 aa4.83□□□□□ -1.64
GPHN-216ENST00000557678 PLP2Q04941 152 aa4.83□□□□□ -1.64
GPHN-216ENST00000557678 C9orf131Q5VYM1 1079 aa4.83□□□□□ -1.64
GPHN-216ENST00000557678 RCSD1Q6JBY9 416 aa4.83□□□□□ -1.64
GPHN-216ENST00000557678 PPP1R14AQ96A00 147 aa4.83□□□□□ -1.64
GPHN-216ENST00000557678 SPATA32Q96LK8 384 aa4.83□□□□□ -1.64
GPHN-216ENST00000557678 BDH2Q9BUT1 245 aa4.83□□□□□ -1.64
GPHN-216ENST00000557678 BACE2Q9Y5Z0 518 aa4.83□□□□□ -1.64
GPHN-216ENST00000557678 NPHP3-ACAD11A0A0J9YXS1 232 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 A0A1W2PQH9 124 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 AURKAO14965 403 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 ASGR2P07307 311 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 ATF2P15336 505 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 PAMP19021 973 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 UBXN11Q5T124 520 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 NT5DC1Q5TFE4 455 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 KIAA1211LQ6NV74 962 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 TP53I13Q8NBR0 393 aaPredicted RBP4.82□□□□□ -1.64
GPHN-216ENST00000557678 NLGN2Q8NFZ4 835 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 OR6P1Q8NGX9 317 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 FNIP1Q8TF40 1166 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 TEPSINQ96N21 525 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 SPATA25Q9BR10 227 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 MCMBPQ9BTE3 642 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 KLHL25Q9H0H3 589 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 BTG4Q9NY30 223 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 GULP1Q9UBP9 304 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 CGGBP1Q9UFW8 167 aaPredicted RBP4.82□□□□□ -1.64
GPHN-216ENST00000557678 AKT3Q9Y243 479 aa4.82□□□□□ -1.64
GPHN-216ENST00000557678 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.82□□□□□ -1.64
GPHN-216ENST00000557678 NPHS1O60500 1241 aa4.81□□□□□ -1.64
GPHN-216ENST00000557678 RECKO95980 971 aa4.81□□□□□ -1.64
GPHN-216ENST00000557678 PLA2G1BP04054 148 aaKnown RBP4.81□□□□□ -1.64
GPHN-216ENST00000557678 GLI4P10075 376 aa4.81□□□□□ -1.64
GPHN-216ENST00000557678 PMLP29590 882 aa4.81□□□□□ -1.64
GPHN-216ENST00000557678 SOX9P48436 509 aa4.81□□□□□ -1.64
GPHN-216ENST00000557678 GIPRP48546 466 aa4.81□□□□□ -1.64
GPHN-216ENST00000557678 NASPP49321 788 aaPredicted RBP4.81□□□□□ -1.64
GPHN-216ENST00000557678 KRTAP10-2P60368 255 aa4.81□□□□□ -1.64
GPHN-216ENST00000557678 SKOR2Q2VWA4 1001 aaPredicted RBP4.81□□□□□ -1.64
GPHN-216ENST00000557678 VHLLQ6RSH7 139 aa4.81□□□□□ -1.64
GPHN-216ENST00000557678 FRMD5Q7Z6J6 570 aa4.81□□□□□ -1.64
GPHN-216ENST00000557678 PEX11GQ96HA9 241 aa4.81□□□□□ -1.64
GPHN-216ENST00000557678 RNF38Q9H0F5 515 aa4.81□□□□□ -1.64
GPHN-216ENST00000557678 TRBV23OR9-2A0A075B6M9 112 aa4.8□□□□□ -1.64
GPHN-216ENST00000557678 NOP56O00567 594 aaKnown RBP4.8□□□□□ -1.64
GPHN-216ENST00000557678 KCNH1O95259 989 aa4.8□□□□□ -1.64
GPHN-216ENST00000557678 FUCA1P04066 466 aa4.8□□□□□ -1.64
GPHN-216ENST00000557678 LIPIQ6XZB0 460 aa4.8□□□□□ -1.64
GPHN-216ENST00000557678 FERMT3Q86UX7 667 aa4.8□□□□□ -1.64
GPHN-216ENST00000557678 NT5DC4Q86YG4 428 aa4.8□□□□□ -1.64
GPHN-216ENST00000557678 C19orf47Q8N9M1 422 aaKnown RBP4.8□□□□□ -1.64
GPHN-216ENST00000557678 SMARCC2Q8TAQ2 1214 aa4.8□□□□□ -1.64
GPHN-216ENST00000557678 ZNF526Q8TF50 670 aaPredicted RBP4.8□□□□□ -1.64
GPHN-216ENST00000557678 ANAPC16Q96DE5 110 aa4.8□□□□□ -1.64
GPHN-216ENST00000557678 CLEC1BQ9P126 229 aa4.8□□□□□ -1.64
GPHN-216ENST00000557678 ANKRD34BA5PLL1 514 aa4.79□□□□□ -1.64
GPHN-216ENST00000557678 FBLN1P23142 703 aa4.79□□□□□ -1.64
GPHN-216ENST00000557678 TRIM26Q12899 539 aaPredicted RBP4.79□□□□□ -1.64
GPHN-216ENST00000557678 GRB10Q13322 594 aa4.79□□□□□ -1.64
GPHN-216ENST00000557678 RTP5Q14D33 572 aa4.79□□□□□ -1.64
GPHN-216ENST00000557678 WWC2Q6AWC2 1192 aa4.79□□□□□ -1.64
GPHN-216ENST00000557678 DBX2Q6ZNG2 339 aa4.79□□□□□ -1.64
GPHN-216ENST00000557678 TTLL7Q6ZT98 887 aa4.79□□□□□ -1.64
GPHN-216ENST00000557678 ARHGEF39Q8N4T4 335 aa4.79□□□□□ -1.64
GPHN-216ENST00000557678 CRACR2BQ8N4Y2 399 aaPredicted RBP4.79□□□□□ -1.64
GPHN-216ENST00000557678 NETO2Q8NC67 525 aa4.79□□□□□ -1.64
GPHN-216ENST00000557678 KLHL6Q8WZ60 621 aa4.79□□□□□ -1.64
GPHN-216ENST00000557678 DDX1Q92499 740 aaKnown RBP4.79□□□□□ -1.64
GPHN-216ENST00000557678 ZBTB8AQ96BR9 441 aa4.79□□□□□ -1.64
GPHN-216ENST00000557678 APBA2Q99767 749 aa4.79□□□□□ -1.64
GPHN-216ENST00000557678 MARCH2Q9P0N8 246 aa4.79□□□□□ -1.64
GPHN-216ENST00000557678 FBLN5Q9UBX5 448 aa4.79□□□□□ -1.64
GPHN-216ENST00000557678 INPP5FQ9Y2H2 1132 aa4.79□□□□□ -1.64
GPHN-216ENST00000557678 SMARCA5O60264 1052 aaPredicted RBP4.78□□□□□ -1.64
GPHN-216ENST00000557678 ZBTB7AO95365 584 aa4.78□□□□□ -1.64
GPHN-216ENST00000557678 NTRK1P04629 796 aa4.78□□□□□ -1.64
GPHN-216ENST00000557678 NAT2P11245 290 aa4.78□□□□□ -1.64
GPHN-216ENST00000557678 GJA9P57773 515 aa4.78□□□□□ -1.64
GPHN-216ENST00000557678 HDLBPQ00341 1268 aaKnown RBP4.78□□□□□ -1.64
GPHN-216ENST00000557678 SCRN1Q12765 414 aa4.78□□□□□ -1.64
GPHN-216ENST00000557678 SMAD4Q13485 552 aaKnown RBP4.78□□□□□ -1.64
GPHN-216ENST00000557678 SLC9A5Q14940 896 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms