RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 TJAP1Q5JTD0 557 aa16.66■□□□□ 0.26
SLIRP-210ENST00000557431 SLC30A10Q6XR72 485 aa16.66■□□□□ 0.26
SLIRP-210ENST00000557431 DOCK5Q9H7D0 1870 aa16.66■□□□□ 0.26
SLIRP-210ENST00000557431 TRMT13Q9NUP7 481 aaKnown RBP16.66■□□□□ 0.26
SLIRP-210ENST00000557431 A0A0D9SFI3 127 aa16.65■□□□□ 0.26
SLIRP-210ENST00000557431 PTPDC1A2A3K4 754 aa16.65■□□□□ 0.26
SLIRP-210ENST00000557431 ZBBXA8MT70 800 aa16.65■□□□□ 0.26
SLIRP-210ENST00000557431 PLA2G6O60733 806 aa16.65■□□□□ 0.26
SLIRP-210ENST00000557431 ICAM1P05362 532 aa16.65■□□□□ 0.26
SLIRP-210ENST00000557431 MYL3P08590 195 aa16.65■□□□□ 0.26
SLIRP-210ENST00000557431 HAND2P61296 217 aa16.65■□□□□ 0.26
SLIRP-210ENST00000557431 SYDE2Q5VT97 1194 aa16.65■□□□□ 0.26
SLIRP-210ENST00000557431 IQSEC1Q6DN90 963 aa16.65■□□□□ 0.26
SLIRP-210ENST00000557431 MICALL1Q8N3F8 863 aa16.65■□□□□ 0.26
SLIRP-210ENST00000557431 COPS5Q92905 334 aa16.65■□□□□ 0.26
SLIRP-210ENST00000557431 FAM227BQ96M60 508 aa16.65■□□□□ 0.26
SLIRP-210ENST00000557431 RANBP17Q9H2T7 1088 aaKnown RBP16.65■□□□□ 0.26
SLIRP-210ENST00000557431 RAPGEFL1Q9UHV5 662 aa16.65■□□□□ 0.26
SLIRP-210ENST00000557431 MSRAQ9UJ68 235 aa16.65■□□□□ 0.26
SLIRP-210ENST00000557431 CALML3P27482 149 aa16.64■□□□□ 0.25
SLIRP-210ENST00000557431 DEFB128Q7Z7B8 93 aa16.64■□□□□ 0.25
SLIRP-210ENST00000557431 SYMPKQ92797 1274 aaKnown RBP16.64■□□□□ 0.25
SLIRP-210ENST00000557431 TMEM47Q9BQJ4 181 aa16.64■□□□□ 0.25
SLIRP-210ENST00000557431 CPVLQ9H3G5 476 aa16.64■□□□□ 0.25
SLIRP-210ENST00000557431 VTA1Q9NP79 307 aa16.64■□□□□ 0.25
SLIRP-210ENST00000557431 BAZ2BQ9UIF8 2168 aaKnown RBP16.63■□□□□ 0.25
SLIRP-210ENST00000557431 RFXAPO00287 272 aa16.63■□□□□ 0.25
SLIRP-210ENST00000557431 ZEB2O60315 1214 aa16.63■□□□□ 0.25
SLIRP-210ENST00000557431 CABYRO75952 493 aa16.63■□□□□ 0.25
SLIRP-210ENST00000557431 TTLL4Q14679 1199 aa16.63■□□□□ 0.25
SLIRP-210ENST00000557431 RAB30Q15771 203 aa16.63■□□□□ 0.25
SLIRP-210ENST00000557431 FAM47CQ5HY64 1035 aa16.63■□□□□ 0.25
SLIRP-210ENST00000557431 ANKRD45Q5TZF3 282 aa16.63■□□□□ 0.25
SLIRP-210ENST00000557431 ZNF589Q86UQ0 364 aaPredicted RBP16.63■□□□□ 0.25
SLIRP-210ENST00000557431 OR6J1Q8NGC5 347 aa16.63■□□□□ 0.25
SLIRP-210ENST00000557431 DCAF4Q8WV16 495 aa16.63■□□□□ 0.25
SLIRP-210ENST00000557431 WDR11Q9BZH6 1224 aa16.63■□□□□ 0.25
SLIRP-210ENST00000557431 ALDH8A1Q9H2A2 487 aaPredicted RBP16.63■□□□□ 0.25
SLIRP-210ENST00000557431 ANAPC4Q9UJX5 808 aa16.63■□□□□ 0.25
SLIRP-210ENST00000557431 NCOR1O75376 2440 aa16.62■□□□□ 0.25
SLIRP-210ENST00000557431 REV3LO60673 3130 aa16.62■□□□□ 0.25
SLIRP-210ENST00000557431 ORC4O43929 436 aa16.62■□□□□ 0.25
SLIRP-210ENST00000557431 DUSP28Q4G0W2 176 aa16.62■□□□□ 0.25
SLIRP-210ENST00000557431 MORC4Q8TE76 937 aa16.62■□□□□ 0.25
SLIRP-210ENST00000557431 CLEC4DQ8WXI8 215 aa16.62■□□□□ 0.25
SLIRP-210ENST00000557431 CERS4Q9HA82 394 aa16.62■□□□□ 0.25
SLIRP-210ENST00000557431 SLC28A3Q9HAS3 691 aa16.62■□□□□ 0.25
SLIRP-210ENST00000557431 THEGQ9P2T0 379 aa16.62■□□□□ 0.25
SLIRP-210ENST00000557431 TNKSO95271 1327 aa16.62■□□□□ 0.25
SLIRP-210ENST00000557431 CHD9Q3L8U1 2897 aa16.62■□□□□ 0.25
SLIRP-210ENST00000557431 CHD7Q9P2D1 2997 aa16.61■□□□□ 0.25
SLIRP-210ENST00000557431 TNFRSF10AO00220 468 aa16.61■□□□□ 0.25
SLIRP-210ENST00000557431 FGAP02671 866 aa16.61■□□□□ 0.25
SLIRP-210ENST00000557431 TOP1P11387 765 aaKnown RBP16.61■□□□□ 0.25
SLIRP-210ENST00000557431 NOVP48745 357 aa16.61■□□□□ 0.25
SLIRP-210ENST00000557431 CHMP4BP1P59074 171 aa16.61■□□□□ 0.25
SLIRP-210ENST00000557431 PURAQ00577 322 aaKnown RBP16.61■□□□□ 0.25
SLIRP-210ENST00000557431 NMIQ13287 307 aaPredicted RBP16.61■□□□□ 0.25
SLIRP-210ENST00000557431 PPP2R2DQ66LE6 453 aa16.61■□□□□ 0.25
SLIRP-210ENST00000557431 BTNL9Q6UXG8 535 aa16.61■□□□□ 0.25
SLIRP-210ENST00000557431 NECAB3Q96P71 396 aaPredicted RBP16.61■□□□□ 0.25
SLIRP-210ENST00000557431 CRBNQ96SW2 442 aa16.61■□□□□ 0.25
SLIRP-210ENST00000557431 ZKSCAN3Q9BRR0 538 aa16.61■□□□□ 0.25
SLIRP-210ENST00000557431 SLC4A7Q9Y6M7 1214 aa16.61■□□□□ 0.25
SLIRP-210ENST00000557431 ARHGEF15O94989 841 aa16.6■□□□□ 0.25
SLIRP-210ENST00000557431 FGRP09769 529 aa16.6■□□□□ 0.25
SLIRP-210ENST00000557431 GOLGA8HP0CJ92 632 aa16.6■□□□□ 0.25
SLIRP-210ENST00000557431 PDHBP11177 359 aa16.6■□□□□ 0.25
SLIRP-210ENST00000557431 USH1GQ495M9 461 aa16.6■□□□□ 0.25
SLIRP-210ENST00000557431 PPP4R3BQ5MIZ7 849 aa16.6■□□□□ 0.25
SLIRP-210ENST00000557431 AKNAD1Q5T1N1 836 aa16.6■□□□□ 0.25
SLIRP-210ENST00000557431 KRT40Q6A162 431 aa16.6■□□□□ 0.25
SLIRP-210ENST00000557431 TBC1D10CQ8IV04 446 aa16.6■□□□□ 0.25
SLIRP-210ENST00000557431 MTIF3Q9H2K0 278 aaKnown RBP16.6■□□□□ 0.25
SLIRP-210ENST00000557431 ADD3Q9UEY8 706 aaKnown RBP16.6■□□□□ 0.25
SLIRP-210ENST00000557431 Q9Y3F1 56 aa16.6■□□□□ 0.25
SLIRP-210ENST00000557431 MUC3AQ02505 3323 aa16.6■□□□□ 0.25
SLIRP-210ENST00000557431 ARIH2O95376 493 aa16.59■□□□□ 0.25
SLIRP-210ENST00000557431 HSPD1P10809 573 aaKnown RBP16.59■□□□□ 0.25
SLIRP-210ENST00000557431 PDE1AP54750 535 aa16.59■□□□□ 0.25
SLIRP-210ENST00000557431 RPS6P62753 249 aaKnown RBP16.59■□□□□ 0.25
SLIRP-210ENST00000557431 NBPF20Q3BBV1 942 aa16.59■□□□□ 0.25
SLIRP-210ENST00000557431 RNF207Q6ZRF8 634 aa16.59■□□□□ 0.25
SLIRP-210ENST00000557431 SPRED2Q7Z698 418 aa16.59■□□□□ 0.25
SLIRP-210ENST00000557431 ADAMTS19Q8TE59 1207 aa16.59■□□□□ 0.25
SLIRP-210ENST00000557431 EVI5LQ96CN4 794 aa16.59■□□□□ 0.25
SLIRP-210ENST00000557431 ASB2Q96Q27 587 aa16.59■□□□□ 0.25
SLIRP-210ENST00000557431 HELLSQ9NRZ9 838 aa16.59■□□□□ 0.25
SLIRP-210ENST00000557431 POLR3EQ9NVU0 708 aa16.59■□□□□ 0.25
SLIRP-210ENST00000557431 NEDD4P46934 1319 aa16.59■□□□□ 0.25
SLIRP-210ENST00000557431 BRWD1Q9NSI6 2320 aa16.59■□□□□ 0.25
SLIRP-210ENST00000557431 SIP14410 1827 aa16.59■□□□□ 0.25
SLIRP-210ENST00000557431 MICAL3Q7RTP6 2002 aa16.58■□□□□ 0.25
SLIRP-210ENST00000557431 RBM47A0AV96 593 aaKnown RBP16.58■□□□□ 0.24
SLIRP-210ENST00000557431 EPOPA6NHQ4 379 aa16.58■□□□□ 0.24
SLIRP-210ENST00000557431 ATP2A2P16615 1042 aaKnown RBP16.58■□□□□ 0.24
SLIRP-210ENST00000557431 TFF2Q03403 129 aa16.58■□□□□ 0.24
SLIRP-210ENST00000557431 PDE4DQ08499 809 aa16.58■□□□□ 0.24
SLIRP-210ENST00000557431 ALX1Q15699 326 aa16.58■□□□□ 0.24
SLIRP-210ENST00000557431 RPUSD2Q8IZ73 545 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms