RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 KLHL31Q9H511 634 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 STK17AQ9UEE5 414 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 FAM83GA6ND36 823 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 XPAP23025 273 aaPredicted RBP9.56□□□□□ -0.88
SYNE3-205ENST00000557275 RUNX1T1Q06455 604 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 PUM3Q15397 648 aaKnown RBP9.56□□□□□ -0.88
SYNE3-205ENST00000557275 SLFNL1Q499Z3 407 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 TCP11Q8WWU5 503 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 MSH2P43246 934 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 CTNND1O60716 968 aaKnown RBP9.56□□□□□ -0.88
SYNE3-205ENST00000557275 ESRRAP11474 423 aaPredicted RBP9.56□□□□□ -0.88
SYNE3-205ENST00000557275 OCRLQ01968 901 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 NLRP4Q96MN2 994 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 HELLSQ9NRZ9 838 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 MYO1EQ12965 1108 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 SCG3Q8WXD2 468 aaKnown RBP9.56□□□□□ -0.88
SYNE3-205ENST00000557275 CASP14P31944 242 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 GALNT17Q6IS24 598 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 CCDC8Q9H0W5 538 aaPredicted RBP9.56□□□□□ -0.88
SYNE3-205ENST00000557275 CPP00450 1065 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 BFSP1Q12934 665 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 NDUFA5Q16718 116 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 NEK8Q86SG6 692 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 WDR75Q8IWA0 830 aaKnown RBP9.56□□□□□ -0.88
SYNE3-205ENST00000557275 ZMYM3Q14202 1370 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 ASXL1Q8IXJ9 1541 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 RSPH10B2B2RC85 870 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 RSPH10BP0C881 870 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 WASHC5Q12768 1159 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 CALCRLQ16602 461 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 SLC12A6Q9UHW9 1150 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 IVNS1ABPQ9Y6Y0 642 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 KRT37O76014 449 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 SLFN14P0C7P3 912 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 ANO1Q5XXA6 986 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 NBPF5PQ86XG9 351 aaPredicted RBP9.56□□□□□ -0.88
SYNE3-205ENST00000557275 OLFM1Q99784 485 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 SYTL2Q9HCH5 934 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 PHLPP2Q6ZVD8 1323 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 URB1O60287 2271 aaKnown RBP9.56□□□□□ -0.88
SYNE3-205ENST00000557275 HAND2P61296 217 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 C2CD5Q86YS7 1000 aa9.56□□□□□ -0.88
SYNE3-205ENST00000557275 FMNL1O95466 1100 aaPredicted RBP9.56□□□□□ -0.88
SYNE3-205ENST00000557275 BIN2Q9UBW5 565 aaPredicted RBP9.56□□□□□ -0.88
SYNE3-205ENST00000557275 CAV1Q03135 178 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 EYA3Q99504 573 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 PICK1Q9NRD5 415 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 ANGEL1Q9UNK9 670 aaKnown RBP9.55□□□□□ -0.88
SYNE3-205ENST00000557275 WDR97A6NE52 1622 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 FOXP2O15409 715 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 MAPRE2Q15555 327 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 FAM133BQ5BKY9 247 aaKnown RBP9.55□□□□□ -0.88
SYNE3-205ENST00000557275 HP1BP3Q5SSJ5 553 aaPredicted RBP9.55□□□□□ -0.88
SYNE3-205ENST00000557275 TRIM69Q86WT6 500 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 MBIPQ9NS73 344 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 MYL1P05976 194 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 SERPINB1P30740 379 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 SLFN12Q8IYM2 578 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 NHEJ1Q9H9Q4 299 aaPredicted RBP9.55□□□□□ -0.88
SYNE3-205ENST00000557275 ZNF500O60304 480 aaPredicted RBP9.55□□□□□ -0.88
SYNE3-205ENST00000557275 ZNF202O95125 648 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 SNRPA1P09661 255 aaKnown RBP9.55□□□□□ -0.88
SYNE3-205ENST00000557275 PMS1P54277 932 aaKnown RBP9.55□□□□□ -0.88
SYNE3-205ENST00000557275 DMP1Q13316 513 aaPredicted RBP9.55□□□□□ -0.88
SYNE3-205ENST00000557275 TRAF7Q6Q0C0 670 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 EPS8L2Q9H6S3 715 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 UVRAGQ9P2Y5 699 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 TSC22D4Q9Y3Q8 395 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 BIRC5O15392 142 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 TADA3O75528 432 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 LRMPQ12912 555 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 TAF1BQ53T94 588 aaPredicted RBP9.55□□□□□ -0.88
SYNE3-205ENST00000557275 DEPDC1Q5TB30 811 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 ACAD11Q709F0 780 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 TLK2Q86UE8 772 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 TTC17Q96AE7 1141 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 MAP3K2Q9Y2U5 619 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 PTPDC1A2A3K4 754 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 NUP62P37198 522 aaPredicted RBP9.55□□□□□ -0.88
SYNE3-205ENST00000557275 HSPA2P54652 639 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 GID8Q9NWU2 228 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 IQCA1LA6NCM1 817 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 KCNK3O14649 394 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 YARSP54577 528 aaKnown RBP9.55□□□□□ -0.88
SYNE3-205ENST00000557275 CABP1Q9NZU7 370 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 GRIN2BQ13224 1484 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 TCF3P15923 654 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 EMBQ6PCB8 327 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 TNIP2Q8NFZ5 429 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 PGBD1Q96JS3 809 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 KLC2Q9H0B6 622 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 FRMD3A2A2Y4 597 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 POLR2DO15514 142 aaKnown RBP9.55□□□□□ -0.88
SYNE3-205ENST00000557275 ORC4O43929 436 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 ADPGKQ9BRR6 497 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.55□□□□□ -0.88
SYNE3-205ENST00000557275 TP53BP2Q13625 1128 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 BSPRYQ5W0U4 402 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 MYH11P35749 1972 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 CD19P15391 556 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms