RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 TTC22Q5TAA0 569 aa16.6■□□□□ 0.25
SNX6-210ENST00000557341 TAPT1Q6NXT6 567 aa16.6■□□□□ 0.25
SNX6-210ENST00000557341 FAM126BQ8IXS8 530 aa16.6■□□□□ 0.25
SNX6-210ENST00000557341 CLEC4DQ8WXI8 215 aa16.6■□□□□ 0.25
SNX6-210ENST00000557341 RNPC3Q96LT9 517 aaKnown RBP16.6■□□□□ 0.25
SNX6-210ENST00000557341 ZSCAN10Q96SZ4 725 aaPredicted RBP16.6■□□□□ 0.25
SNX6-210ENST00000557341 MPHOSPH6Q99547 160 aaKnown RBP16.6■□□□□ 0.25
SNX6-210ENST00000557341 KRT23Q9C075 422 aa16.6■□□□□ 0.25
SNX6-210ENST00000557341 CNNM2Q9H8M5 875 aa16.6■□□□□ 0.25
SNX6-210ENST00000557341 PDGFCQ9NRA1 345 aa16.6■□□□□ 0.25
SNX6-210ENST00000557341 Q9Y3F1 56 aa16.6■□□□□ 0.25
SNX6-210ENST00000557341 TNKSO95271 1327 aa16.6■□□□□ 0.25
SNX6-210ENST00000557341 TIMP1P01033 207 aa16.59■□□□□ 0.25
SNX6-210ENST00000557341 GSPT1P15170 499 aaKnown RBP16.59■□□□□ 0.25
SNX6-210ENST00000557341 PDE4AP27815 886 aa16.59■□□□□ 0.25
SNX6-210ENST00000557341 USH1GQ495M9 461 aa16.59■□□□□ 0.25
SNX6-210ENST00000557341 ASPRV1Q53RT3 343 aa16.59■□□□□ 0.25
SNX6-210ENST00000557341 CXCL17Q6UXB2 119 aa16.59■□□□□ 0.25
SNX6-210ENST00000557341 KIAA1211Q6ZU35 1233 aa16.59■□□□□ 0.25
SNX6-210ENST00000557341 ENAHQ8N8S7 591 aaPredicted RBP16.59■□□□□ 0.25
SNX6-210ENST00000557341 UBAC1Q9BSL1 405 aa16.59■□□□□ 0.25
SNX6-210ENST00000557341 DYNC1LI2O43237 492 aaPredicted RBP16.58■□□□□ 0.24
SNX6-210ENST00000557341 EPHB4P54760 987 aa16.58■□□□□ 0.24
SNX6-210ENST00000557341 RPS6P62753 249 aaKnown RBP16.58■□□□□ 0.24
SNX6-210ENST00000557341 SMAD3P84022 425 aaKnown RBP16.58■□□□□ 0.24
SNX6-210ENST00000557341 CDC37Q16543 378 aaPredicted RBP16.58■□□□□ 0.24
SNX6-210ENST00000557341 DUSP28Q4G0W2 176 aa16.58■□□□□ 0.24
SNX6-210ENST00000557341 SLC17A8Q8NDX2 589 aa16.58■□□□□ 0.24
SNX6-210ENST00000557341 DNERQ8NFT8 737 aa16.58■□□□□ 0.24
SNX6-210ENST00000557341 ANKS1AQ92625 1134 aa16.58■□□□□ 0.24
SNX6-210ENST00000557341 IL25Q9H293 177 aa16.58■□□□□ 0.24
SNX6-210ENST00000557341 ZSWIM5Q9P217 1185 aa16.58■□□□□ 0.24
SNX6-210ENST00000557341 SCN5AQ14524 2016 aa16.58■□□□□ 0.24
SNX6-210ENST00000557341 A0A0C4DFX4 3053 aa16.58■□□□□ 0.24
SNX6-210ENST00000557341 ABCB11O95342 1321 aa16.57■□□□□ 0.24
SNX6-210ENST00000557341 PTGS1P23219 599 aa16.57■□□□□ 0.24
SNX6-210ENST00000557341 PDE4DQ08499 809 aa16.57■□□□□ 0.24
SNX6-210ENST00000557341 PPIGQ13427 754 aaKnown RBP eCLIP16.57■□□□□ 0.24
SNX6-210ENST00000557341 MFSD5Q6N075 450 aa16.57■□□□□ 0.24
SNX6-210ENST00000557341 FAM161BQ96MY7 647 aa16.57■□□□□ 0.24
SNX6-210ENST00000557341 SEZ6LQ9BYH1 1024 aa16.57■□□□□ 0.24
SNX6-210ENST00000557341 WDR11Q9BZH6 1224 aa16.57■□□□□ 0.24
SNX6-210ENST00000557341 UBA5Q9GZZ9 404 aa16.57■□□□□ 0.24
SNX6-210ENST00000557341 CPVLQ9H3G5 476 aa16.57■□□□□ 0.24
SNX6-210ENST00000557341 BAZ2BQ9UIF8 2168 aaKnown RBP16.56■□□□□ 0.24
SNX6-210ENST00000557341 B4DLN1 442 aa16.56■□□□□ 0.24
SNX6-210ENST00000557341 CD4P01730 458 aa16.56■□□□□ 0.24
SNX6-210ENST00000557341 PARP1P09874 1014 aaKnown RBP16.56■□□□□ 0.24
SNX6-210ENST00000557341 EDNRBP24530 442 aa16.56■□□□□ 0.24
SNX6-210ENST00000557341 MRPL12P52815 198 aaKnown RBP16.56■□□□□ 0.24
SNX6-210ENST00000557341 ITGA7Q13683 1181 aa16.56■□□□□ 0.24
SNX6-210ENST00000557341 TMEM63BQ5T3F8 832 aa16.56■□□□□ 0.24
SNX6-210ENST00000557341 IFIT1BQ5T764 474 aaKnown RBP16.56■□□□□ 0.24
SNX6-210ENST00000557341 SLC43A3Q8NBI5 491 aa16.56■□□□□ 0.24
SNX6-210ENST00000557341 RUFY2Q8WXA3 655 aa16.56■□□□□ 0.24
SNX6-210ENST00000557341 GUCD1Q96NT3 240 aa16.56■□□□□ 0.24
SNX6-210ENST00000557341 PPP1R12CQ9BZL4 782 aa16.56■□□□□ 0.24
SNX6-210ENST00000557341 RBM47A0AV96 593 aaKnown RBP16.55■□□□□ 0.24
SNX6-210ENST00000557341 DHX16O60231 1041 aaKnown RBP16.55■□□□□ 0.24
SNX6-210ENST00000557341 CPT1AP50416 773 aa16.55■□□□□ 0.24
SNX6-210ENST00000557341 PPP2R5BQ15173 497 aa16.55■□□□□ 0.24
SNX6-210ENST00000557341 ADGRF4Q8IZF3 695 aa16.55■□□□□ 0.24
SNX6-210ENST00000557341 TMEM199Q8N511 208 aa16.55■□□□□ 0.24
SNX6-210ENST00000557341 RGS22Q8NE09 1264 aa16.55■□□□□ 0.24
SNX6-210ENST00000557341 MAF1Q9H063 256 aa16.55■□□□□ 0.24
SNX6-210ENST00000557341 TRIP12Q14669 1992 aaPredicted RBP16.55■□□□□ 0.24
SNX6-210ENST00000557341 PRUNE2Q8WUY3 3088 aa16.54■□□□□ 0.24
SNX6-210ENST00000557341 NKRFO15226 690 aaKnown RBP eCLIP16.54■□□□□ 0.24
SNX6-210ENST00000557341 IRX6P78412 446 aaPredicted RBP16.54■□□□□ 0.24
SNX6-210ENST00000557341 TRDNQ13061 729 aa16.54■□□□□ 0.24
SNX6-210ENST00000557341 OR6J1Q8NGC5 347 aa16.54■□□□□ 0.24
SNX6-210ENST00000557341 SCFD2Q8WU76 684 aa16.54■□□□□ 0.24
SNX6-210ENST00000557341 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.54■□□□□ 0.241e-14■□□□□ 11
SNX6-210ENST00000557341 POLR3EQ9NVU0 708 aa16.54■□□□□ 0.24
SNX6-210ENST00000557341 GRIN2DO15399 1336 aa16.53■□□□□ 0.24
SNX6-210ENST00000557341 TMEM265A0A087WTH1 108 aa16.53■□□□□ 0.24
SNX6-210ENST00000557341 CSF2RAP15509 400 aa16.53■□□□□ 0.24
SNX6-210ENST00000557341 PSMC6P62333 389 aa16.53■□□□□ 0.24
SNX6-210ENST00000557341 SEC23AQ15436 765 aa16.53■□□□□ 0.24
SNX6-210ENST00000557341 QRICH1Q2TAL8 776 aa16.53■□□□□ 0.24
SNX6-210ENST00000557341 BRDTQ58F21 947 aaPredicted RBP16.53■□□□□ 0.24
SNX6-210ENST00000557341 PSRC1Q6PGN9 363 aaPredicted RBP16.53■□□□□ 0.24
SNX6-210ENST00000557341 FBXO11Q86XK2 927 aa16.53■□□□□ 0.24
SNX6-210ENST00000557341 MCF2L2Q86YR7 1114 aa16.53■□□□□ 0.24
SNX6-210ENST00000557341 HIPK3Q9H422 1215 aa16.53■□□□□ 0.24
SNX6-210ENST00000557341 U3KPZ7 1027 aaPredicted RBP16.53■□□□□ 0.24
SNX6-210ENST00000557341 DOCK5Q9H7D0 1870 aa16.52■□□□□ 0.24
SNX6-210ENST00000557341 B4GALT4O60513 344 aa16.52■□□□□ 0.24
SNX6-210ENST00000557341 CYP21A2P08686 494 aa16.52■□□□□ 0.24
SNX6-210ENST00000557341 CHMLP26374 656 aa16.52■□□□□ 0.24
SNX6-210ENST00000557341 PURAQ00577 322 aaKnown RBP16.52■□□□□ 0.24
SNX6-210ENST00000557341 CYB5R4Q7L1T6 521 aa16.52■□□□□ 0.24
SNX6-210ENST00000557341 JMJD4Q9H9V9 463 aa16.52■□□□□ 0.24
SNX6-210ENST00000557341 GPHNQ9NQX3 736 aaPredicted RBP16.52■□□□□ 0.24
SNX6-210ENST00000557341 MRPL11Q9Y3B7 192 aaKnown RBP16.52■□□□□ 0.24
SNX6-210ENST00000557341 CHD9Q3L8U1 2897 aa16.52■□□□□ 0.24
SNX6-210ENST00000557341 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.51■□□□□ 0.23
SNX6-210ENST00000557341 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.51■□□□□ 0.23
SNX6-210ENST00000557341 MYL3P08590 195 aa16.51■□□□□ 0.23
SNX6-210ENST00000557341 DNAJB2P25686 324 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms