RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 USP38Q8NB14 1042 aa17■□□□□ 0.31
VRTN-202ENST00000557177 CRBNQ96SW2 442 aa17■□□□□ 0.31
VRTN-202ENST00000557177 NOC4LQ9BVI4 516 aaKnown RBP17■□□□□ 0.31
VRTN-202ENST00000557177 TRPV6Q9H1D0 765 aa17■□□□□ 0.31
VRTN-202ENST00000557177 TOMM22Q9NS69 142 aa17■□□□□ 0.31
VRTN-202ENST00000557177 ADD3Q9UEY8 706 aaKnown RBP17■□□□□ 0.31
VRTN-202ENST00000557177 FRMPD2Q68DX3 1309 aaPredicted RBP16.99■□□□□ 0.31
VRTN-202ENST00000557177 RBM47A0AV96 593 aaKnown RBP16.99■□□□□ 0.31
VRTN-202ENST00000557177 B4GALT4O60513 344 aa16.99■□□□□ 0.31
VRTN-202ENST00000557177 PSMC6P62333 389 aa16.99■□□□□ 0.31
VRTN-202ENST00000557177 CLEC4DQ8WXI8 215 aa16.99■□□□□ 0.31
VRTN-202ENST00000557177 CXXC1Q9P0U4 656 aaPredicted RBP16.99■□□□□ 0.31
VRTN-202ENST00000557177 REV3LO60673 3130 aa16.98■□□□□ 0.31
VRTN-202ENST00000557177 SNHG28P0DPA3 235 aa16.98■□□□□ 0.31
VRTN-202ENST00000557177 NMIQ13287 307 aaPredicted RBP16.98■□□□□ 0.31
VRTN-202ENST00000557177 SLC30A10Q6XR72 485 aa16.98■□□□□ 0.31
VRTN-202ENST00000557177 TTC14Q96N46 770 aa16.98■□□□□ 0.31
VRTN-202ENST00000557177 WDR11Q9BZH6 1224 aa16.98■□□□□ 0.31
VRTN-202ENST00000557177 WNT8AQ9H1J5 351 aa16.98■□□□□ 0.31
VRTN-202ENST00000557177 GPCPD1Q9NPB8 672 aa16.98■□□□□ 0.31
VRTN-202ENST00000557177 TTC28Q96AY4 2481 aa16.98■□□□□ 0.31
VRTN-202ENST00000557177 LAMA4Q16363 1823 aa16.98■□□□□ 0.31
VRTN-202ENST00000557177 CCDC171Q6TFL3 1326 aa16.97■□□□□ 0.31
VRTN-202ENST00000557177 PTPDC1A2A3K4 754 aa16.97■□□□□ 0.31
VRTN-202ENST00000557177 FGBP02675 491 aa16.97■□□□□ 0.31
VRTN-202ENST00000557177 PCP11498 1178 aaKnown RBP16.97■□□□□ 0.31
VRTN-202ENST00000557177 CCL23P55773 120 aa16.97■□□□□ 0.31
VRTN-202ENST00000557177 HAND2P61296 217 aa16.97■□□□□ 0.31
VRTN-202ENST00000557177 ZNF543Q08ER8 600 aa16.97■□□□□ 0.31
VRTN-202ENST00000557177 AKNAD1Q5T1N1 836 aa16.97■□□□□ 0.31
VRTN-202ENST00000557177 TBC1D10CQ8IV04 446 aa16.97■□□□□ 0.31
VRTN-202ENST00000557177 VWCEQ96DN2 955 aa16.97■□□□□ 0.31
VRTN-202ENST00000557177 ALDH8A1Q9H2A2 487 aaPredicted RBP16.97■□□□□ 0.31
VRTN-202ENST00000557177 MTIF3Q9H2K0 278 aaKnown RBP16.97■□□□□ 0.31
VRTN-202ENST00000557177 PNMA2Q9UL42 364 aa16.97■□□□□ 0.31
VRTN-202ENST00000557177 XIRP2A4UGR9 3374 aa16.97■□□□□ 0.31
VRTN-202ENST00000557177 TRANK1O15050 2925 aa16.97■□□□□ 0.31
VRTN-202ENST00000557177 SCN10AQ9Y5Y9 1956 aa16.97■□□□□ 0.31
VRTN-202ENST00000557177 WDR19Q8NEZ3 1342 aa16.96■□□□□ 0.31
VRTN-202ENST00000557177 EDNRBP24530 442 aa16.96■□□□□ 0.31
VRTN-202ENST00000557177 PURAQ00577 322 aaKnown RBP16.96■□□□□ 0.31
VRTN-202ENST00000557177 RAB30Q15771 203 aa16.96■□□□□ 0.31
VRTN-202ENST00000557177 RNF207Q6ZRF8 634 aa16.96■□□□□ 0.31
VRTN-202ENST00000557177 POLR3EQ9NVU0 708 aa16.96■□□□□ 0.31
VRTN-202ENST00000557177 CALML3P27482 149 aa16.95■□□□□ 0.3
VRTN-202ENST00000557177 CPT1AP50416 773 aa16.95■□□□□ 0.3
VRTN-202ENST00000557177 RPS6P62753 249 aaKnown RBP16.95■□□□□ 0.3
VRTN-202ENST00000557177 MFSD6Q6ZSS7 791 aa16.95■□□□□ 0.3
VRTN-202ENST00000557177 OTOP2Q7RTS6 562 aa16.95■□□□□ 0.3
VRTN-202ENST00000557177 GAS2L1Q99501 681 aaPredicted RBP16.95■□□□□ 0.3
VRTN-202ENST00000557177 LNPKQ9C0E8 428 aa16.95■□□□□ 0.3
VRTN-202ENST00000557177 PRDM12Q9H4Q4 367 aa16.95■□□□□ 0.3
VRTN-202ENST00000557177 MSRAQ9UJ68 235 aa16.95■□□□□ 0.3
VRTN-202ENST00000557177 NEDD4P46934 1319 aa16.95■□□□□ 0.3
VRTN-202ENST00000557177 TRIM6-TRIM34B2RNG4 842 aa16.94■□□□□ 0.3
VRTN-202ENST00000557177 DNERQ8NFT8 737 aa16.94■□□□□ 0.3
VRTN-202ENST00000557177 OR6J1Q8NGC5 347 aa16.94■□□□□ 0.3
VRTN-202ENST00000557177 SYMPKQ92797 1274 aaKnown RBP16.94■□□□□ 0.3
VRTN-202ENST00000557177 SCLYQ96I15 445 aa16.94■□□□□ 0.3
VRTN-202ENST00000557177 TRMT13Q9NUP7 481 aaKnown RBP16.94■□□□□ 0.3
VRTN-202ENST00000557177 YBX2Q9Y2T7 364 aaKnown RBP16.94■□□□□ 0.3
VRTN-202ENST00000557177 TNKSO95271 1327 aa16.94■□□□□ 0.3
VRTN-202ENST00000557177 TANC1Q9C0D5 1861 aa16.93■□□□□ 0.3
VRTN-202ENST00000557177 SCN5AQ14524 2016 aa16.93■□□□□ 0.3
VRTN-202ENST00000557177 NKRFO15226 690 aaKnown RBP eCLIP16.93■□□□□ 0.3
VRTN-202ENST00000557177 SUPT20HL2P0C7V6 817 aa16.93■□□□□ 0.3
VRTN-202ENST00000557177 PDE4DQ08499 809 aa16.93■□□□□ 0.3
VRTN-202ENST00000557177 ADGRE1Q14246 886 aa16.93■□□□□ 0.3
VRTN-202ENST00000557177 PPP2R5BQ15173 497 aa16.93■□□□□ 0.3
VRTN-202ENST00000557177 TJAP1Q5JTD0 557 aa16.93■□□□□ 0.3
VRTN-202ENST00000557177 GPATCH4Q5T3I0 446 aaKnown RBP16.93■□□□□ 0.3
VRTN-202ENST00000557177 DGKHQ86XP1 1220 aa16.93■□□□□ 0.3
VRTN-202ENST00000557177 SMC5Q8IY18 1101 aa16.93■□□□□ 0.3
VRTN-202ENST00000557177 RPUSD2Q8IZ73 545 aaKnown RBP16.93■□□□□ 0.3
VRTN-202ENST00000557177 SCFD2Q8WU76 684 aa16.93■□□□□ 0.3
VRTN-202ENST00000557177 RILPL2Q969X0 211 aa16.93■□□□□ 0.3
VRTN-202ENST00000557177 MTG1Q9BT17 334 aaPredicted RBP16.93■□□□□ 0.3
VRTN-202ENST00000557177 NKX2-4Q9H2Z4 354 aa16.93■□□□□ 0.3
VRTN-202ENST00000557177 RNF41Q9H4P4 317 aaPredicted RBP16.93■□□□□ 0.3
VRTN-202ENST00000557177 MYO9BQ13459 2157 aa16.92■□□□□ 0.3
VRTN-202ENST00000557177 A6NJR5 290 aa16.92■□□□□ 0.3
VRTN-202ENST00000557177 PFKMP08237 780 aa16.92■□□□□ 0.3
VRTN-202ENST00000557177 MYL3P08590 195 aa16.92■□□□□ 0.3
VRTN-202ENST00000557177 CYP2C9P11712 490 aa16.92■□□□□ 0.3
VRTN-202ENST00000557177 SDSP20132 328 aa16.92■□□□□ 0.3
VRTN-202ENST00000557177 NT5C2P49902 561 aa16.92■□□□□ 0.3
VRTN-202ENST00000557177 MFAP1P55081 439 aaKnown RBP16.92■□□□□ 0.3
VRTN-202ENST00000557177 RGS22Q8NE09 1264 aa16.92■□□□□ 0.3
VRTN-202ENST00000557177 ESR2Q92731 530 aa16.92■□□□□ 0.3
VRTN-202ENST00000557177 MPHOSPH6Q99547 160 aaKnown RBP16.92■□□□□ 0.3
VRTN-202ENST00000557177 OSBPL3Q9H4L5 887 aa16.92■□□□□ 0.3
VRTN-202ENST00000557177 SLC28A3Q9HAS3 691 aa16.92■□□□□ 0.3
VRTN-202ENST00000557177 PRDM6Q9NQX0 595 aa16.92■□□□□ 0.3
VRTN-202ENST00000557177 RAD50Q92878 1312 aa16.92■□□□□ 0.3
VRTN-202ENST00000557177 GOLGA8HP0CJ92 632 aa16.91■□□□□ 0.3
VRTN-202ENST00000557177 AAMPQ13685 434 aa16.91■□□□□ 0.3
VRTN-202ENST00000557177 NBPF20Q3BBV1 942 aa16.91■□□□□ 0.3
VRTN-202ENST00000557177 NFRKBQ6P4R8 1299 aa16.91■□□□□ 0.3
VRTN-202ENST00000557177 COPS5Q92905 334 aa16.91■□□□□ 0.3
VRTN-202ENST00000557177 ZKSCAN3Q9BRR0 538 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms