RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 GRB10Q13322 594 aa7.11□□□□□ -1.27
VRK1-207ENST00000557352 VMACQ2NL98 169 aa7.11□□□□□ -1.27
VRK1-207ENST00000557352 ZNF513Q8N8E2 541 aaPredicted RBP7.11□□□□□ -1.27
VRK1-207ENST00000557352 STRIP2Q9ULQ0 834 aa7.11□□□□□ -1.27
VRK1-207ENST00000557352 SUGT1Q9Y2Z0 365 aa7.11□□□□□ -1.27
VRK1-207ENST00000557352 BACE2Q9Y5Z0 518 aa7.11□□□□□ -1.27
VRK1-207ENST00000557352 ZC3H12DA2A288 527 aaKnown RBP7.1□□□□□ -1.27
VRK1-207ENST00000557352 ANKRD34BA5PLL1 514 aa7.1□□□□□ -1.27
VRK1-207ENST00000557352 F8W031 263 aaPredicted RBP7.1□□□□□ -1.27
VRK1-207ENST00000557352 FBLN1P23142 703 aa7.1□□□□□ -1.27
VRK1-207ENST00000557352 SEPHS1P49903 392 aa7.1□□□□□ -1.27
VRK1-207ENST00000557352 PRR5P85299 388 aa7.1□□□□□ -1.27
VRK1-207ENST00000557352 RELTQ969Z4 430 aa7.1□□□□□ -1.27
VRK1-207ENST00000557352 ANAPC16Q96DE5 110 aa7.1□□□□□ -1.27
VRK1-207ENST00000557352 PWWP2AQ96N64 755 aa7.1□□□□□ -1.27
VRK1-207ENST00000557352 CCSER2Q9H7U1 834 aa7.1□□□□□ -1.27
VRK1-207ENST00000557352 APEX2Q9UBZ4 518 aa7.1□□□□□ -1.27
VRK1-207ENST00000557352 PLA2G2DQ9UNK4 145 aa7.1□□□□□ -1.27
VRK1-207ENST00000557352 GLI4P10075 376 aa7.09□□□□□ -1.27
VRK1-207ENST00000557352 PFKLP17858 780 aa7.09□□□□□ -1.27
VRK1-207ENST00000557352 CPNE8Q86YQ8 564 aa7.09□□□□□ -1.27
VRK1-207ENST00000557352 FBLN5Q9UBX5 448 aa7.09□□□□□ -1.27
VRK1-207ENST00000557352 AKT3Q9Y243 479 aa7.09□□□□□ -1.27
VRK1-207ENST00000557352 PPP1R11O60927 126 aaPredicted RBP7.08□□□□□ -1.28
VRK1-207ENST00000557352 ATF4P18848 351 aaPredicted RBP7.08□□□□□ -1.28
VRK1-207ENST00000557352 LIMS1P48059 325 aa7.08□□□□□ -1.28
VRK1-207ENST00000557352 TARBP2Q15633 366 aaKnown RBP7.08□□□□□ -1.28
VRK1-207ENST00000557352 XYLT2Q9H1B5 865 aa7.08□□□□□ -1.28
VRK1-207ENST00000557352 DBR1Q9UK59 544 aaKnown RBP7.08□□□□□ -1.28
VRK1-207ENST00000557352 RWDD3Q9Y3V2 267 aa7.08□□□□□ -1.28
VRK1-207ENST00000557352 FOXD2O60548 495 aaPredicted RBP7.07□□□□□ -1.28
VRK1-207ENST00000557352 PAMP19021 973 aa7.07□□□□□ -1.28
VRK1-207ENST00000557352 LZTR1Q8N653 840 aa7.07□□□□□ -1.28
VRK1-207ENST00000557352 LINC01356Q8N9X3 169 aa7.07□□□□□ -1.28
VRK1-207ENST00000557352 APBA2Q99767 749 aa7.07□□□□□ -1.28
VRK1-207ENST00000557352 RXFP1Q9HBX9 757 aa7.07□□□□□ -1.28
VRK1-207ENST00000557352 EMC9Q9Y3B6 208 aa7.07□□□□□ -1.28
VRK1-207ENST00000557352 NPHP3-ACAD11A0A0J9YXS1 232 aa7.06□□□□□ -1.28
VRK1-207ENST00000557352 SASH1O94885 1247 aa7.06□□□□□ -1.28
VRK1-207ENST00000557352 KCNH1O95259 989 aa7.06□□□□□ -1.28
VRK1-207ENST00000557352 ATF2P15336 505 aa7.06□□□□□ -1.28
VRK1-207ENST00000557352 CABP7Q86V35 215 aa7.06□□□□□ -1.28
VRK1-207ENST00000557352 TP53I13Q8NBR0 393 aaPredicted RBP7.06□□□□□ -1.28
VRK1-207ENST00000557352 BVESQ8NE79 360 aa7.06□□□□□ -1.28
VRK1-207ENST00000557352 MTA3Q9BTC8 594 aa7.06□□□□□ -1.28
VRK1-207ENST00000557352 GULP1Q9UBP9 304 aa7.06□□□□□ -1.28
VRK1-207ENST00000557352 TRBV23OR9-2A0A075B6M9 112 aa7.05□□□□□ -1.28
VRK1-207ENST00000557352 OTOL1A6NHN0 477 aaPredicted RBP7.05□□□□□ -1.28
VRK1-207ENST00000557352 ZNF143P52747 638 aaPredicted RBP7.05□□□□□ -1.28
VRK1-207ENST00000557352 FOXO4P98177 505 aa7.05□□□□□ -1.28
VRK1-207ENST00000557352 CAP1Q01518 475 aa7.05□□□□□ -1.28
VRK1-207ENST00000557352 NCAPHQ15003 741 aa7.05□□□□□ -1.28
VRK1-207ENST00000557352 NLGN1Q8N2Q7 840 aa7.05□□□□□ -1.28
VRK1-207ENST00000557352 FEZF2Q8TBJ5 459 aa7.05□□□□□ -1.28
VRK1-207ENST00000557352 COPS5Q92905 334 aa7.05□□□□□ -1.28
VRK1-207ENST00000557352 KRTAP4-5Q9BYR2 181 aa7.05□□□□□ -1.28
VRK1-207ENST00000557352 RNF38Q9H0F5 515 aa7.05□□□□□ -1.28
VRK1-207ENST00000557352 GPRC5CQ9NQ84 441 aa7.05□□□□□ -1.28
VRK1-207ENST00000557352 RTEL1Q9NZ71 1219 aa7.05□□□□□ -1.28
VRK1-207ENST00000557352 C7orf72A4D263 438 aa7.04□□□□□ -1.28
VRK1-207ENST00000557352 FFAR3O14843 346 aa7.04□□□□□ -1.28
VRK1-207ENST00000557352 ASGR2P07307 311 aa7.04□□□□□ -1.28
VRK1-207ENST00000557352 NAT2P11245 290 aa7.04□□□□□ -1.28
VRK1-207ENST00000557352 NCAM1P13591 858 aa7.04□□□□□ -1.28
VRK1-207ENST00000557352 SCRN1Q12765 414 aa7.04□□□□□ -1.28
VRK1-207ENST00000557352 NFIXQ14938 502 aa7.04□□□□□ -1.28
VRK1-207ENST00000557352 POMZP3Q6PJE2 187 aa7.04□□□□□ -1.28
VRK1-207ENST00000557352 CRACR2BQ8N4Y2 399 aaPredicted RBP7.04□□□□□ -1.28
VRK1-207ENST00000557352 NETO2Q8NC67 525 aa7.04□□□□□ -1.28
VRK1-207ENST00000557352 ALG3Q92685 438 aa7.04□□□□□ -1.28
VRK1-207ENST00000557352 TSPAN17Q96FV3 270 aa7.04□□□□□ -1.28
VRK1-207ENST00000557352 BCAS3Q9H6U6 928 aa7.04□□□□□ -1.28
VRK1-207ENST00000557352 CAPN10Q9HC96 672 aa7.04□□□□□ -1.28
VRK1-207ENST00000557352 CLEC1BQ9P126 229 aa7.04□□□□□ -1.28
VRK1-207ENST00000557352 MRVI1Q9Y6F6 885 aa7.04□□□□□ -1.28
VRK1-207ENST00000557352 NOP56O00567 594 aaKnown RBP7.03□□□□□ -1.28
VRK1-207ENST00000557352 SMAD7O15105 426 aaKnown RBP7.03□□□□□ -1.28
VRK1-207ENST00000557352 NPHS1O60500 1241 aa7.03□□□□□ -1.28
VRK1-207ENST00000557352 PLA2G1BP04054 148 aaKnown RBP7.03□□□□□ -1.28
VRK1-207ENST00000557352 PLS3P13797 630 aa7.03□□□□□ -1.28
VRK1-207ENST00000557352 MC3RP41968 323 aa7.03□□□□□ -1.28
VRK1-207ENST00000557352 MBLAC2Q68D91 279 aa7.03□□□□□ -1.28
VRK1-207ENST00000557352 GTF2IRD2BQ6EKJ0 949 aa7.03□□□□□ -1.28
VRK1-207ENST00000557352 GTF2IRD2Q86UP8 949 aa7.03□□□□□ -1.28
VRK1-207ENST00000557352 TRIM59Q8IWR1 403 aa7.03□□□□□ -1.28
VRK1-207ENST00000557352 SP8Q8IXZ3 490 aa7.03□□□□□ -1.28
VRK1-207ENST00000557352 SYT8Q8NBV8 401 aa7.03□□□□□ -1.28
VRK1-207ENST00000557352 FNIP1Q8TF40 1166 aa7.03□□□□□ -1.28
VRK1-207ENST00000557352 PEX11GQ96HA9 241 aa7.03□□□□□ -1.28
VRK1-207ENST00000557352 MRGPRX3Q96LB0 322 aa7.03□□□□□ -1.28
VRK1-207ENST00000557352 LGR4Q9BXB1 951 aa7.03□□□□□ -1.28
VRK1-207ENST00000557352 LUC7LQ9NQ29 371 aaKnown RBP7.03□□□□□ -1.28
VRK1-207ENST00000557352 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.03□□□□□ -1.28
VRK1-207ENST00000557352 ERCC5P28715 1186 aaPredicted RBP7.02□□□□□ -1.29
VRK1-207ENST00000557352 PMLP29590 882 aa7.02□□□□□ -1.29
VRK1-207ENST00000557352 VWA3BQ502W6 1294 aa7.02□□□□□ -1.29
VRK1-207ENST00000557352 VPS37DQ86XT2 251 aa7.02□□□□□ -1.29
VRK1-207ENST00000557352 ZDHHC14Q8IZN3 488 aa7.02□□□□□ -1.29
VRK1-207ENST00000557352 USP33Q8TEY7 942 aa7.02□□□□□ -1.29
VRK1-207ENST00000557352 PPP1R14AQ96A00 147 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms