RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 MEIS2O14770 477 aa17.57■□□□□ 0.4
NEDD1-213ENST00000557644 GUCY1B3Q02153 619 aa17.57■□□□□ 0.4
NEDD1-213ENST00000557644 PPP1R18Q6NYC8 613 aa17.57■□□□□ 0.4
NEDD1-213ENST00000557644 MCF2L2Q86YR7 1114 aa17.57■□□□□ 0.4
NEDD1-213ENST00000557644 ABRAQ8N0Z2 381 aa17.57■□□□□ 0.4
NEDD1-213ENST00000557644 INTS4Q96HW7 963 aaKnown RBP17.57■□□□□ 0.4
NEDD1-213ENST00000557644 ZMYND12Q9H0C1 365 aa17.57■□□□□ 0.4
NEDD1-213ENST00000557644 TRIM17Q9Y577 477 aa17.57■□□□□ 0.4
NEDD1-213ENST00000557644 DNAJC25-GNG10A0A024R161 153 aa17.57■□□□□ 0.4
NEDD1-213ENST00000557644 FLT3LGP49771 235 aa17.57■□□□□ 0.4
NEDD1-213ENST00000557644 NLRP5P59047 1200 aa17.57■□□□□ 0.4
NEDD1-213ENST00000557644 OTOP1Q7RTM1 612 aa17.57■□□□□ 0.4
NEDD1-213ENST00000557644 RGS22Q8NE09 1264 aa17.57■□□□□ 0.4
NEDD1-213ENST00000557644 SYTL5Q8TDW5 730 aaPredicted RBP17.57■□□□□ 0.4
NEDD1-213ENST00000557644 USP6NLQ92738 828 aa17.57■□□□□ 0.4
NEDD1-213ENST00000557644 NUDT12Q9BQG2 462 aa17.57■□□□□ 0.4
NEDD1-213ENST00000557644 RIC8AQ9NPQ8 531 aa17.57■□□□□ 0.4
NEDD1-213ENST00000557644 SH3GLB2Q9NR46 395 aa17.57■□□□□ 0.4
NEDD1-213ENST00000557644 PLXNB2O15031 1838 aa17.56■□□□□ 0.4
NEDD1-213ENST00000557644 GCOM1H8Y6P7 765 aaPredicted RBP17.56■□□□□ 0.4
NEDD1-213ENST00000557644 HSP90AA1P07900 732 aaKnown RBP17.56■□□□□ 0.4
NEDD1-213ENST00000557644 POLR2MP0CAP2 368 aa17.56■□□□□ 0.4
NEDD1-213ENST00000557644 CYP2B6P20813 491 aa17.56■□□□□ 0.4
NEDD1-213ENST00000557644 HSD17B4P51659 736 aa17.56■□□□□ 0.4
NEDD1-213ENST00000557644 ADCY7P51828 1080 aa17.56■□□□□ 0.4
NEDD1-213ENST00000557644 MAP2K5Q13163 448 aa17.56■□□□□ 0.4
NEDD1-213ENST00000557644 BECN1Q14457 450 aa17.56■□□□□ 0.4
NEDD1-213ENST00000557644 NPY5RQ15761 445 aa17.56■□□□□ 0.4
NEDD1-213ENST00000557644 DPP9Q86TI2 863 aa17.56■□□□□ 0.4
NEDD1-213ENST00000557644 CCDC12Q8WUD4 166 aaPredicted RBP17.56■□□□□ 0.4
NEDD1-213ENST00000557644 CUL5Q93034 780 aa17.56■□□□□ 0.4
NEDD1-213ENST00000557644 SRRDQ9UH36 339 aa17.56■□□□□ 0.4
NEDD1-213ENST00000557644 DDX49Q9Y6V7 483 aaKnown RBP17.56■□□□□ 0.4
NEDD1-213ENST00000557644 PFASO15067 1338 aa17.56■□□□□ 0.4
NEDD1-213ENST00000557644 FCHSD1Q86WN1 690 aa17.55■□□□□ 0.4
NEDD1-213ENST00000557644 CCDC148Q8NFR7 591 aa17.55■□□□□ 0.4
NEDD1-213ENST00000557644 NPLOC4Q8TAT6 608 aa17.55■□□□□ 0.4
NEDD1-213ENST00000557644 PHF20Q9BVI0 1012 aa17.55■□□□□ 0.4
NEDD1-213ENST00000557644 ASTN1O14525 1302 aa17.55■□□□□ 0.4
NEDD1-213ENST00000557644 POTEB2H3BUK9 544 aa17.55■□□□□ 0.4
NEDD1-213ENST00000557644 ANP32AP39687 249 aaKnown RBP17.55■□□□□ 0.4
NEDD1-213ENST00000557644 GHRHRQ02643 423 aa17.55■□□□□ 0.4
NEDD1-213ENST00000557644 FAM133AQ8N9E0 248 aa17.55■□□□□ 0.4
NEDD1-213ENST00000557644 RASGRP4Q8TDF6 673 aa17.55■□□□□ 0.4
NEDD1-213ENST00000557644 SOCS4Q8WXH5 440 aa17.55■□□□□ 0.4
NEDD1-213ENST00000557644 C8orf76Q96K31 380 aa17.55■□□□□ 0.4
NEDD1-213ENST00000557644 FGD4Q96M96 766 aa17.55■□□□□ 0.4
NEDD1-213ENST00000557644 TMEM260Q9NX78 707 aa17.55■□□□□ 0.4
NEDD1-213ENST00000557644 BRCA2P51587 3418 aa17.55■□□□□ 0.4
NEDD1-213ENST00000557644 ESYT2A0FGR8 921 aa17.54■□□□□ 0.4
NEDD1-213ENST00000557644 XBP1P17861 261 aa17.54■□□□□ 0.4
NEDD1-213ENST00000557644 KRT40Q6A162 431 aa17.54■□□□□ 0.4
NEDD1-213ENST00000557644 TAAR1Q96RJ0 339 aa17.54■□□□□ 0.4
NEDD1-213ENST00000557644 C6orf50Q9HD87 102 aa17.54■□□□□ 0.4
NEDD1-213ENST00000557644 BIN2Q9UBW5 565 aaPredicted RBP17.54■□□□□ 0.4
NEDD1-213ENST00000557644 SOWAHBA6NEL2 793 aa17.54■□□□□ 0.4
NEDD1-213ENST00000557644 PIK3CDO00329 1044 aa17.54■□□□□ 0.4
NEDD1-213ENST00000557644 MRPL12P52815 198 aaKnown RBP17.54■□□□□ 0.4
NEDD1-213ENST00000557644 CCL14Q16627 93 aa17.54■□□□□ 0.4
NEDD1-213ENST00000557644 ZNF792Q3KQV3 632 aa17.54■□□□□ 0.4
NEDD1-213ENST00000557644 PGBD1Q96JS3 809 aa17.54■□□□□ 0.4
NEDD1-213ENST00000557644 HOXD10P28358 340 aa17.53■□□□□ 0.4
NEDD1-213ENST00000557644 RGS2P41220 211 aa17.53■□□□□ 0.4
NEDD1-213ENST00000557644 OXER1Q8TDS5 423 aa17.53■□□□□ 0.4
NEDD1-213ENST00000557644 ZNFX1Q9P2E3 1918 aaKnown RBP17.53■□□□□ 0.4
NEDD1-213ENST00000557644 GNRH1P01148 92 aa17.53■□□□□ 0.4
NEDD1-213ENST00000557644 GNA11P29992 359 aa17.53■□□□□ 0.4
NEDD1-213ENST00000557644 CLK2P49760 499 aaKnown RBP17.53■□□□□ 0.4
NEDD1-213ENST00000557644 TRIM29Q14134 588 aa17.53■□□□□ 0.4
NEDD1-213ENST00000557644 ARHGEF6Q15052 776 aa17.53■□□□□ 0.4
NEDD1-213ENST00000557644 JAKMIP3Q5VZ66 844 aa17.53■□□□□ 0.4
NEDD1-213ENST00000557644 FBXO18Q8NFZ0 1043 aa17.53■□□□□ 0.4
NEDD1-213ENST00000557644 FLRT1Q9NZU1 646 aa17.53■□□□□ 0.4
NEDD1-213ENST00000557644 PCDHA4Q9UN74 947 aa17.53■□□□□ 0.4
NEDD1-213ENST00000557644 MMP1P03956 469 aa17.52■□□□□ 0.4
NEDD1-213ENST00000557644 HOXC6P09630 235 aa17.52■□□□□ 0.4
NEDD1-213ENST00000557644 MAML3Q96JK9 1138 aa17.52■□□□□ 0.4
NEDD1-213ENST00000557644 APBA2Q99767 749 aa17.52■□□□□ 0.4
NEDD1-213ENST00000557644 LCTP09848 1927 aa17.52■□□□□ 0.4
NEDD1-213ENST00000557644 UBXN2AP68543 259 aa17.52■□□□□ 0.39
NEDD1-213ENST00000557644 LARP1BQ659C4 914 aaKnown RBP17.52■□□□□ 0.39
NEDD1-213ENST00000557644 BLIDQ8IZY5 108 aa17.52■□□□□ 0.39
NEDD1-213ENST00000557644 REXO1Q8N1G1 1221 aaKnown RBP17.52■□□□□ 0.39
NEDD1-213ENST00000557644 RMDN3Q96TC7 470 aa17.52■□□□□ 0.39
NEDD1-213ENST00000557644 MAP3K20Q9NYL2 800 aaKnown RBP17.52■□□□□ 0.39
NEDD1-213ENST00000557644 KIF3AQ9Y496 699 aa17.52■□□□□ 0.39
NEDD1-213ENST00000557644 RBBP6Q7Z6E9 1792 aaKnown RBP17.51■□□□□ 0.39
NEDD1-213ENST00000557644 M0R2N6 131 aa17.51■□□□□ 0.39
NEDD1-213ENST00000557644 EIF2AK2P19525 551 aaKnown RBP17.51■□□□□ 0.39
NEDD1-213ENST00000557644 NR5A1Q13285 461 aa17.51■□□□□ 0.39
NEDD1-213ENST00000557644 RAET1EQ8TD07 263 aa17.51■□□□□ 0.39
NEDD1-213ENST00000557644 PCDHA6Q9UN73 950 aa17.51■□□□□ 0.39
NEDD1-213ENST00000557644 PCDHA8Q9Y5H6 950 aa17.51■□□□□ 0.39
NEDD1-213ENST00000557644 PTCH2Q9Y6C5 1203 aa17.51■□□□□ 0.39
NEDD1-213ENST00000557644 ZNF236Q9UL36 1845 aa17.51■□□□□ 0.39
NEDD1-213ENST00000557644 ELNP15502 786 aa17.51■□□□□ 0.39
NEDD1-213ENST00000557644 SAMD3Q8N6K7 520 aa17.51■□□□□ 0.39
NEDD1-213ENST00000557644 DAGLBQ8NCG7 672 aa17.51■□□□□ 0.39
NEDD1-213ENST00000557644 GLT8D2Q9H1C3 349 aa17.51■□□□□ 0.39
NEDD1-213ENST00000557644 BTBD18B2RXH4 712 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms